Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
Nubp1Q9R060 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Nubp1Q9R060 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC5.07□□□□□ -1.6
Nubp1Q9R060 Gm8595-201ENSMUST00000118250 630 ntBASIC5.07□□□□□ -1.6
Nubp1Q9R060 Gm14782-201ENSMUST00000120151 195 ntBASIC5.07□□□□□ -1.6
Nubp1Q9R060 Gm23641-201ENSMUST00000157857 101 ntBASIC5.07□□□□□ -1.6
Nubp1Q9R060 Gm26045-201ENSMUST00000157862 97 ntBASIC5.07□□□□□ -1.6
Nubp1Q9R060 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Nubp1Q9R060 Gm22122-201ENSMUST00000175147 200 ntBASIC5.07□□□□□ -1.6
Nubp1Q9R060 Mir6383-201ENSMUST00000184545 116 ntBASIC5.07□□□□□ -1.6
Nubp1Q9R060 Gm44520-201ENSMUST00000205447 802 ntBASIC5.07□□□□□ -1.6
Nubp1Q9R060 AC140785.1-201ENSMUST00000217782 383 ntBASIC5.07□□□□□ -1.6
Nubp1Q9R060 Gm40810-201ENSMUST00000219149 253 ntBASIC5.07□□□□□ -1.6
Nubp1Q9R060 CT030182.2-201ENSMUST00000223569 620 ntBASIC5.07□□□□□ -1.6
Nubp1Q9R060 CT009713.4-201ENSMUST00000224246 272 ntBASIC5.07□□□□□ -1.6
Nubp1Q9R060 AC133189.2-201ENSMUST00000228527 392 ntBASIC5.07□□□□□ -1.6
Nubp1Q9R060 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Nubp1Q9R060 Gm22247-201ENSMUST00000082476 131 ntBASIC5.07□□□□□ -1.6
Nubp1Q9R060 Gm24204-201ENSMUST00000082950 107 ntBASIC5.07□□□□□ -1.6
Nubp1Q9R060 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC5.07□□□□□ -1.6
Nubp1Q9R060 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Nubp1Q9R060 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Nubp1Q9R060 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Nubp1Q9R060 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Nubp1Q9R060 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Nubp1Q9R060 Gm43085-201ENSMUST00000202859 3132 ntBASIC5.07□□□□□ -1.6
Nubp1Q9R060 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Nubp1Q9R060 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Nubp1Q9R060 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
Nubp1Q9R060 Gm44068-201ENSMUST00000204049 2128 ntBASIC5.06□□□□□ -1.6
Nubp1Q9R060 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Nubp1Q9R060 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Nubp1Q9R060 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Nubp1Q9R060 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Nubp1Q9R060 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Nubp1Q9R060 Gm44440-201ENSMUST00000203139 2373 ntBASIC5.06□□□□□ -1.6
Nubp1Q9R060 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Nubp1Q9R060 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
Nubp1Q9R060 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Nubp1Q9R060 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Nubp1Q9R060 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Nubp1Q9R060 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Nubp1Q9R060 Gm37296-201ENSMUST00000192728 2922 ntBASIC5.06□□□□□ -1.6
Nubp1Q9R060 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC5.06□□□□□ -1.6
Nubp1Q9R060 Gm24282-201ENSMUST00000104232 66 ntBASIC5.06□□□□□ -1.6
Nubp1Q9R060 Gm22499-201ENSMUST00000104501 135 ntBASIC5.06□□□□□ -1.6
Nubp1Q9R060 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Nubp1Q9R060 Gm14871-201ENSMUST00000119056 194 ntBASIC5.06□□□□□ -1.6
Nubp1Q9R060 Gm14748-201ENSMUST00000119819 411 ntBASIC5.06□□□□□ -1.6
Nubp1Q9R060 Gm14619-201ENSMUST00000120480 168 ntBASIC5.06□□□□□ -1.6
Nubp1Q9R060 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC5.06□□□□□ -1.6
Nubp1Q9R060 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC5.06□□□□□ -1.6
Nubp1Q9R060 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC5.06□□□□□ -1.6
Nubp1Q9R060 Gm23513-201ENSMUST00000158181 133 ntBASIC5.06□□□□□ -1.6
Nubp1Q9R060 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Nubp1Q9R060 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC5.06□□□□□ -1.6
Nubp1Q9R060 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC5.06□□□□□ -1.6
Nubp1Q9R060 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC5.06□□□□□ -1.6
Nubp1Q9R060 Gm28685-201ENSMUST00000187545 1101 ntBASIC5.06□□□□□ -1.6
Nubp1Q9R060 Gm28429-201ENSMUST00000188521 363 ntBASIC5.06□□□□□ -1.6
Nubp1Q9R060 Gm19901-201ENSMUST00000192191 495 ntBASIC5.06□□□□□ -1.6
Nubp1Q9R060 Gm8599-201ENSMUST00000193033 457 ntBASIC5.06□□□□□ -1.6
Nubp1Q9R060 Gm9238-201ENSMUST00000196181 329 ntBASIC5.06□□□□□ -1.6
Nubp1Q9R060 Gm44494-201ENSMUST00000196760 129 ntBASIC5.06□□□□□ -1.6
Nubp1Q9R060 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC5.06□□□□□ -1.6
Nubp1Q9R060 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC5.06□□□□□ -1.6
Nubp1Q9R060 Gm9616-201ENSMUST00000221154 781 ntBASIC5.06□□□□□ -1.6
Nubp1Q9R060 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC5.06□□□□□ -1.6
Nubp1Q9R060 AC165347.1-201ENSMUST00000224089 1025 ntBASIC5.06□□□□□ -1.6
Nubp1Q9R060 Gm23737-201ENSMUST00000082547 159 ntBASIC5.06□□□□□ -1.6
Nubp1Q9R060 Gm23138-201ENSMUST00000083365 103 ntBASIC5.06□□□□□ -1.6
Nubp1Q9R060 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Nubp1Q9R060 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Nubp1Q9R060 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Nubp1Q9R060 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Nubp1Q9R060 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC5.06□□□□□ -1.6
Nubp1Q9R060 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Nubp1Q9R060 Gm43426-201ENSMUST00000197287 2597 ntBASIC5.06□□□□□ -1.6
Nubp1Q9R060 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Nubp1Q9R060 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Nubp1Q9R060 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Nubp1Q9R060 Gm6645-201ENSMUST00000118505 2726 ntBASIC5.05□□□□□ -1.6
Nubp1Q9R060 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
Nubp1Q9R060 Gm45662-201ENSMUST00000210054 2098 ntBASIC5.05□□□□□ -1.6
Nubp1Q9R060 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Nubp1Q9R060 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Nubp1Q9R060 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Nubp1Q9R060 Gm24263-201ENSMUST00000104059 107 ntBASIC5.05□□□□□ -1.6
Nubp1Q9R060 Gm25421-201ENSMUST00000104218 164 ntBASIC5.05□□□□□ -1.6
Nubp1Q9R060 Gm15613-201ENSMUST00000118396 326 ntBASIC5.05□□□□□ -1.6
Nubp1Q9R060 Gm12550-201ENSMUST00000118478 329 ntBASIC5.05□□□□□ -1.6
Nubp1Q9R060 Gm12488-201ENSMUST00000122449 499 ntBASIC5.05□□□□□ -1.6
Nubp1Q9R060 n-R5s21-201ENSMUST00000122692 117 ntBASIC5.05□□□□□ -1.6
Nubp1Q9R060 Gm26291-201ENSMUST00000158889 137 ntBASIC5.05□□□□□ -1.6
Nubp1Q9R060 Gm25935-201ENSMUST00000178746 107 ntBASIC5.05□□□□□ -1.6
Nubp1Q9R060 Mir6539-201ENSMUST00000183732 110 ntBASIC5.05□□□□□ -1.6
Nubp1Q9R060 Mir7031-201ENSMUST00000183860 65 ntBASIC5.05□□□□□ -1.6
Nubp1Q9R060 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC5.05□□□□□ -1.6
Nubp1Q9R060 Gm18444-201ENSMUST00000191239 629 ntBASIC5.05□□□□□ -1.6
Nubp1Q9R060 Gm7182-201ENSMUST00000193351 732 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms