Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm9498-201ENSMUST00000140849 291 ntBASIC3.94□□□□□ -1.78
Trim54Q9ERP3 Gm23957-201ENSMUST00000157209 90 ntBASIC3.94□□□□□ -1.78
Trim54Q9ERP3 Gm23755-201ENSMUST00000157578 343 ntBASIC3.94□□□□□ -1.78
Trim54Q9ERP3 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC3.94□□□□□ -1.78
Trim54Q9ERP3 Gm26460-201ENSMUST00000175061 126 ntBASIC3.94□□□□□ -1.78
Trim54Q9ERP3 Gm27161-201ENSMUST00000183960 562 ntBASIC3.94□□□□□ -1.78
Trim54Q9ERP3 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC3.94□□□□□ -1.78
Trim54Q9ERP3 Gm28591-201ENSMUST00000185259 183 ntBASIC3.94□□□□□ -1.78
Trim54Q9ERP3 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Trim54Q9ERP3 Gm37097-201ENSMUST00000193676 336 ntBASIC3.94□□□□□ -1.78
Trim54Q9ERP3 Igkv11-118-201ENSMUST00000199448 346 ntBASIC3.94□□□□□ -1.78
Trim54Q9ERP3 Gm2189-201ENSMUST00000201419 429 ntBASIC3.94□□□□□ -1.78
Trim54Q9ERP3 Gm19726-201ENSMUST00000205008 240 ntBASIC3.94□□□□□ -1.78
Trim54Q9ERP3 CT025603.4-201ENSMUST00000225777 413 ntBASIC3.94□□□□□ -1.78
Trim54Q9ERP3 AC102291.2-201ENSMUST00000228083 367 ntBASIC3.94□□□□□ -1.78
Trim54Q9ERP3 Gm22739-201ENSMUST00000083437 160 ntBASIC3.94□□□□□ -1.78
Trim54Q9ERP3 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC3.94□□□□□ -1.78
Trim54Q9ERP3 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Trim54Q9ERP3 AC158805.1-201ENSMUST00000218197 2631 ntBASIC3.94□□□□□ -1.78
Trim54Q9ERP3 Gm16436-201ENSMUST00000121510 1607 ntBASIC3.94□□□□□ -1.78
Trim54Q9ERP3 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Trim54Q9ERP3 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Trim54Q9ERP3 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.94□□□□□ -1.78
Trim54Q9ERP3 Gm37792-201ENSMUST00000195761 3413 ntBASIC3.93□□□□□ -1.78
Trim54Q9ERP3 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Trim54Q9ERP3 Gm14890-201ENSMUST00000117660 676 ntBASIC3.93□□□□□ -1.78
Trim54Q9ERP3 Gm8244-201ENSMUST00000121254 264 ntBASIC3.93□□□□□ -1.78
Trim54Q9ERP3 Gm13406-201ENSMUST00000121991 256 ntBASIC3.93□□□□□ -1.78
Trim54Q9ERP3 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.93□□□□□ -1.78
Trim54Q9ERP3 Gm23231-201ENSMUST00000157299 104 ntBASIC3.93□□□□□ -1.78
Trim54Q9ERP3 Gm24059-201ENSMUST00000157493 312 ntBASIC3.93□□□□□ -1.78
Trim54Q9ERP3 Gm24976-201ENSMUST00000158972 135 ntBASIC3.93□□□□□ -1.78
Trim54Q9ERP3 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC3.93□□□□□ -1.78
Trim54Q9ERP3 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Trim54Q9ERP3 Mir3066-201ENSMUST00000175296 83 ntBASIC3.93□□□□□ -1.78
Trim54Q9ERP3 Gm22716-201ENSMUST00000177596 107 ntBASIC3.93□□□□□ -1.78
Trim54Q9ERP3 Gm22166-201ENSMUST00000178419 121 ntBASIC3.93□□□□□ -1.78
Trim54Q9ERP3 Gm23288-201ENSMUST00000179213 121 ntBASIC3.93□□□□□ -1.78
Trim54Q9ERP3 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC3.93□□□□□ -1.78
Trim54Q9ERP3 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
Trim54Q9ERP3 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC3.93□□□□□ -1.78
Trim54Q9ERP3 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC3.93□□□□□ -1.78
Trim54Q9ERP3 Gm28343-201ENSMUST00000185386 112 ntBASIC3.93□□□□□ -1.78
Trim54Q9ERP3 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC3.93□□□□□ -1.78
Trim54Q9ERP3 Gm36964-201ENSMUST00000191876 198 ntBASIC3.93□□□□□ -1.78
Trim54Q9ERP3 Gm37698-201ENSMUST00000192605 463 ntBASIC3.93□□□□□ -1.78
Trim54Q9ERP3 Gm38329-201ENSMUST00000193473 427 ntBASIC3.93□□□□□ -1.78
Trim54Q9ERP3 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.93□□□□□ -1.78
Trim54Q9ERP3 Gm7652-201ENSMUST00000200440 1151 ntBASIC3.93□□□□□ -1.78
Trim54Q9ERP3 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC3.93□□□□□ -1.78
Trim54Q9ERP3 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.93□□□□□ -1.78
Trim54Q9ERP3 AC121966.1-201ENSMUST00000221458 282 ntBASIC3.93□□□□□ -1.78
Trim54Q9ERP3 AC107453.2-201ENSMUST00000227714 655 ntBASIC3.93□□□□□ -1.78
Trim54Q9ERP3 Snord15a-201ENSMUST00000083888 148 ntBASIC3.93□□□□□ -1.78
Trim54Q9ERP3 Gm10161-201ENSMUST00000091506 204 ntBASIC3.93□□□□□ -1.78
Trim54Q9ERP3 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Trim54Q9ERP3 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Trim54Q9ERP3 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.93□□□□□ -1.78
Trim54Q9ERP3 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Trim54Q9ERP3 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Trim54Q9ERP3 Gm44679-201ENSMUST00000207202 2908 ntBASIC3.92□□□□□ -1.78
Trim54Q9ERP3 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Trim54Q9ERP3 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Trim54Q9ERP3 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Trim54Q9ERP3 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Trim54Q9ERP3 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Trim54Q9ERP3 Gm12433-201ENSMUST00000119659 255 ntBASIC3.92□□□□□ -1.78
Trim54Q9ERP3 Gm11359-201ENSMUST00000120039 567 ntBASIC3.92□□□□□ -1.78
Trim54Q9ERP3 Gm12825-201ENSMUST00000120249 563 ntBASIC3.92□□□□□ -1.78
Trim54Q9ERP3 Gm4916-201ENSMUST00000126139 642 ntBASIC3.92□□□□□ -1.78
Trim54Q9ERP3 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC3.92□□□□□ -1.78
Trim54Q9ERP3 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC3.92□□□□□ -1.78
Trim54Q9ERP3 Gm28283-201ENSMUST00000185509 178 ntBASIC3.92□□□□□ -1.78
Trim54Q9ERP3 Gm29413-201ENSMUST00000186019 880 ntBASIC3.92□□□□□ -1.78
Trim54Q9ERP3 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Trim54Q9ERP3 Gm28623-201ENSMUST00000187219 192 ntBASIC3.92□□□□□ -1.78
Trim54Q9ERP3 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.92□□□□□ -1.78
Trim54Q9ERP3 Gm29639-201ENSMUST00000188375 580 ntBASIC3.92□□□□□ -1.78
Trim54Q9ERP3 Gm29647-201ENSMUST00000188795 666 ntBASIC3.92□□□□□ -1.78
Trim54Q9ERP3 Gm28504-201ENSMUST00000190977 666 ntBASIC3.92□□□□□ -1.78
Trim54Q9ERP3 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC3.92□□□□□ -1.78
Trim54Q9ERP3 Gm38261-201ENSMUST00000192608 316 ntBASIC3.92□□□□□ -1.78
Trim54Q9ERP3 Gm35843-201ENSMUST00000193716 666 ntBASIC3.92□□□□□ -1.78
Trim54Q9ERP3 Gm43155-201ENSMUST00000202661 494 ntBASIC3.92□□□□□ -1.78
Trim54Q9ERP3 Gm44295-201ENSMUST00000203805 437 ntBASIC3.92□□□□□ -1.78
Trim54Q9ERP3 Gm45232-201ENSMUST00000207811 162 ntBASIC3.92□□□□□ -1.78
Trim54Q9ERP3 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC3.92□□□□□ -1.78
Trim54Q9ERP3 AL669916.3-201ENSMUST00000213855 94 ntBASIC3.92□□□□□ -1.78
Trim54Q9ERP3 AL669916.6-201ENSMUST00000214610 94 ntBASIC3.92□□□□□ -1.78
Trim54Q9ERP3 AL669916.4-201ENSMUST00000215976 94 ntBASIC3.92□□□□□ -1.78
Trim54Q9ERP3 AL669916.1-201ENSMUST00000217640 94 ntBASIC3.92□□□□□ -1.78
Trim54Q9ERP3 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC3.92□□□□□ -1.78
Trim54Q9ERP3 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.92□□□□□ -1.78
Trim54Q9ERP3 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3.92□□□□□ -1.78
Trim54Q9ERP3 AC118639.1-201ENSMUST00000227204 338 ntBASIC3.92□□□□□ -1.78
Trim54Q9ERP3 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Trim54Q9ERP3 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Trim54Q9ERP3 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Trim54Q9ERP3 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Trim54Q9ERP3 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms