Protein–RNA interactions for Protein: Q9QXD8

Limd1, LIM domain-containing protein 1, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limd1Q9QXD8 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Limd1Q9QXD8 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
Limd1Q9QXD8 Gm43010-201ENSMUST00000195993 2878 ntBASIC5.58□□□□□ -1.52
Limd1Q9QXD8 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Limd1Q9QXD8 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
Limd1Q9QXD8 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Limd1Q9QXD8 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
Limd1Q9QXD8 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Limd1Q9QXD8 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Limd1Q9QXD8 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC5.57□□□□□ -1.52
Limd1Q9QXD8 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC5.57□□□□□ -1.52
Limd1Q9QXD8 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC5.57□□□□□ -1.52
Limd1Q9QXD8 Gm6265-201ENSMUST00000149263 231 ntBASIC5.57□□□□□ -1.52
Limd1Q9QXD8 Gm23752-201ENSMUST00000157584 115 ntBASIC5.57□□□□□ -1.52
Limd1Q9QXD8 Gm26362-201ENSMUST00000158865 315 ntBASIC5.57□□□□□ -1.52
Limd1Q9QXD8 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC5.57□□□□□ -1.52
Limd1Q9QXD8 Gm42663-201ENSMUST00000199883 351 ntBASIC5.57□□□□□ -1.52
Limd1Q9QXD8 Gm7652-201ENSMUST00000200440 1151 ntBASIC5.57□□□□□ -1.52
Limd1Q9QXD8 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Limd1Q9QXD8 AC154840.1-201ENSMUST00000225216 408 ntBASIC5.57□□□□□ -1.52
Limd1Q9QXD8 AC123860.1-201ENSMUST00000228033 481 ntBASIC5.57□□□□□ -1.52
Limd1Q9QXD8 CT485608.1-201ENSMUST00000228759 389 ntBASIC5.57□□□□□ -1.52
Limd1Q9QXD8 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC5.57□□□□□ -1.52
Limd1Q9QXD8 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Limd1Q9QXD8 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Limd1Q9QXD8 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Limd1Q9QXD8 Gm37868-201ENSMUST00000195578 2735 ntBASIC5.57□□□□□ -1.52
Limd1Q9QXD8 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC5.57□□□□□ -1.52
Limd1Q9QXD8 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Limd1Q9QXD8 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Limd1Q9QXD8 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Limd1Q9QXD8 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Limd1Q9QXD8 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Limd1Q9QXD8 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Limd1Q9QXD8 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
Limd1Q9QXD8 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Limd1Q9QXD8 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Limd1Q9QXD8 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Limd1Q9QXD8 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
Limd1Q9QXD8 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Limd1Q9QXD8 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Limd1Q9QXD8 Gm14086-201ENSMUST00000117152 173 ntBASIC5.56□□□□□ -1.52
Limd1Q9QXD8 Gm16032-201ENSMUST00000118534 168 ntBASIC5.56□□□□□ -1.52
Limd1Q9QXD8 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Limd1Q9QXD8 Gm15760-201ENSMUST00000119553 283 ntBASIC5.56□□□□□ -1.52
Limd1Q9QXD8 Gm15037-201ENSMUST00000120358 259 ntBASIC5.56□□□□□ -1.52
Limd1Q9QXD8 Gm14775-201ENSMUST00000122089 310 ntBASIC5.56□□□□□ -1.52
Limd1Q9QXD8 Gm25103-201ENSMUST00000122671 318 ntBASIC5.56□□□□□ -1.52
Limd1Q9QXD8 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC5.56□□□□□ -1.52
Limd1Q9QXD8 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC5.56□□□□□ -1.52
Limd1Q9QXD8 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC5.56□□□□□ -1.52
Limd1Q9QXD8 Gm25834-201ENSMUST00000158916 101 ntBASIC5.56□□□□□ -1.52
Limd1Q9QXD8 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC5.56□□□□□ -1.52
Limd1Q9QXD8 Gm5777-201ENSMUST00000177265 448 ntBASIC5.56□□□□□ -1.52
Limd1Q9QXD8 Gm23355-201ENSMUST00000177614 107 ntBASIC5.56□□□□□ -1.52
Limd1Q9QXD8 Gm23148-201ENSMUST00000180367 107 ntBASIC5.56□□□□□ -1.52
Limd1Q9QXD8 Gm9238-201ENSMUST00000196181 329 ntBASIC5.56□□□□□ -1.52
Limd1Q9QXD8 Gm42830-201ENSMUST00000196642 313 ntBASIC5.56□□□□□ -1.52
Limd1Q9QXD8 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC5.56□□□□□ -1.52
Limd1Q9QXD8 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC5.56□□□□□ -1.52
Limd1Q9QXD8 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC5.56□□□□□ -1.52
Limd1Q9QXD8 Gm8719-201ENSMUST00000203602 534 ntBASIC5.56□□□□□ -1.52
Limd1Q9QXD8 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Limd1Q9QXD8 Gm35857-201ENSMUST00000212739 178 ntBASIC5.56□□□□□ -1.52
Limd1Q9QXD8 AC133910.1-201ENSMUST00000228128 624 ntBASIC5.56□□□□□ -1.52
Limd1Q9QXD8 Gm25147-201ENSMUST00000083030 105 ntBASIC5.56□□□□□ -1.52
Limd1Q9QXD8 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC5.56□□□□□ -1.52
Limd1Q9QXD8 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Limd1Q9QXD8 Gm44438-201ENSMUST00000204388 3236 ntBASIC5.56□□□□□ -1.52
Limd1Q9QXD8 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Limd1Q9QXD8 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Limd1Q9QXD8 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Limd1Q9QXD8 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Limd1Q9QXD8 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Limd1Q9QXD8 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Limd1Q9QXD8 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Limd1Q9QXD8 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Limd1Q9QXD8 Gm38125-201ENSMUST00000194136 3438 ntBASIC5.55□□□□□ -1.52
Limd1Q9QXD8 Gm24671-201ENSMUST00000104159 158 ntBASIC5.55□□□□□ -1.52
Limd1Q9QXD8 Gm24469-201ENSMUST00000104487 131 ntBASIC5.55□□□□□ -1.52
Limd1Q9QXD8 Gm22899-201ENSMUST00000104540 131 ntBASIC5.55□□□□□ -1.52
Limd1Q9QXD8 Gm15846-201ENSMUST00000116022 320 ntBASIC5.55□□□□□ -1.52
Limd1Q9QXD8 Gm12423-201ENSMUST00000118334 135 ntBASIC5.55□□□□□ -1.52
Limd1Q9QXD8 Gm11572-201ENSMUST00000119164 120 ntBASIC5.55□□□□□ -1.52
Limd1Q9QXD8 Gm12704-201ENSMUST00000119789 464 ntBASIC5.55□□□□□ -1.52
Limd1Q9QXD8 Gm25783-201ENSMUST00000122525 190 ntBASIC5.55□□□□□ -1.52
Limd1Q9QXD8 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC5.55□□□□□ -1.52
Limd1Q9QXD8 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Limd1Q9QXD8 Gm23277-201ENSMUST00000157914 136 ntBASIC5.55□□□□□ -1.52
Limd1Q9QXD8 Gm16326-201ENSMUST00000162843 414 ntBASIC5.55□□□□□ -1.52
Limd1Q9QXD8 Gm17020-201ENSMUST00000172274 274 ntBASIC5.55□□□□□ -1.52
Limd1Q9QXD8 Gm22118-201ENSMUST00000175593 171 ntBASIC5.55□□□□□ -1.52
Limd1Q9QXD8 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Limd1Q9QXD8 Gm43529-201ENSMUST00000199178 412 ntBASIC5.55□□□□□ -1.52
Limd1Q9QXD8 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC5.55□□□□□ -1.52
Limd1Q9QXD8 Gm32308-201ENSMUST00000203053 280 ntBASIC5.55□□□□□ -1.52
Limd1Q9QXD8 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC5.55□□□□□ -1.52
Limd1Q9QXD8 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC5.55□□□□□ -1.52
Limd1Q9QXD8 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC5.55□□□□□ -1.52
Limd1Q9QXD8 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms