Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Cpsf1Q9EPU4 Gm44817-201ENSMUST00000205416 453 ntBASIC2.82□□□□□ -1.96
Cpsf1Q9EPU4 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC2.82□□□□□ -1.96
Cpsf1Q9EPU4 Gm45772-201ENSMUST00000212961 240 ntBASIC2.82□□□□□ -1.96
Cpsf1Q9EPU4 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.82□□□□□ -1.96
Cpsf1Q9EPU4 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.82□□□□□ -1.96
Cpsf1Q9EPU4 Gm4263-202ENSMUST00000221392 667 ntBASIC2.82□□□□□ -1.96
Cpsf1Q9EPU4 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC2.82□□□□□ -1.96
Cpsf1Q9EPU4 Snord104-201ENSMUST00000083192 70 ntBASIC2.82□□□□□ -1.96
Cpsf1Q9EPU4 Mir410-201ENSMUST00000083563 81 ntBASIC2.82□□□□□ -1.96
Cpsf1Q9EPU4 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Cpsf1Q9EPU4 Gm14402-201ENSMUST00000122217 508 ntBASIC2.81□□□□□ -1.96
Cpsf1Q9EPU4 Gm23043-201ENSMUST00000157890 109 ntBASIC2.81□□□□□ -1.96
Cpsf1Q9EPU4 Gm23179-201ENSMUST00000158693 304 ntBASIC2.81□□□□□ -1.96
Cpsf1Q9EPU4 Ear-ps7-201ENSMUST00000161287 442 ntBASIC2.81□□□□□ -1.96
Cpsf1Q9EPU4 Mir8116-201ENSMUST00000184134 97 ntBASIC2.81□□□□□ -1.96
Cpsf1Q9EPU4 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
Cpsf1Q9EPU4 Gm28975-201ENSMUST00000186412 686 ntBASIC2.81□□□□□ -1.96
Cpsf1Q9EPU4 Gm28744-201ENSMUST00000189939 340 ntBASIC2.81□□□□□ -1.96
Cpsf1Q9EPU4 Gm7039-201ENSMUST00000205138 346 ntBASIC2.81□□□□□ -1.96
Cpsf1Q9EPU4 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC2.81□□□□□ -1.96
Cpsf1Q9EPU4 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC2.81□□□□□ -1.96
Cpsf1Q9EPU4 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC2.81□□□□□ -1.96
Cpsf1Q9EPU4 CT009713.6-201ENSMUST00000223615 294 ntBASIC2.81□□□□□ -1.96
Cpsf1Q9EPU4 AC154532.2-201ENSMUST00000228947 598 ntBASIC2.81□□□□□ -1.96
Cpsf1Q9EPU4 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Cpsf1Q9EPU4 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC2.81□□□□□ -1.96
Cpsf1Q9EPU4 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Cpsf1Q9EPU4 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Cpsf1Q9EPU4 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
Cpsf1Q9EPU4 Gm44438-201ENSMUST00000204388 3236 ntBASIC2.8□□□□□ -1.96
Cpsf1Q9EPU4 Gm23010-201ENSMUST00000104151 126 ntBASIC2.8□□□□□ -1.96
Cpsf1Q9EPU4 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
Cpsf1Q9EPU4 Gm23109-201ENSMUST00000116867 126 ntBASIC2.8□□□□□ -1.96
Cpsf1Q9EPU4 Gm23234-201ENSMUST00000157304 134 ntBASIC2.8□□□□□ -1.96
Cpsf1Q9EPU4 Gm23289-201ENSMUST00000175615 108 ntBASIC2.8□□□□□ -1.96
Cpsf1Q9EPU4 Gm45240-201ENSMUST00000211437 674 ntBASIC2.8□□□□□ -1.96
Cpsf1Q9EPU4 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Cpsf1Q9EPU4 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Cpsf1Q9EPU4 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Cpsf1Q9EPU4 Gm43718-201ENSMUST00000197524 1857 ntBASIC2.79□□□□□ -1.96
Cpsf1Q9EPU4 Mir542-201ENSMUST00000102186 85 ntBASIC2.79□□□□□ -1.96
Cpsf1Q9EPU4 Gm24666-201ENSMUST00000158937 167 ntBASIC2.79□□□□□ -1.96
Cpsf1Q9EPU4 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.79□□□□□ -1.96
Cpsf1Q9EPU4 Gm44408-201ENSMUST00000200205 66 ntBASIC2.79□□□□□ -1.96
Cpsf1Q9EPU4 Gm45654-201ENSMUST00000210980 123 ntBASIC2.79□□□□□ -1.96
Cpsf1Q9EPU4 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.79□□□□□ -1.96
Cpsf1Q9EPU4 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC2.79□□□□□ -1.96
Cpsf1Q9EPU4 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
Cpsf1Q9EPU4 Gm12935-201ENSMUST00000119352 246 ntBASIC2.78□□□□□ -1.96
Cpsf1Q9EPU4 Gm14841-201ENSMUST00000121067 758 ntBASIC2.78□□□□□ -1.96
Cpsf1Q9EPU4 Gm9785-202ENSMUST00000144563 593 ntBASIC2.78□□□□□ -1.96
Cpsf1Q9EPU4 Gm22361-201ENSMUST00000158435 176 ntBASIC2.78□□□□□ -1.96
Cpsf1Q9EPU4 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
Cpsf1Q9EPU4 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC2.78□□□□□ -1.96
Cpsf1Q9EPU4 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Cpsf1Q9EPU4 Gm28466-201ENSMUST00000190678 659 ntBASIC2.78□□□□□ -1.96
Cpsf1Q9EPU4 Gm37732-201ENSMUST00000194377 316 ntBASIC2.78□□□□□ -1.96
Cpsf1Q9EPU4 Igkv4-65-201ENSMUST00000196986 358 ntBASIC2.78□□□□□ -1.96
Cpsf1Q9EPU4 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Cpsf1Q9EPU4 Gm18015-201ENSMUST00000214879 316 ntBASIC2.78□□□□□ -1.96
Cpsf1Q9EPU4 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC2.78□□□□□ -1.96
Cpsf1Q9EPU4 Gm11460-201ENSMUST00000118200 361 ntBASIC2.77□□□□□ -1.97
Cpsf1Q9EPU4 Gm5396-201ENSMUST00000121222 532 ntBASIC2.77□□□□□ -1.97
Cpsf1Q9EPU4 Gm18595-201ENSMUST00000175736 1068 ntBASIC2.77□□□□□ -1.97
Cpsf1Q9EPU4 Gm20648-201ENSMUST00000175815 328 ntBASIC2.77□□□□□ -1.97
Cpsf1Q9EPU4 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.77□□□□□ -1.97
Cpsf1Q9EPU4 Gm45296-201ENSMUST00000209625 205 ntBASIC2.77□□□□□ -1.97
Cpsf1Q9EPU4 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC2.77□□□□□ -1.97
Cpsf1Q9EPU4 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Cpsf1Q9EPU4 Gm26922-201ENSMUST00000082687 72 ntBASIC2.77□□□□□ -1.97
Cpsf1Q9EPU4 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.77□□□□□ -1.97
Cpsf1Q9EPU4 Gm25421-201ENSMUST00000104218 164 ntBASIC2.76□□□□□ -1.97
Cpsf1Q9EPU4 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Cpsf1Q9EPU4 Gm13913-201ENSMUST00000121126 260 ntBASIC2.76□□□□□ -1.97
Cpsf1Q9EPU4 Gm14253-201ENSMUST00000122112 639 ntBASIC2.76□□□□□ -1.97
Cpsf1Q9EPU4 Gm8292-201ENSMUST00000162574 396 ntBASIC2.76□□□□□ -1.97
Cpsf1Q9EPU4 Gm27155-201ENSMUST00000183716 898 ntBASIC2.76□□□□□ -1.97
Cpsf1Q9EPU4 Gm29604-201ENSMUST00000187176 163 ntBASIC2.76□□□□□ -1.97
Cpsf1Q9EPU4 Gm20776-201ENSMUST00000189940 700 ntBASIC2.76□□□□□ -1.97
Cpsf1Q9EPU4 Gm38080-201ENSMUST00000194035 268 ntBASIC2.76□□□□□ -1.97
Cpsf1Q9EPU4 Gm6012-201ENSMUST00000210821 730 ntBASIC2.76□□□□□ -1.97
Cpsf1Q9EPU4 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC2.76□□□□□ -1.97
Cpsf1Q9EPU4 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Cpsf1Q9EPU4 AC126554.4-201ENSMUST00000221055 409 ntBASIC2.76□□□□□ -1.97
Cpsf1Q9EPU4 AC137902.2-201ENSMUST00000227989 576 ntBASIC2.76□□□□□ -1.97
Cpsf1Q9EPU4 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Cpsf1Q9EPU4 Gm44897-201ENSMUST00000206187 1341 ntBASIC2.76□□□□□ -1.97
Cpsf1Q9EPU4 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Cpsf1Q9EPU4 Gm9225-201ENSMUST00000121921 836 ntBASIC2.76□□□□□ -1.97
Cpsf1Q9EPU4 Mir7679-201ENSMUST00000183379 63 ntBASIC2.76□□□□□ -1.97
Cpsf1Q9EPU4 Gm3489-201ENSMUST00000190083 528 ntBASIC2.76□□□□□ -1.97
Cpsf1Q9EPU4 Gm44181-201ENSMUST00000203106 483 ntBASIC2.76□□□□□ -1.97
Cpsf1Q9EPU4 AC138401.1-201ENSMUST00000221533 116 ntBASIC2.76□□□□□ -1.97
Cpsf1Q9EPU4 Gm25813-201ENSMUST00000082748 191 ntBASIC2.76□□□□□ -1.97
Cpsf1Q9EPU4 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
Cpsf1Q9EPU4 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Cpsf1Q9EPU4 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
Cpsf1Q9EPU4 Gm26473-201ENSMUST00000116763 127 ntBASIC2.75□□□□□ -1.97
Cpsf1Q9EPU4 Gm12697-201ENSMUST00000118008 667 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 293.8 ms