Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Gm8649-201ENSMUST00000181799 233 ntBASIC2.16□□□□□ -2.06
Trav6-1A0A075B5Z8 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trav6-1A0A075B5Z8 Gm6140-201ENSMUST00000192494 966 ntBASIC2.16□□□□□ -2.06
Trav6-1A0A075B5Z8 Gm32340-201ENSMUST00000192883 259 ntBASIC2.16□□□□□ -2.06
Trav6-1A0A075B5Z8 Gm43043-201ENSMUST00000196579 412 ntBASIC2.16□□□□□ -2.06
Trav6-1A0A075B5Z8 Gm35570-201ENSMUST00000198730 681 ntBASIC2.16□□□□□ -2.06
Trav6-1A0A075B5Z8 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC2.16□□□□□ -2.06
Trav6-1A0A075B5Z8 Gm32381-201ENSMUST00000203192 476 ntBASIC2.16□□□□□ -2.06
Trav6-1A0A075B5Z8 Gm44925-201ENSMUST00000208879 2110 ntBASIC2.16□□□□□ -2.06
Trav6-1A0A075B5Z8 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC2.16□□□□□ -2.06
Trav6-1A0A075B5Z8 Gm9765-201ENSMUST00000043170 321 ntBASIC2.16□□□□□ -2.06
Trav6-1A0A075B5Z8 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Trav6-1A0A075B5Z8 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Trav6-1A0A075B5Z8 Gm25008-201ENSMUST00000083809 81 ntBASIC2.16□□□□□ -2.06
Trav6-1A0A075B5Z8 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.16□□□□□ -2.06
Trav6-1A0A075B5Z8 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Trav6-1A0A075B5Z8 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trav6-1A0A075B5Z8 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trav6-1A0A075B5Z8 AC164297.4-201ENSMUST00000224225 1307 ntBASIC2.16□□□□□ -2.06
Trav6-1A0A075B5Z8 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
Trav6-1A0A075B5Z8 Gm43404-201ENSMUST00000200424 2534 ntBASIC2.15□□□□□ -2.07
Trav6-1A0A075B5Z8 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC2.15□□□□□ -2.07
Trav6-1A0A075B5Z8 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.07
Trav6-1A0A075B5Z8 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Trav6-1A0A075B5Z8 Gm24376-201ENSMUST00000104399 127 ntBASIC2.15□□□□□ -2.07
Trav6-1A0A075B5Z8 Gm13082-201ENSMUST00000118877 561 ntBASIC2.15□□□□□ -2.07
Trav6-1A0A075B5Z8 Gm14128-201ENSMUST00000119514 1011 ntBASIC2.15□□□□□ -2.07
Trav6-1A0A075B5Z8 Gm14506-201ENSMUST00000121165 536 ntBASIC2.15□□□□□ -2.07
Trav6-1A0A075B5Z8 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC2.15□□□□□ -2.07
Trav6-1A0A075B5Z8 Gm24787-201ENSMUST00000157380 123 ntBASIC2.15□□□□□ -2.07
Trav6-1A0A075B5Z8 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Trav6-1A0A075B5Z8 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC2.15□□□□□ -2.07
Trav6-1A0A075B5Z8 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.15□□□□□ -2.07
Trav6-1A0A075B5Z8 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Trav6-1A0A075B5Z8 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC2.15□□□□□ -2.07
Trav6-1A0A075B5Z8 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC2.15□□□□□ -2.07
Trav6-1A0A075B5Z8 Gm44513-201ENSMUST00000206811 439 ntBASIC2.15□□□□□ -2.07
Trav6-1A0A075B5Z8 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC2.15□□□□□ -2.07
Trav6-1A0A075B5Z8 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC2.15□□□□□ -2.07
Trav6-1A0A075B5Z8 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.15□□□□□ -2.07
Trav6-1A0A075B5Z8 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Trav6-1A0A075B5Z8 AC150560.3-201ENSMUST00000227442 455 ntBASIC2.15□□□□□ -2.07
Trav6-1A0A075B5Z8 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Trav6-1A0A075B5Z8 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
Trav6-1A0A075B5Z8 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Trav6-1A0A075B5Z8 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC2.15□□□□□ -2.07
Trav6-1A0A075B5Z8 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Trav6-1A0A075B5Z8 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 Gm8473-201ENSMUST00000176697 1885 ntBASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 Snora36b-201ENSMUST00000104383 132 ntBASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 Gm14579-201ENSMUST00000117068 283 ntBASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 Gm13614-201ENSMUST00000117306 503 ntBASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 Gm14566-201ENSMUST00000118915 321 ntBASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 Gm24436-201ENSMUST00000157889 302 ntBASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 Gm25334-201ENSMUST00000158036 110 ntBASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 Gm25557-201ENSMUST00000158084 315 ntBASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 Gm24968-201ENSMUST00000179817 107 ntBASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 Gm27999-201ENSMUST00000183539 193 ntBASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 Mir6363-201ENSMUST00000184880 114 ntBASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 Gm29597-201ENSMUST00000188035 308 ntBASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 Gm29288-201ENSMUST00000191582 901 ntBASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 Trbv12-3-201ENSMUST00000192675 372 ntBASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 Ighv1-6-201ENSMUST00000193849 293 ntBASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 Gm37807-201ENSMUST00000194310 190 ntBASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 Gm43115-201ENSMUST00000196244 160 ntBASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 Gm43239-201ENSMUST00000200131 201 ntBASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 Gm17893-201ENSMUST00000203017 770 ntBASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 Gm45513-201ENSMUST00000210228 376 ntBASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 Gm7948-201ENSMUST00000212607 844 ntBASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 AL929285.1-201ENSMUST00000215522 229 ntBASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 Gm18729-201ENSMUST00000217230 621 ntBASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 AC154636.3-201ENSMUST00000221489 1214 ntBASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 AC120540.1-201ENSMUST00000221879 324 ntBASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 AC126275.2-201ENSMUST00000225224 253 ntBASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 AC168062.2-201ENSMUST00000228907 422 ntBASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 Gm10088-201ENSMUST00000074116 423 ntBASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 Gm10038-201ENSMUST00000077233 441 ntBASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 Gm24446-201ENSMUST00000083982 156 ntBASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 Gm45039-201ENSMUST00000209181 3477 ntBASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.14□□□□□ -2.07
Trav6-1A0A075B5Z8 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Trav6-1A0A075B5Z8 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Trav6-1A0A075B5Z8 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Trav6-1A0A075B5Z8 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
Trav6-1A0A075B5Z8 Gm23577-201ENSMUST00000103950 110 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms