Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC2.55□□□□□ -2
Scn11aQ9R053 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC2.55□□□□□ -2
Scn11aQ9R053 Gm43662-201ENSMUST00000198310 2271 ntBASIC2.55□□□□□ -2
Scn11aQ9R053 Gm17969-201ENSMUST00000185706 2557 ntBASIC2.55□□□□□ -2
Scn11aQ9R053 Gm27013-202ENSMUST00000205067 1436 ntBASIC2.55□□□□□ -2
Scn11aQ9R053 Gm19074-201ENSMUST00000218915 1429 ntBASIC2.55□□□□□ -2
Scn11aQ9R053 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC2.54□□□□□ -2
Scn11aQ9R053 Gm22517-201ENSMUST00000158265 136 ntBASIC2.54□□□□□ -2
Scn11aQ9R053 Gm25044-201ENSMUST00000158603 104 ntBASIC2.54□□□□□ -2
Scn11aQ9R053 Gm23005-201ENSMUST00000158950 136 ntBASIC2.54□□□□□ -2
Scn11aQ9R053 Gm27668-201ENSMUST00000184188 120 ntBASIC2.54□□□□□ -2
Scn11aQ9R053 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Scn11aQ9R053 Gm36960-201ENSMUST00000195491 2035 ntBASIC2.54□□□□□ -2
Scn11aQ9R053 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Scn11aQ9R053 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
Scn11aQ9R053 Gm23642-201ENSMUST00000157858 258 ntBASIC2.54□□□□□ -2
Scn11aQ9R053 Gm6486-201ENSMUST00000166202 434 ntBASIC2.54□□□□□ -2
Scn11aQ9R053 Mir6352-201ENSMUST00000184495 116 ntBASIC2.54□□□□□ -2
Scn11aQ9R053 Gm37037-201ENSMUST00000194475 424 ntBASIC2.54□□□□□ -2
Scn11aQ9R053 Mir1892-201ENSMUST00000197752 80 ntBASIC2.54□□□□□ -2
Scn11aQ9R053 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC2.54□□□□□ -2
Scn11aQ9R053 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Scn11aQ9R053 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Scn11aQ9R053 Gm23256-201ENSMUST00000102235 110 ntBASIC2.53□□□□□ -2
Scn11aQ9R053 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC2.53□□□□□ -2
Scn11aQ9R053 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC2.53□□□□□ -2
Scn11aQ9R053 Gm23109-201ENSMUST00000116867 126 ntBASIC2.53□□□□□ -2
Scn11aQ9R053 Gm12495-201ENSMUST00000119750 447 ntBASIC2.53□□□□□ -2
Scn11aQ9R053 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC2.53□□□□□ -2
Scn11aQ9R053 Gm23342-201ENSMUST00000158958 115 ntBASIC2.53□□□□□ -2
Scn11aQ9R053 Mir6405-201ENSMUST00000184584 124 ntBASIC2.53□□□□□ -2
Scn11aQ9R053 Gm27952-201ENSMUST00000184748 105 ntBASIC2.53□□□□□ -2
Scn11aQ9R053 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Scn11aQ9R053 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC2.53□□□□□ -2
Scn11aQ9R053 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC2.53□□□□□ -2
Scn11aQ9R053 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Scn11aQ9R053 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
Scn11aQ9R053 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.52□□□□□ -2.01
Scn11aQ9R053 AC164629.4-201ENSMUST00000218505 3247 ntBASIC2.52□□□□□ -2.01
Scn11aQ9R053 Gm9009-201ENSMUST00000117321 326 ntBASIC2.52□□□□□ -2.01
Scn11aQ9R053 Gm11430-201ENSMUST00000121317 217 ntBASIC2.52□□□□□ -2.01
Scn11aQ9R053 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.52□□□□□ -2.01
Scn11aQ9R053 Gm3496-201ENSMUST00000188283 745 ntBASIC2.52□□□□□ -2.01
Scn11aQ9R053 Gm28650-201ENSMUST00000188413 411 ntBASIC2.52□□□□□ -2.01
Scn11aQ9R053 Gm37550-201ENSMUST00000193230 463 ntBASIC2.52□□□□□ -2.01
Scn11aQ9R053 Gm43239-201ENSMUST00000200131 201 ntBASIC2.52□□□□□ -2.01
Scn11aQ9R053 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Scn11aQ9R053 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Scn11aQ9R053 Gm12513-201ENSMUST00000118617 352 ntBASIC2.51□□□□□ -2.01
Scn11aQ9R053 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC2.51□□□□□ -2.01
Scn11aQ9R053 Gm26345-201ENSMUST00000157534 120 ntBASIC2.51□□□□□ -2.01
Scn11aQ9R053 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Scn11aQ9R053 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC2.51□□□□□ -2.01
Scn11aQ9R053 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Scn11aQ9R053 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Scn11aQ9R053 AC158805.1-201ENSMUST00000218197 2631 ntBASIC2.51□□□□□ -2.01
Scn11aQ9R053 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
Scn11aQ9R053 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Scn11aQ9R053 Gm42448-201ENSMUST00000197122 2644 ntBASIC2.51□□□□□ -2.01
Scn11aQ9R053 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Scn11aQ9R053 Gm25170-201ENSMUST00000104191 129 ntBASIC2.51□□□□□ -2.01
Scn11aQ9R053 Gm15900-201ENSMUST00000161584 342 ntBASIC2.51□□□□□ -2.01
Scn11aQ9R053 Trbv22-201ENSMUST00000191697 291 ntBASIC2.51□□□□□ -2.01
Scn11aQ9R053 Trbv18-201ENSMUST00000194256 294 ntBASIC2.51□□□□□ -2.01
Scn11aQ9R053 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC2.51□□□□□ -2.01
Scn11aQ9R053 AC157570.3-201ENSMUST00000219281 205 ntBASIC2.51□□□□□ -2.01
Scn11aQ9R053 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Scn11aQ9R053 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Scn11aQ9R053 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Scn11aQ9R053 Gm25274-201ENSMUST00000104296 135 ntBASIC2.5□□□□□ -2.01
Scn11aQ9R053 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC2.5□□□□□ -2.01
Scn11aQ9R053 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC2.5□□□□□ -2.01
Scn11aQ9R053 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
Scn11aQ9R053 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC2.5□□□□□ -2.01
Scn11aQ9R053 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC2.5□□□□□ -2.01
Scn11aQ9R053 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC2.5□□□□□ -2.01
Scn11aQ9R053 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Scn11aQ9R053 Gm28404-201ENSMUST00000190242 453 ntBASIC2.5□□□□□ -2.01
Scn11aQ9R053 Gm29552-201ENSMUST00000190548 660 ntBASIC2.5□□□□□ -2.01
Scn11aQ9R053 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.5□□□□□ -2.01
Scn11aQ9R053 Gm23447-201ENSMUST00000082798 163 ntBASIC2.5□□□□□ -2.01
Scn11aQ9R053 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Scn11aQ9R053 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Scn11aQ9R053 Gm24098-201ENSMUST00000102075 109 ntBASIC2.49□□□□□ -2.01
Scn11aQ9R053 Gm25381-201ENSMUST00000102078 109 ntBASIC2.49□□□□□ -2.01
Scn11aQ9R053 Gm26080-201ENSMUST00000104069 131 ntBASIC2.49□□□□□ -2.01
Scn11aQ9R053 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Scn11aQ9R053 Mir8118-201ENSMUST00000183962 129 ntBASIC2.49□□□□□ -2.01
Scn11aQ9R053 Gm37290-201ENSMUST00000195775 339 ntBASIC2.49□□□□□ -2.01
Scn11aQ9R053 Mir7232-201ENSMUST00000197929 74 ntBASIC2.49□□□□□ -2.01
Scn11aQ9R053 Olfr1285-201ENSMUST00000208523 903 ntBASIC2.49□□□□□ -2.01
Scn11aQ9R053 Gm7530-201ENSMUST00000218466 605 ntBASIC2.49□□□□□ -2.01
Scn11aQ9R053 AC163646.2-201ENSMUST00000227962 141 ntBASIC2.49□□□□□ -2.01
Scn11aQ9R053 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Scn11aQ9R053 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Scn11aQ9R053 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Scn11aQ9R053 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Scn11aQ9R053 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Scn11aQ9R053 Gm15846-201ENSMUST00000116022 320 ntBASIC2.49□□□□□ -2.01
Scn11aQ9R053 Gm11577-201ENSMUST00000118030 737 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 93.9 ms