Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Gm7327-201ENSMUST00000120925 652 ntBASIC1.98□□□□□ -2.09
Trem3Q9JKE1 Gm14564-201ENSMUST00000122159 294 ntBASIC1.98□□□□□ -2.09
Trem3Q9JKE1 Gm1989-201ENSMUST00000126244 636 ntBASIC1.98□□□□□ -2.09
Trem3Q9JKE1 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC1.98□□□□□ -2.09
Trem3Q9JKE1 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC1.98□□□□□ -2.09
Trem3Q9JKE1 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Trem3Q9JKE1 Gm22277-201ENSMUST00000157204 277 ntBASIC1.98□□□□□ -2.09
Trem3Q9JKE1 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Trem3Q9JKE1 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC1.98□□□□□ -2.09
Trem3Q9JKE1 Gm23415-201ENSMUST00000175519 83 ntBASIC1.98□□□□□ -2.09
Trem3Q9JKE1 Gm20673-201ENSMUST00000177167 430 ntBASIC1.98□□□□□ -2.09
Trem3Q9JKE1 Gm24220-201ENSMUST00000177753 79 ntBASIC1.98□□□□□ -2.09
Trem3Q9JKE1 Gm25988-201ENSMUST00000177759 79 ntBASIC1.98□□□□□ -2.09
Trem3Q9JKE1 Gm23471-201ENSMUST00000177886 79 ntBASIC1.98□□□□□ -2.09
Trem3Q9JKE1 Gm26488-201ENSMUST00000178225 79 ntBASIC1.98□□□□□ -2.09
Trem3Q9JKE1 Gm23449-201ENSMUST00000179208 79 ntBASIC1.98□□□□□ -2.09
Trem3Q9JKE1 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Trem3Q9JKE1 Gm25221-201ENSMUST00000180051 79 ntBASIC1.98□□□□□ -2.09
Trem3Q9JKE1 Gm19200-201ENSMUST00000182579 1001 ntBASIC1.98□□□□□ -2.09
Trem3Q9JKE1 Olfr1055-202ENSMUST00000188023 939 ntBASIC1.98□□□□□ -2.09
Trem3Q9JKE1 Gm28113-201ENSMUST00000188280 229 ntBASIC1.98□□□□□ -2.09
Trem3Q9JKE1 Gm38076-201ENSMUST00000193889 450 ntBASIC1.98□□□□□ -2.09
Trem3Q9JKE1 Gm43722-201ENSMUST00000196054 124 ntBASIC1.98□□□□□ -2.09
Trem3Q9JKE1 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Trem3Q9JKE1 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Trem3Q9JKE1 Gm43217-201ENSMUST00000199513 367 ntBASIC1.98□□□□□ -2.09
Trem3Q9JKE1 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC1.98□□□□□ -2.09
Trem3Q9JKE1 AC155923.1-201ENSMUST00000215676 356 ntBASIC1.98□□□□□ -2.09
Trem3Q9JKE1 Gm2436-201ENSMUST00000219562 774 ntBASIC1.98□□□□□ -2.09
Trem3Q9JKE1 AC241593.1-201ENSMUST00000224768 397 ntBASIC1.98□□□□□ -2.09
Trem3Q9JKE1 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
Trem3Q9JKE1 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Trem3Q9JKE1 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Trem3Q9JKE1 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
Trem3Q9JKE1 Gm14910-201ENSMUST00000121037 1805 ntBASIC1.98□□□□□ -2.09
Trem3Q9JKE1 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Trem3Q9JKE1 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Trem3Q9JKE1 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Trem3Q9JKE1 Gm13136-201ENSMUST00000121031 2950 ntBASIC1.97□□□□□ -2.09
Trem3Q9JKE1 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Trem3Q9JKE1 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC1.97□□□□□ -2.09
Trem3Q9JKE1 Gm14973-201ENSMUST00000117248 255 ntBASIC1.97□□□□□ -2.09
Trem3Q9JKE1 Gm8880-201ENSMUST00000121800 454 ntBASIC1.97□□□□□ -2.09
Trem3Q9JKE1 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC1.97□□□□□ -2.09
Trem3Q9JKE1 Gm24212-201ENSMUST00000158258 132 ntBASIC1.97□□□□□ -2.09
Trem3Q9JKE1 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Trem3Q9JKE1 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC1.97□□□□□ -2.09
Trem3Q9JKE1 Gm3852-201ENSMUST00000182781 264 ntBASIC1.97□□□□□ -2.09
Trem3Q9JKE1 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC1.97□□□□□ -2.09
Trem3Q9JKE1 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC1.97□□□□□ -2.09
Trem3Q9JKE1 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC1.97□□□□□ -2.09
Trem3Q9JKE1 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Trem3Q9JKE1 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC1.97□□□□□ -2.09
Trem3Q9JKE1 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC1.97□□□□□ -2.09
Trem3Q9JKE1 AC140785.1-201ENSMUST00000217782 383 ntBASIC1.97□□□□□ -2.09
Trem3Q9JKE1 Gm30534-201ENSMUST00000217928 207 ntBASIC1.97□□□□□ -2.09
Trem3Q9JKE1 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC1.97□□□□□ -2.09
Trem3Q9JKE1 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC1.97□□□□□ -2.09
Trem3Q9JKE1 AC124524.1-201ENSMUST00000225833 181 ntBASIC1.97□□□□□ -2.09
Trem3Q9JKE1 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Trem3Q9JKE1 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Trem3Q9JKE1 Gm23975-201ENSMUST00000082685 106 ntBASIC1.97□□□□□ -2.09
Trem3Q9JKE1 n-R5s86-201ENSMUST00000083215 119 ntBASIC1.97□□□□□ -2.09
Trem3Q9JKE1 Gm23249-201ENSMUST00000083369 161 ntBASIC1.97□□□□□ -2.09
Trem3Q9JKE1 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
Trem3Q9JKE1 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Trem3Q9JKE1 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
Trem3Q9JKE1 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC1.97□□□□□ -2.09
Trem3Q9JKE1 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Trem3Q9JKE1 Gm4855-201ENSMUST00000192270 1967 ntBASIC1.96□□□□□ -2.1
Trem3Q9JKE1 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
Trem3Q9JKE1 AC121598.3-201ENSMUST00000227179 1643 ntBASIC1.96□□□□□ -2.1
Trem3Q9JKE1 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Trem3Q9JKE1 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
Trem3Q9JKE1 Gm14940-201ENSMUST00000119309 495 ntBASIC1.96□□□□□ -2.1
Trem3Q9JKE1 Gm13541-201ENSMUST00000119519 283 ntBASIC1.96□□□□□ -2.1
Trem3Q9JKE1 Gm13080-201ENSMUST00000120556 420 ntBASIC1.96□□□□□ -2.1
Trem3Q9JKE1 Gm12001-201ENSMUST00000121727 913 ntBASIC1.96□□□□□ -2.1
Trem3Q9JKE1 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC1.96□□□□□ -2.1
Trem3Q9JKE1 Gm8292-201ENSMUST00000162574 396 ntBASIC1.96□□□□□ -2.1
Trem3Q9JKE1 Gm17186-201ENSMUST00000171742 456 ntBASIC1.96□□□□□ -2.1
Trem3Q9JKE1 Gm24813-201ENSMUST00000175310 84 ntBASIC1.96□□□□□ -2.1
Trem3Q9JKE1 Mir1264-201ENSMUST00000175381 86 ntBASIC1.96□□□□□ -2.1
Trem3Q9JKE1 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Trem3Q9JKE1 Gm25412-201ENSMUST00000180258 107 ntBASIC1.96□□□□□ -2.1
Trem3Q9JKE1 Gm23190-201ENSMUST00000180307 64 ntBASIC1.96□□□□□ -2.1
Trem3Q9JKE1 Gm8816-201ENSMUST00000182280 1163 ntBASIC1.96□□□□□ -2.1
Trem3Q9JKE1 Gm27220-201ENSMUST00000183453 262 ntBASIC1.96□□□□□ -2.1
Trem3Q9JKE1 Gm28650-201ENSMUST00000188413 411 ntBASIC1.96□□□□□ -2.1
Trem3Q9JKE1 Gm28788-201ENSMUST00000189717 375 ntBASIC1.96□□□□□ -2.1
Trem3Q9JKE1 Gm29330-201ENSMUST00000190032 699 ntBASIC1.96□□□□□ -2.1
Trem3Q9JKE1 Gm29558-201ENSMUST00000190134 375 ntBASIC1.96□□□□□ -2.1
Trem3Q9JKE1 Gm28098-201ENSMUST00000191361 699 ntBASIC1.96□□□□□ -2.1
Trem3Q9JKE1 Gm29740-201ENSMUST00000193182 655 ntBASIC1.96□□□□□ -2.1
Trem3Q9JKE1 Nras-ps2-201ENSMUST00000195269 178 ntBASIC1.96□□□□□ -2.1
Trem3Q9JKE1 Gm43264-201ENSMUST00000202284 325 ntBASIC1.96□□□□□ -2.1
Trem3Q9JKE1 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC1.96□□□□□ -2.1
Trem3Q9JKE1 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Trem3Q9JKE1 AC147639.1-201ENSMUST00000224216 661 ntBASIC1.96□□□□□ -2.1
Trem3Q9JKE1 AC113031.2-201ENSMUST00000226132 579 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms