Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC3.09□□□□□ -1.91
H2afb1S4R1E0 Gm25480-201ENSMUST00000083217 133 ntBASIC3.09□□□□□ -1.91
H2afb1S4R1E0 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
H2afb1S4R1E0 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
H2afb1S4R1E0 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
H2afb1S4R1E0 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
H2afb1S4R1E0 AC124426.1-203ENSMUST00000221814 1362 ntBASIC3.09□□□□□ -1.92
H2afb1S4R1E0 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
H2afb1S4R1E0 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
H2afb1S4R1E0 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
H2afb1S4R1E0 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.08□□□□□ -1.92
H2afb1S4R1E0 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.08□□□□□ -1.92
H2afb1S4R1E0 Mir667-201ENSMUST00000102441 92 ntBASIC3.08□□□□□ -1.92
H2afb1S4R1E0 Gm14981-201ENSMUST00000117325 943 ntBASIC3.08□□□□□ -1.92
H2afb1S4R1E0 Gm14793-201ENSMUST00000118739 311 ntBASIC3.08□□□□□ -1.92
H2afb1S4R1E0 Gm15060-201ENSMUST00000119550 948 ntBASIC3.08□□□□□ -1.92
H2afb1S4R1E0 Gm11410-201ENSMUST00000120053 1143 ntBASIC3.08□□□□□ -1.92
H2afb1S4R1E0 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC3.08□□□□□ -1.92
H2afb1S4R1E0 Gm13692-201ENSMUST00000120774 371 ntBASIC3.08□□□□□ -1.92
H2afb1S4R1E0 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC3.08□□□□□ -1.92
H2afb1S4R1E0 n-R5s207-201ENSMUST00000122497 118 ntBASIC3.08□□□□□ -1.92
H2afb1S4R1E0 Gm23167-201ENSMUST00000157155 103 ntBASIC3.08□□□□□ -1.92
H2afb1S4R1E0 Gm22840-201ENSMUST00000158444 136 ntBASIC3.08□□□□□ -1.92
H2afb1S4R1E0 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
H2afb1S4R1E0 Gm24315-201ENSMUST00000177835 127 ntBASIC3.08□□□□□ -1.92
H2afb1S4R1E0 Gm23379-201ENSMUST00000180026 107 ntBASIC3.08□□□□□ -1.92
H2afb1S4R1E0 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC3.08□□□□□ -1.92
H2afb1S4R1E0 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC3.08□□□□□ -1.92
H2afb1S4R1E0 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.08□□□□□ -1.92
H2afb1S4R1E0 Gm38075-201ENSMUST00000191979 920 ntBASIC3.08□□□□□ -1.92
H2afb1S4R1E0 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC3.08□□□□□ -1.92
H2afb1S4R1E0 Gm45439-201ENSMUST00000211723 359 ntBASIC3.08□□□□□ -1.92
H2afb1S4R1E0 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC3.08□□□□□ -1.92
H2afb1S4R1E0 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC3.08□□□□□ -1.92
H2afb1S4R1E0 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
H2afb1S4R1E0 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
H2afb1S4R1E0 CT010480.5-201ENSMUST00000225026 217 ntBASIC3.08□□□□□ -1.92
H2afb1S4R1E0 AC126275.2-201ENSMUST00000225224 253 ntBASIC3.08□□□□□ -1.92
H2afb1S4R1E0 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
H2afb1S4R1E0 AC109172.2-201ENSMUST00000228792 381 ntBASIC3.08□□□□□ -1.92
H2afb1S4R1E0 Gm10088-201ENSMUST00000074116 423 ntBASIC3.08□□□□□ -1.92
H2afb1S4R1E0 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
H2afb1S4R1E0 Gm23503-201ENSMUST00000083903 107 ntBASIC3.08□□□□□ -1.92
H2afb1S4R1E0 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
H2afb1S4R1E0 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
H2afb1S4R1E0 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
H2afb1S4R1E0 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
H2afb1S4R1E0 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
H2afb1S4R1E0 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
H2afb1S4R1E0 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.07□□□□□ -1.92
H2afb1S4R1E0 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
H2afb1S4R1E0 Mir465c-2-201ENSMUST00000104757 81 ntBASIC3.07□□□□□ -1.92
H2afb1S4R1E0 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC3.07□□□□□ -1.92
H2afb1S4R1E0 Gm11352-201ENSMUST00000119264 517 ntBASIC3.07□□□□□ -1.92
H2afb1S4R1E0 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.07□□□□□ -1.92
H2afb1S4R1E0 Gm13273-201ENSMUST00000119737 159 ntBASIC3.07□□□□□ -1.92
H2afb1S4R1E0 Gm12739-201ENSMUST00000119769 382 ntBASIC3.07□□□□□ -1.92
H2afb1S4R1E0 Gm12006-201ENSMUST00000120786 403 ntBASIC3.07□□□□□ -1.92
H2afb1S4R1E0 Gm11414-201ENSMUST00000121795 263 ntBASIC3.07□□□□□ -1.92
H2afb1S4R1E0 Gm23463-201ENSMUST00000122468 99 ntBASIC3.07□□□□□ -1.92
H2afb1S4R1E0 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
H2afb1S4R1E0 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC3.07□□□□□ -1.92
H2afb1S4R1E0 Gm22034-201ENSMUST00000157283 134 ntBASIC3.07□□□□□ -1.92
H2afb1S4R1E0 Gm23666-201ENSMUST00000158053 116 ntBASIC3.07□□□□□ -1.92
H2afb1S4R1E0 Gm16353-201ENSMUST00000159458 1223 ntBASIC3.07□□□□□ -1.92
H2afb1S4R1E0 Gm4479-201ENSMUST00000178807 171 ntBASIC3.07□□□□□ -1.92
H2afb1S4R1E0 Mir6986-201ENSMUST00000184483 58 ntBASIC3.07□□□□□ -1.92
H2afb1S4R1E0 Gm27477-201ENSMUST00000184649 143 ntBASIC3.07□□□□□ -1.92
H2afb1S4R1E0 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
H2afb1S4R1E0 Gm28597-201ENSMUST00000187664 666 ntBASIC3.07□□□□□ -1.92
H2afb1S4R1E0 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
H2afb1S4R1E0 Gm37701-201ENSMUST00000192947 1100 ntBASIC3.07□□□□□ -1.92
H2afb1S4R1E0 Mir129b-201ENSMUST00000197461 65 ntBASIC3.07□□□□□ -1.92
H2afb1S4R1E0 Gm44513-201ENSMUST00000206811 439 ntBASIC3.07□□□□□ -1.92
H2afb1S4R1E0 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC3.07□□□□□ -1.92
H2afb1S4R1E0 Gm9068-201ENSMUST00000217393 455 ntBASIC3.07□□□□□ -1.92
H2afb1S4R1E0 AC116726.2-201ENSMUST00000217629 986 ntBASIC3.07□□□□□ -1.92
H2afb1S4R1E0 Gm20304-201ENSMUST00000218168 444 ntBASIC3.07□□□□□ -1.92
H2afb1S4R1E0 Gm17890-201ENSMUST00000221419 757 ntBASIC3.07□□□□□ -1.92
H2afb1S4R1E0 AC124562.1-201ENSMUST00000224673 337 ntBASIC3.07□□□□□ -1.92
H2afb1S4R1E0 AC154426.1-201ENSMUST00000225614 1132 ntBASIC3.07□□□□□ -1.92
H2afb1S4R1E0 AC112972.1-201ENSMUST00000227329 365 ntBASIC3.07□□□□□ -1.92
H2afb1S4R1E0 AC107453.2-201ENSMUST00000227714 655 ntBASIC3.07□□□□□ -1.92
H2afb1S4R1E0 n-R5s50-201ENSMUST00000083168 111 ntBASIC3.07□□□□□ -1.92
H2afb1S4R1E0 Gm25792-201ENSMUST00000083289 100 ntBASIC3.07□□□□□ -1.92
H2afb1S4R1E0 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
H2afb1S4R1E0 Mir465c-1-201ENSMUST00000093560 81 ntBASIC3.07□□□□□ -1.92
H2afb1S4R1E0 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
H2afb1S4R1E0 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
H2afb1S4R1E0 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
H2afb1S4R1E0 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
H2afb1S4R1E0 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
H2afb1S4R1E0 Gm25088-201ENSMUST00000101803 79 ntBASIC3.06□□□□□ -1.92
H2afb1S4R1E0 Mir693-201ENSMUST00000102187 89 ntBASIC3.06□□□□□ -1.92
H2afb1S4R1E0 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
H2afb1S4R1E0 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
H2afb1S4R1E0 Gm13614-201ENSMUST00000117306 503 ntBASIC3.06□□□□□ -1.92
H2afb1S4R1E0 Gm11367-201ENSMUST00000117802 120 ntBASIC3.06□□□□□ -1.92
H2afb1S4R1E0 Gm13454-201ENSMUST00000118166 483 ntBASIC3.06□□□□□ -1.92
H2afb1S4R1E0 Gm14627-201ENSMUST00000118931 567 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms