Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm29320-201ENSMUST00000185235 615 ntBASIC5□□□□□ -1.61
Upf1Q9EPU0 Gm29179-202ENSMUST00000186138 615 ntBASIC5□□□□□ -1.61
Upf1Q9EPU0 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC5□□□□□ -1.61
Upf1Q9EPU0 Gm29448-201ENSMUST00000186675 615 ntBASIC5□□□□□ -1.61
Upf1Q9EPU0 Gm29314-201ENSMUST00000186800 615 ntBASIC5□□□□□ -1.61
Upf1Q9EPU0 Gm28253-202ENSMUST00000187971 615 ntBASIC5□□□□□ -1.61
Upf1Q9EPU0 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC5□□□□□ -1.61
Upf1Q9EPU0 Gm29169-201ENSMUST00000189835 615 ntBASIC5□□□□□ -1.61
Upf1Q9EPU0 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC5□□□□□ -1.61
Upf1Q9EPU0 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC5□□□□□ -1.61
Upf1Q9EPU0 Gm45553-201ENSMUST00000209929 507 ntBASIC5□□□□□ -1.61
Upf1Q9EPU0 Gm17829-201ENSMUST00000219782 344 ntBASIC5□□□□□ -1.61
Upf1Q9EPU0 AC117588.2-201ENSMUST00000228340 311 ntBASIC5□□□□□ -1.61
Upf1Q9EPU0 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Upf1Q9EPU0 Gm37831-201ENSMUST00000191685 1787 ntBASIC5□□□□□ -1.61
Upf1Q9EPU0 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
Upf1Q9EPU0 Gm26696-201ENSMUST00000181941 2848 ntBASIC5□□□□□ -1.61
Upf1Q9EPU0 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Upf1Q9EPU0 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Upf1Q9EPU0 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Upf1Q9EPU0 AC158805.1-201ENSMUST00000218197 2631 ntBASIC4.99□□□□□ -1.61
Upf1Q9EPU0 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC4.99□□□□□ -1.61
Upf1Q9EPU0 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Upf1Q9EPU0 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Upf1Q9EPU0 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC4.99□□□□□ -1.61
Upf1Q9EPU0 Gm14622-201ENSMUST00000117117 468 ntBASIC4.99□□□□□ -1.61
Upf1Q9EPU0 Gm14868-201ENSMUST00000117840 216 ntBASIC4.99□□□□□ -1.61
Upf1Q9EPU0 Gm14559-201ENSMUST00000121745 496 ntBASIC4.99□□□□□ -1.61
Upf1Q9EPU0 Gm14972-201ENSMUST00000121780 364 ntBASIC4.99□□□□□ -1.61
Upf1Q9EPU0 Gm25621-201ENSMUST00000157223 114 ntBASIC4.99□□□□□ -1.61
Upf1Q9EPU0 Gm22849-201ENSMUST00000157713 307 ntBASIC4.99□□□□□ -1.61
Upf1Q9EPU0 Gm23964-201ENSMUST00000157966 107 ntBASIC4.99□□□□□ -1.61
Upf1Q9EPU0 Gm16125-201ENSMUST00000159003 339 ntBASIC4.99□□□□□ -1.61
Upf1Q9EPU0 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Upf1Q9EPU0 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC4.99□□□□□ -1.61
Upf1Q9EPU0 Mir5099-201ENSMUST00000175257 74 ntBASIC4.99□□□□□ -1.61
Upf1Q9EPU0 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.99□□□□□ -1.61
Upf1Q9EPU0 Mir7k-201ENSMUST00000184115 110 ntBASIC4.99□□□□□ -1.61
Upf1Q9EPU0 Gm28399-201ENSMUST00000186221 318 ntBASIC4.99□□□□□ -1.61
Upf1Q9EPU0 Gm28572-201ENSMUST00000187444 318 ntBASIC4.99□□□□□ -1.61
Upf1Q9EPU0 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC4.99□□□□□ -1.61
Upf1Q9EPU0 Gm18177-201ENSMUST00000188373 404 ntBASIC4.99□□□□□ -1.61
Upf1Q9EPU0 Gm6651-201ENSMUST00000189471 271 ntBASIC4.99□□□□□ -1.61
Upf1Q9EPU0 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Upf1Q9EPU0 Gm42428-201ENSMUST00000198677 302 ntBASIC4.99□□□□□ -1.61
Upf1Q9EPU0 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC4.99□□□□□ -1.61
Upf1Q9EPU0 Gm44076-201ENSMUST00000203072 520 ntBASIC4.99□□□□□ -1.61
Upf1Q9EPU0 Fth-ps3-201ENSMUST00000210405 358 ntBASIC4.99□□□□□ -1.61
Upf1Q9EPU0 Gm45420-201ENSMUST00000211243 425 ntBASIC4.99□□□□□ -1.61
Upf1Q9EPU0 AC153954.2-201ENSMUST00000213811 287 ntBASIC4.99□□□□□ -1.61
Upf1Q9EPU0 Gm8672-201ENSMUST00000221200 332 ntBASIC4.99□□□□□ -1.61
Upf1Q9EPU0 Gm23851-201ENSMUST00000083831 103 ntBASIC4.99□□□□□ -1.61
Upf1Q9EPU0 Mir452-201ENSMUST00000093629 85 ntBASIC4.99□□□□□ -1.61
Upf1Q9EPU0 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Upf1Q9EPU0 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC4.99□□□□□ -1.61
Upf1Q9EPU0 AC159193.2-201ENSMUST00000220865 4251 ntBASIC4.99□□□□□ -1.61
Upf1Q9EPU0 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
Upf1Q9EPU0 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Upf1Q9EPU0 Gm8473-201ENSMUST00000176697 1885 ntBASIC4.98□□□□□ -1.61
Upf1Q9EPU0 Gm7957-201ENSMUST00000207404 2602 ntBASIC4.98□□□□□ -1.61
Upf1Q9EPU0 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Upf1Q9EPU0 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
Upf1Q9EPU0 Gm44438-201ENSMUST00000204388 3236 ntBASIC4.98□□□□□ -1.61
Upf1Q9EPU0 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Upf1Q9EPU0 Gm44434-201ENSMUST00000203918 3745 ntBASIC4.98□□□□□ -1.61
Upf1Q9EPU0 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC4.98□□□□□ -1.61
Upf1Q9EPU0 Gm2066-201ENSMUST00000118046 389 ntBASIC4.98□□□□□ -1.61
Upf1Q9EPU0 Gm8121-201ENSMUST00000153583 499 ntBASIC4.98□□□□□ -1.61
Upf1Q9EPU0 Gm26490-201ENSMUST00000157879 140 ntBASIC4.98□□□□□ -1.61
Upf1Q9EPU0 Gm24876-201ENSMUST00000158780 92 ntBASIC4.98□□□□□ -1.61
Upf1Q9EPU0 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC4.98□□□□□ -1.61
Upf1Q9EPU0 Gm23660-201ENSMUST00000178362 79 ntBASIC4.98□□□□□ -1.61
Upf1Q9EPU0 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Upf1Q9EPU0 Gm24088-201ENSMUST00000179100 79 ntBASIC4.98□□□□□ -1.61
Upf1Q9EPU0 Gm25284-201ENSMUST00000180345 141 ntBASIC4.98□□□□□ -1.61
Upf1Q9EPU0 Gm26866-201ENSMUST00000180414 802 ntBASIC4.98□□□□□ -1.61
Upf1Q9EPU0 Gm26746-201ENSMUST00000181722 487 ntBASIC4.98□□□□□ -1.61
Upf1Q9EPU0 Gm28598-201ENSMUST00000186490 615 ntBASIC4.98□□□□□ -1.61
Upf1Q9EPU0 Gm29268-201ENSMUST00000188669 615 ntBASIC4.98□□□□□ -1.61
Upf1Q9EPU0 Gm28978-201ENSMUST00000191120 615 ntBASIC4.98□□□□□ -1.61
Upf1Q9EPU0 Gm37172-201ENSMUST00000191926 615 ntBASIC4.98□□□□□ -1.61
Upf1Q9EPU0 Gm37492-201ENSMUST00000191948 376 ntBASIC4.98□□□□□ -1.61
Upf1Q9EPU0 Ighv12-1-201ENSMUST00000195542 329 ntBASIC4.98□□□□□ -1.61
Upf1Q9EPU0 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
Upf1Q9EPU0 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC4.98□□□□□ -1.61
Upf1Q9EPU0 Gm6012-201ENSMUST00000210821 730 ntBASIC4.98□□□□□ -1.61
Upf1Q9EPU0 AC132465.3-201ENSMUST00000219326 195 ntBASIC4.98□□□□□ -1.61
Upf1Q9EPU0 AL672194.1-201ENSMUST00000224841 603 ntBASIC4.98□□□□□ -1.61
Upf1Q9EPU0 Gm23741-201ENSMUST00000097237 171 ntBASIC4.98□□□□□ -1.61
Upf1Q9EPU0 Gm8989-201ENSMUST00000184782 7275 ntBASIC4.98□□□□□ -1.61
Upf1Q9EPU0 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Upf1Q9EPU0 Gm37661-201ENSMUST00000191863 1550 ntBASIC4.98□□□□□ -1.61
Upf1Q9EPU0 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Upf1Q9EPU0 Gm13961-201ENSMUST00000119282 4772 ntBASIC4.98□□□□□ -1.61
Upf1Q9EPU0 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Upf1Q9EPU0 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Upf1Q9EPU0 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Upf1Q9EPU0 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Upf1Q9EPU0 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Upf1Q9EPU0 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms