Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm23666-201ENSMUST00000158053 116 ntBASIC3.6□□□□□ -1.83
Vps28Q9D1C8 Gm24553-201ENSMUST00000158653 131 ntBASIC3.6□□□□□ -1.83
Vps28Q9D1C8 Gm16101-201ENSMUST00000160695 430 ntBASIC3.6□□□□□ -1.83
Vps28Q9D1C8 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Vps28Q9D1C8 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Vps28Q9D1C8 Gm22174-201ENSMUST00000175050 125 ntBASIC3.6□□□□□ -1.83
Vps28Q9D1C8 Gm22692-201ENSMUST00000175055 125 ntBASIC3.6□□□□□ -1.83
Vps28Q9D1C8 Gm27634-201ENSMUST00000175060 126 ntBASIC3.6□□□□□ -1.83
Vps28Q9D1C8 Gm22460-201ENSMUST00000175269 124 ntBASIC3.6□□□□□ -1.83
Vps28Q9D1C8 Gm25535-201ENSMUST00000175364 125 ntBASIC3.6□□□□□ -1.83
Vps28Q9D1C8 Gm24365-201ENSMUST00000175384 125 ntBASIC3.6□□□□□ -1.83
Vps28Q9D1C8 Gm44310-201ENSMUST00000175424 126 ntBASIC3.6□□□□□ -1.83
Vps28Q9D1C8 Gm22639-201ENSMUST00000175591 125 ntBASIC3.6□□□□□ -1.83
Vps28Q9D1C8 Gm24979-201ENSMUST00000178626 126 ntBASIC3.6□□□□□ -1.83
Vps28Q9D1C8 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Vps28Q9D1C8 Gm8816-201ENSMUST00000182280 1163 ntBASIC3.6□□□□□ -1.83
Vps28Q9D1C8 Mir6382-201ENSMUST00000184055 110 ntBASIC3.6□□□□□ -1.83
Vps28Q9D1C8 Gm27743-201ENSMUST00000185136 126 ntBASIC3.6□□□□□ -1.83
Vps28Q9D1C8 Gm28148-201ENSMUST00000186924 697 ntBASIC3.6□□□□□ -1.83
Vps28Q9D1C8 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Vps28Q9D1C8 Gm29516-201ENSMUST00000190402 468 ntBASIC3.6□□□□□ -1.83
Vps28Q9D1C8 Gm43489-201ENSMUST00000196810 993 ntBASIC3.6□□□□□ -1.83
Vps28Q9D1C8 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.6□□□□□ -1.83
Vps28Q9D1C8 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Vps28Q9D1C8 Gm45080-201ENSMUST00000206648 283 ntBASIC3.6□□□□□ -1.83
Vps28Q9D1C8 Gm7751-201ENSMUST00000212868 709 ntBASIC3.6□□□□□ -1.83
Vps28Q9D1C8 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Vps28Q9D1C8 Gm46193-201ENSMUST00000219399 364 ntBASIC3.6□□□□□ -1.83
Vps28Q9D1C8 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.6□□□□□ -1.83
Vps28Q9D1C8 Gm4921-201ENSMUST00000219804 992 ntBASIC3.6□□□□□ -1.83
Vps28Q9D1C8 Gm16419-201ENSMUST00000221057 625 ntBASIC3.6□□□□□ -1.83
Vps28Q9D1C8 Gm46994-201ENSMUST00000221523 219 ntBASIC3.6□□□□□ -1.83
Vps28Q9D1C8 Gm5955-201ENSMUST00000222712 219 ntBASIC3.6□□□□□ -1.83
Vps28Q9D1C8 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC3.6□□□□□ -1.83
Vps28Q9D1C8 CT572983.1-201ENSMUST00000226895 514 ntBASIC3.6□□□□□ -1.83
Vps28Q9D1C8 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.6□□□□□ -1.83
Vps28Q9D1C8 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Vps28Q9D1C8 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Vps28Q9D1C8 Mir19a-201ENSMUST00000083482 82 ntBASIC3.6□□□□□ -1.83
Vps28Q9D1C8 Gm25630-201ENSMUST00000084000 162 ntBASIC3.6□□□□□ -1.83
Vps28Q9D1C8 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC3.6□□□□□ -1.83
Vps28Q9D1C8 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Vps28Q9D1C8 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Vps28Q9D1C8 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Vps28Q9D1C8 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Vps28Q9D1C8 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Vps28Q9D1C8 Gm38207-201ENSMUST00000193009 3505 ntBASIC3.6□□□□□ -1.83
Vps28Q9D1C8 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.6□□□□□ -1.83
Vps28Q9D1C8 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Vps28Q9D1C8 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Vps28Q9D1C8 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Vps28Q9D1C8 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.59□□□□□ -1.83
Vps28Q9D1C8 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.59□□□□□ -1.83
Vps28Q9D1C8 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Vps28Q9D1C8 Gm14442-201ENSMUST00000119690 1736 ntBASIC3.59□□□□□ -1.83
Vps28Q9D1C8 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.59□□□□□ -1.83
Vps28Q9D1C8 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.59□□□□□ -1.83
Vps28Q9D1C8 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC3.59□□□□□ -1.83
Vps28Q9D1C8 Gm14835-201ENSMUST00000119039 315 ntBASIC3.59□□□□□ -1.83
Vps28Q9D1C8 Gm15112-201ENSMUST00000120152 860 ntBASIC3.59□□□□□ -1.83
Vps28Q9D1C8 Gm14867-201ENSMUST00000120156 866 ntBASIC3.59□□□□□ -1.83
Vps28Q9D1C8 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC3.59□□□□□ -1.83
Vps28Q9D1C8 Gm15799-201ENSMUST00000120899 289 ntBASIC3.59□□□□□ -1.83
Vps28Q9D1C8 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.59□□□□□ -1.83
Vps28Q9D1C8 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC3.59□□□□□ -1.83
Vps28Q9D1C8 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Vps28Q9D1C8 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC3.59□□□□□ -1.83
Vps28Q9D1C8 Gm29550-201ENSMUST00000185543 285 ntBASIC3.59□□□□□ -1.83
Vps28Q9D1C8 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC3.59□□□□□ -1.83
Vps28Q9D1C8 Gm19066-201ENSMUST00000193232 1078 ntBASIC3.59□□□□□ -1.83
Vps28Q9D1C8 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Vps28Q9D1C8 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC3.59□□□□□ -1.83
Vps28Q9D1C8 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Vps28Q9D1C8 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC3.59□□□□□ -1.83
Vps28Q9D1C8 Igkv8-31-201ENSMUST00000200040 372 ntBASIC3.59□□□□□ -1.83
Vps28Q9D1C8 Gm19126-201ENSMUST00000207896 509 ntBASIC3.59□□□□□ -1.83
Vps28Q9D1C8 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC3.59□□□□□ -1.83
Vps28Q9D1C8 AC162931.1-201ENSMUST00000214184 267 ntBASIC3.59□□□□□ -1.83
Vps28Q9D1C8 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Vps28Q9D1C8 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Vps28Q9D1C8 AC167192.4-201ENSMUST00000224087 993 ntBASIC3.59□□□□□ -1.83
Vps28Q9D1C8 AC154603.1-201ENSMUST00000224355 313 ntBASIC3.59□□□□□ -1.83
Vps28Q9D1C8 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Vps28Q9D1C8 AC154484.1-201ENSMUST00000227311 771 ntBASIC3.59□□□□□ -1.83
Vps28Q9D1C8 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Vps28Q9D1C8 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Vps28Q9D1C8 Gm43924-201ENSMUST00000204851 1736 ntBASIC3.58□□□□□ -1.84
Vps28Q9D1C8 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.58□□□□□ -1.84
Vps28Q9D1C8 Gm25088-201ENSMUST00000101803 79 ntBASIC3.58□□□□□ -1.84
Vps28Q9D1C8 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC3.58□□□□□ -1.84
Vps28Q9D1C8 Gm14594-201ENSMUST00000118052 537 ntBASIC3.58□□□□□ -1.84
Vps28Q9D1C8 Gm14359-201ENSMUST00000118883 424 ntBASIC3.58□□□□□ -1.84
Vps28Q9D1C8 Gm14590-201ENSMUST00000118934 537 ntBASIC3.58□□□□□ -1.84
Vps28Q9D1C8 Gm14739-201ENSMUST00000120424 802 ntBASIC3.58□□□□□ -1.84
Vps28Q9D1C8 Gm14360-201ENSMUST00000120670 393 ntBASIC3.58□□□□□ -1.84
Vps28Q9D1C8 Gm15381-201ENSMUST00000121501 1156 ntBASIC3.58□□□□□ -1.84
Vps28Q9D1C8 Gm9498-201ENSMUST00000140849 291 ntBASIC3.58□□□□□ -1.84
Vps28Q9D1C8 Gm25977-201ENSMUST00000158697 85 ntBASIC3.58□□□□□ -1.84
Vps28Q9D1C8 Mir5129-201ENSMUST00000174938 78 ntBASIC3.58□□□□□ -1.84
Vps28Q9D1C8 Mir3066-201ENSMUST00000175296 83 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms