Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC2.57□□□□□ -2
Lima1Q9ERG0 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Lima1Q9ERG0 Gm14442-201ENSMUST00000119690 1736 ntBASIC2.56□□□□□ -2
Lima1Q9ERG0 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.56□□□□□ -2
Lima1Q9ERG0 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Lima1Q9ERG0 Gm22486-201ENSMUST00000116815 137 ntBASIC2.56□□□□□ -2
Lima1Q9ERG0 Gm25539-201ENSMUST00000116886 122 ntBASIC2.56□□□□□ -2
Lima1Q9ERG0 Gm11429-201ENSMUST00000119089 144 ntBASIC2.56□□□□□ -2
Lima1Q9ERG0 Gm12313-201ENSMUST00000121347 421 ntBASIC2.56□□□□□ -2
Lima1Q9ERG0 Gm26027-201ENSMUST00000122725 268 ntBASIC2.56□□□□□ -2
Lima1Q9ERG0 Mup-ps12-201ENSMUST00000126217 549 ntBASIC2.56□□□□□ -2
Lima1Q9ERG0 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC2.56□□□□□ -2
Lima1Q9ERG0 Gm24060-201ENSMUST00000157494 95 ntBASIC2.56□□□□□ -2
Lima1Q9ERG0 Nron-204ENSMUST00000158971 370 ntBASIC2.56□□□□□ -2
Lima1Q9ERG0 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC2.56□□□□□ -2
Lima1Q9ERG0 Gm3104-201ENSMUST00000171004 473 ntBASIC2.56□□□□□ -2
Lima1Q9ERG0 Gm25412-201ENSMUST00000180258 107 ntBASIC2.56□□□□□ -2
Lima1Q9ERG0 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.56□□□□□ -2
Lima1Q9ERG0 Gm8209-201ENSMUST00000206386 553 ntBASIC2.56□□□□□ -2
Lima1Q9ERG0 Gm18855-201ENSMUST00000206689 570 ntBASIC2.56□□□□□ -2
Lima1Q9ERG0 AC167977.1-201ENSMUST00000221384 234 ntBASIC2.56□□□□□ -2
Lima1Q9ERG0 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC2.56□□□□□ -2
Lima1Q9ERG0 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.55□□□□□ -2
Lima1Q9ERG0 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
Lima1Q9ERG0 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
Lima1Q9ERG0 Gm24982-201ENSMUST00000104456 132 ntBASIC2.55□□□□□ -2
Lima1Q9ERG0 Gm13359-201ENSMUST00000119000 695 ntBASIC2.55□□□□□ -2
Lima1Q9ERG0 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Lima1Q9ERG0 Gm14910-201ENSMUST00000121037 1805 ntBASIC2.55□□□□□ -2
Lima1Q9ERG0 Gm12617-201ENSMUST00000121268 381 ntBASIC2.55□□□□□ -2
Lima1Q9ERG0 Gm12412-201ENSMUST00000121867 328 ntBASIC2.55□□□□□ -2
Lima1Q9ERG0 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC2.55□□□□□ -2
Lima1Q9ERG0 Gm23980-201ENSMUST00000157135 158 ntBASIC2.55□□□□□ -2
Lima1Q9ERG0 Gm26411-201ENSMUST00000157668 107 ntBASIC2.55□□□□□ -2
Lima1Q9ERG0 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
Lima1Q9ERG0 Ighv8-1-201ENSMUST00000194897 291 ntBASIC2.55□□□□□ -2
Lima1Q9ERG0 Gm43626-201ENSMUST00000198575 162 ntBASIC2.55□□□□□ -2
Lima1Q9ERG0 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC2.55□□□□□ -2
Lima1Q9ERG0 Gm42801-201ENSMUST00000202562 2865 ntBASIC2.55□□□□□ -2
Lima1Q9ERG0 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC2.55□□□□□ -2
Lima1Q9ERG0 Gm44399-201ENSMUST00000205043 226 ntBASIC2.55□□□□□ -2
Lima1Q9ERG0 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC2.55□□□□□ -2
Lima1Q9ERG0 AC130823.2-201ENSMUST00000226169 290 ntBASIC2.55□□□□□ -2
Lima1Q9ERG0 n-R5s50-201ENSMUST00000083168 111 ntBASIC2.55□□□□□ -2
Lima1Q9ERG0 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Lima1Q9ERG0 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC2.55□□□□□ -2
Lima1Q9ERG0 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
Lima1Q9ERG0 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Lima1Q9ERG0 Gm4855-201ENSMUST00000192270 1967 ntBASIC2.54□□□□□ -2
Lima1Q9ERG0 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Lima1Q9ERG0 Gm25526-201ENSMUST00000104332 132 ntBASIC2.54□□□□□ -2
Lima1Q9ERG0 Gm15126-201ENSMUST00000118631 833 ntBASIC2.54□□□□□ -2
Lima1Q9ERG0 Gm12891-201ENSMUST00000119358 240 ntBASIC2.54□□□□□ -2
Lima1Q9ERG0 Gm13443-201ENSMUST00000120770 555 ntBASIC2.54□□□□□ -2
Lima1Q9ERG0 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC2.54□□□□□ -2
Lima1Q9ERG0 Gm24475-201ENSMUST00000157435 143 ntBASIC2.54□□□□□ -2
Lima1Q9ERG0 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC2.54□□□□□ -2
Lima1Q9ERG0 Gm28647-201ENSMUST00000188416 197 ntBASIC2.54□□□□□ -2
Lima1Q9ERG0 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2.54□□□□□ -2
Lima1Q9ERG0 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC2.54□□□□□ -2
Lima1Q9ERG0 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.54□□□□□ -2
Lima1Q9ERG0 Gm6321-201ENSMUST00000194460 1090 ntBASIC2.54□□□□□ -2
Lima1Q9ERG0 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.54□□□□□ -2
Lima1Q9ERG0 Gm43992-201ENSMUST00000204358 197 ntBASIC2.54□□□□□ -2
Lima1Q9ERG0 CT009733.1-201ENSMUST00000225322 425 ntBASIC2.54□□□□□ -2
Lima1Q9ERG0 Gm9174-201ENSMUST00000078149 255 ntBASIC2.54□□□□□ -2
Lima1Q9ERG0 Gm7133-201ENSMUST00000187797 2039 ntBASIC2.54□□□□□ -2
Lima1Q9ERG0 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC2.54□□□□□ -2
Lima1Q9ERG0 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Lima1Q9ERG0 Gm11221-201ENSMUST00000117230 597 ntBASIC2.53□□□□□ -2
Lima1Q9ERG0 Gm14069-201ENSMUST00000120815 229 ntBASIC2.53□□□□□ -2
Lima1Q9ERG0 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC2.53□□□□□ -2
Lima1Q9ERG0 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
Lima1Q9ERG0 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC2.53□□□□□ -2
Lima1Q9ERG0 Gm25476-201ENSMUST00000175125 185 ntBASIC2.53□□□□□ -2
Lima1Q9ERG0 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC2.53□□□□□ -2
Lima1Q9ERG0 Mir7047-201ENSMUST00000184595 64 ntBASIC2.53□□□□□ -2
Lima1Q9ERG0 Gm6801-201ENSMUST00000190697 339 ntBASIC2.53□□□□□ -2
Lima1Q9ERG0 Gm18551-201ENSMUST00000195594 642 ntBASIC2.53□□□□□ -2
Lima1Q9ERG0 Gm9632-201ENSMUST00000195934 643 ntBASIC2.53□□□□□ -2
Lima1Q9ERG0 Gm42454-201ENSMUST00000196805 1181 ntBASIC2.53□□□□□ -2
Lima1Q9ERG0 Gm44332-201ENSMUST00000203712 433 ntBASIC2.53□□□□□ -2
Lima1Q9ERG0 AC113031.2-201ENSMUST00000226132 579 ntBASIC2.53□□□□□ -2
Lima1Q9ERG0 CT030704.1-201ENSMUST00000227521 699 ntBASIC2.53□□□□□ -2
Lima1Q9ERG0 Gm23249-201ENSMUST00000083369 161 ntBASIC2.53□□□□□ -2
Lima1Q9ERG0 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC2.53□□□□□ -2
Lima1Q9ERG0 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Lima1Q9ERG0 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
Lima1Q9ERG0 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.52□□□□□ -2.01
Lima1Q9ERG0 Gm5937-201ENSMUST00000119715 643 ntBASIC2.52□□□□□ -2.01
Lima1Q9ERG0 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC2.52□□□□□ -2.01
Lima1Q9ERG0 Gm22957-201ENSMUST00000122511 123 ntBASIC2.52□□□□□ -2.01
Lima1Q9ERG0 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Lima1Q9ERG0 Gm23600-201ENSMUST00000157260 71 ntBASIC2.52□□□□□ -2.01
Lima1Q9ERG0 Gm22225-201ENSMUST00000157358 278 ntBASIC2.52□□□□□ -2.01
Lima1Q9ERG0 Gm23668-201ENSMUST00000157465 111 ntBASIC2.52□□□□□ -2.01
Lima1Q9ERG0 Gm24291-201ENSMUST00000157633 162 ntBASIC2.52□□□□□ -2.01
Lima1Q9ERG0 Gm23223-201ENSMUST00000158119 127 ntBASIC2.52□□□□□ -2.01
Lima1Q9ERG0 Gm20450-201ENSMUST00000173652 147 ntBASIC2.52□□□□□ -2.01
Lima1Q9ERG0 Gm19203-201ENSMUST00000174049 939 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms