Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Ddx56Q9D0R4 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Ddx56Q9D0R4 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC4.27□□□□□ -1.73
Ddx56Q9D0R4 Gm26968-201ENSMUST00000182894 481 ntBASIC4.27□□□□□ -1.73
Ddx56Q9D0R4 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC4.27□□□□□ -1.73
Ddx56Q9D0R4 Gm28148-201ENSMUST00000186924 697 ntBASIC4.27□□□□□ -1.73
Ddx56Q9D0R4 Gm28650-201ENSMUST00000188413 411 ntBASIC4.27□□□□□ -1.73
Ddx56Q9D0R4 Gm4644-201ENSMUST00000197587 400 ntBASIC4.27□□□□□ -1.73
Ddx56Q9D0R4 Gm45434-201ENSMUST00000210550 293 ntBASIC4.27□□□□□ -1.73
Ddx56Q9D0R4 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Ddx56Q9D0R4 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Ddx56Q9D0R4 AC158523.1-201ENSMUST00000221398 328 ntBASIC4.27□□□□□ -1.73
Ddx56Q9D0R4 CT010511.1-201ENSMUST00000224570 315 ntBASIC4.27□□□□□ -1.73
Ddx56Q9D0R4 Gm9845-201ENSMUST00000056409 598 ntBASIC4.27□□□□□ -1.73
Ddx56Q9D0R4 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Ddx56Q9D0R4 Gm23614-201ENSMUST00000082598 107 ntBASIC4.27□□□□□ -1.73
Ddx56Q9D0R4 Gm23850-201ENSMUST00000083830 169 ntBASIC4.27□□□□□ -1.73
Ddx56Q9D0R4 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Ddx56Q9D0R4 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Ddx56Q9D0R4 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Ddx56Q9D0R4 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Ddx56Q9D0R4 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Ddx56Q9D0R4 Gm42659-201ENSMUST00000196955 1754 ntBASIC4.27□□□□□ -1.73
Ddx56Q9D0R4 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Ddx56Q9D0R4 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Ddx56Q9D0R4 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Ddx56Q9D0R4 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Ddx56Q9D0R4 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
Ddx56Q9D0R4 Gm381-201ENSMUST00000117443 2037 ntBASIC4.26□□□□□ -1.73
Ddx56Q9D0R4 Gm14429-201ENSMUST00000121881 2024 ntBASIC4.26□□□□□ -1.73
Ddx56Q9D0R4 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Ddx56Q9D0R4 Gm43871-201ENSMUST00000204931 1955 ntBASIC4.26□□□□□ -1.73
Ddx56Q9D0R4 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC4.26□□□□□ -1.73
Ddx56Q9D0R4 Gm22496-201ENSMUST00000104493 88 ntBASIC4.26□□□□□ -1.73
Ddx56Q9D0R4 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC4.26□□□□□ -1.73
Ddx56Q9D0R4 Gm15936-201ENSMUST00000118706 460 ntBASIC4.26□□□□□ -1.73
Ddx56Q9D0R4 Gm7916-201ENSMUST00000120325 456 ntBASIC4.26□□□□□ -1.73
Ddx56Q9D0R4 Gm15167-201ENSMUST00000121997 187 ntBASIC4.26□□□□□ -1.73
Ddx56Q9D0R4 Gm16411-201ENSMUST00000122164 1100 ntBASIC4.26□□□□□ -1.73
Ddx56Q9D0R4 Gm11506-201ENSMUST00000122414 470 ntBASIC4.26□□□□□ -1.73
Ddx56Q9D0R4 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC4.26□□□□□ -1.73
Ddx56Q9D0R4 Gm20450-201ENSMUST00000173652 147 ntBASIC4.26□□□□□ -1.73
Ddx56Q9D0R4 Gm22108-201ENSMUST00000177961 106 ntBASIC4.26□□□□□ -1.73
Ddx56Q9D0R4 Gm25175-201ENSMUST00000178712 79 ntBASIC4.26□□□□□ -1.73
Ddx56Q9D0R4 Gm24798-201ENSMUST00000179334 106 ntBASIC4.26□□□□□ -1.73
Ddx56Q9D0R4 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC4.26□□□□□ -1.73
Ddx56Q9D0R4 Gm28390-201ENSMUST00000185212 700 ntBASIC4.26□□□□□ -1.73
Ddx56Q9D0R4 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC4.26□□□□□ -1.73
Ddx56Q9D0R4 Gm28155-201ENSMUST00000191066 151 ntBASIC4.26□□□□□ -1.73
Ddx56Q9D0R4 Gm9696-202ENSMUST00000191541 830 ntBASIC4.26□□□□□ -1.73
Ddx56Q9D0R4 Gm37290-201ENSMUST00000195775 339 ntBASIC4.26□□□□□ -1.73
Ddx56Q9D0R4 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC4.26□□□□□ -1.73
Ddx56Q9D0R4 Gm44472-201ENSMUST00000204922 943 ntBASIC4.26□□□□□ -1.73
Ddx56Q9D0R4 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Ddx56Q9D0R4 Gm44754-201ENSMUST00000208155 400 ntBASIC4.26□□□□□ -1.73
Ddx56Q9D0R4 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC4.26□□□□□ -1.73
Ddx56Q9D0R4 AC098719.1-201ENSMUST00000228920 371 ntBASIC4.26□□□□□ -1.73
Ddx56Q9D0R4 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
Ddx56Q9D0R4 Ear14-201ENSMUST00000049559 468 ntBASIC4.26□□□□□ -1.73
Ddx56Q9D0R4 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ddx56Q9D0R4 Gm22061-201ENSMUST00000082557 107 ntBASIC4.26□□□□□ -1.73
Ddx56Q9D0R4 Gm22304-201ENSMUST00000082688 129 ntBASIC4.26□□□□□ -1.73
Ddx56Q9D0R4 Gm44742-201ENSMUST00000207190 1412 ntBASIC4.26□□□□□ -1.73
Ddx56Q9D0R4 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC4.26□□□□□ -1.73
Ddx56Q9D0R4 AC137842.3-201ENSMUST00000228855 2397 ntBASIC4.26□□□□□ -1.73
Ddx56Q9D0R4 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ddx56Q9D0R4 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Ddx56Q9D0R4 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ddx56Q9D0R4 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ddx56Q9D0R4 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ddx56Q9D0R4 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Ddx56Q9D0R4 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Ddx56Q9D0R4 Gm22834-201ENSMUST00000102021 79 ntBASIC4.25□□□□□ -1.73
Ddx56Q9D0R4 Gm22831-201ENSMUST00000102473 109 ntBASIC4.25□□□□□ -1.73
Ddx56Q9D0R4 Gm22778-201ENSMUST00000104090 128 ntBASIC4.25□□□□□ -1.73
Ddx56Q9D0R4 Gm24318-201ENSMUST00000104490 131 ntBASIC4.25□□□□□ -1.73
Ddx56Q9D0R4 Gm13873-201ENSMUST00000119208 427 ntBASIC4.25□□□□□ -1.73
Ddx56Q9D0R4 Gm7618-201ENSMUST00000121643 171 ntBASIC4.25□□□□□ -1.73
Ddx56Q9D0R4 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Ddx56Q9D0R4 Gm25391-201ENSMUST00000157342 134 ntBASIC4.25□□□□□ -1.73
Ddx56Q9D0R4 Gm26028-201ENSMUST00000158660 294 ntBASIC4.25□□□□□ -1.73
Ddx56Q9D0R4 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC4.25□□□□□ -1.73
Ddx56Q9D0R4 Mir5136-201ENSMUST00000175573 76 ntBASIC4.25□□□□□ -1.73
Ddx56Q9D0R4 Gm22917-201ENSMUST00000180116 110 ntBASIC4.25□□□□□ -1.73
Ddx56Q9D0R4 Gm7329-201ENSMUST00000185915 210 ntBASIC4.25□□□□□ -1.73
Ddx56Q9D0R4 Gm28399-201ENSMUST00000186221 318 ntBASIC4.25□□□□□ -1.73
Ddx56Q9D0R4 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Ddx56Q9D0R4 Gm28572-201ENSMUST00000187444 318 ntBASIC4.25□□□□□ -1.73
Ddx56Q9D0R4 Gm43115-201ENSMUST00000196244 160 ntBASIC4.25□□□□□ -1.73
Ddx56Q9D0R4 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ddx56Q9D0R4 Gm43227-201ENSMUST00000202239 677 ntBASIC4.25□□□□□ -1.73
Ddx56Q9D0R4 Gm7624-201ENSMUST00000209702 435 ntBASIC4.25□□□□□ -1.73
Ddx56Q9D0R4 Gm45317-201ENSMUST00000210385 223 ntBASIC4.25□□□□□ -1.73
Ddx56Q9D0R4 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC4.25□□□□□ -1.73
Ddx56Q9D0R4 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC4.25□□□□□ -1.73
Ddx56Q9D0R4 Gm46998-201ENSMUST00000221444 330 ntBASIC4.25□□□□□ -1.73
Ddx56Q9D0R4 Gm8231-201ENSMUST00000221617 783 ntBASIC4.25□□□□□ -1.73
Ddx56Q9D0R4 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC4.25□□□□□ -1.73
Ddx56Q9D0R4 CT485608.1-201ENSMUST00000228759 389 ntBASIC4.25□□□□□ -1.73
Ddx56Q9D0R4 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms