Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Ddx28Q9CWT6 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Ddx28Q9CWT6 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.31□□□□□ -1.88
Ddx28Q9CWT6 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Ddx28Q9CWT6 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Ddx28Q9CWT6 Gm45262-201ENSMUST00000209917 1463 ntBASIC3.31□□□□□ -1.88
Ddx28Q9CWT6 Gm42942-201ENSMUST00000196086 1328 ntBASIC3.31□□□□□ -1.88
Ddx28Q9CWT6 Mir693-201ENSMUST00000102187 89 ntBASIC3.31□□□□□ -1.88
Ddx28Q9CWT6 Gm11430-201ENSMUST00000121317 217 ntBASIC3.31□□□□□ -1.88
Ddx28Q9CWT6 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC3.31□□□□□ -1.88
Ddx28Q9CWT6 Gm24059-201ENSMUST00000157493 312 ntBASIC3.31□□□□□ -1.88
Ddx28Q9CWT6 Gm22059-201ENSMUST00000157544 104 ntBASIC3.31□□□□□ -1.88
Ddx28Q9CWT6 Gm23257-201ENSMUST00000158322 132 ntBASIC3.31□□□□□ -1.88
Ddx28Q9CWT6 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Ddx28Q9CWT6 Gm22584-201ENSMUST00000177935 92 ntBASIC3.31□□□□□ -1.88
Ddx28Q9CWT6 Gm23379-201ENSMUST00000180026 107 ntBASIC3.31□□□□□ -1.88
Ddx28Q9CWT6 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Ddx28Q9CWT6 Gm27189-201ENSMUST00000184119 190 ntBASIC3.31□□□□□ -1.88
Ddx28Q9CWT6 Mir7j-201ENSMUST00000184427 122 ntBASIC3.31□□□□□ -1.88
Ddx28Q9CWT6 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC3.31□□□□□ -1.88
Ddx28Q9CWT6 Gm5829-201ENSMUST00000191383 351 ntBASIC3.31□□□□□ -1.88
Ddx28Q9CWT6 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Ddx28Q9CWT6 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC3.31□□□□□ -1.88
Ddx28Q9CWT6 Gm19243-201ENSMUST00000198592 269 ntBASIC3.31□□□□□ -1.88
Ddx28Q9CWT6 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC3.31□□□□□ -1.88
Ddx28Q9CWT6 Gm45173-201ENSMUST00000206819 305 ntBASIC3.31□□□□□ -1.88
Ddx28Q9CWT6 Gm45023-201ENSMUST00000207951 379 ntBASIC3.31□□□□□ -1.88
Ddx28Q9CWT6 AL772265.1-201ENSMUST00000214379 305 ntBASIC3.31□□□□□ -1.88
Ddx28Q9CWT6 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.31□□□□□ -1.88
Ddx28Q9CWT6 Gm20304-201ENSMUST00000218168 444 ntBASIC3.31□□□□□ -1.88
Ddx28Q9CWT6 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC3.31□□□□□ -1.88
Ddx28Q9CWT6 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC3.31□□□□□ -1.88
Ddx28Q9CWT6 AC159621.1-201ENSMUST00000223249 163 ntBASIC3.31□□□□□ -1.88
Ddx28Q9CWT6 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Ddx28Q9CWT6 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.31□□□□□ -1.88
Ddx28Q9CWT6 Snord15a-201ENSMUST00000083888 148 ntBASIC3.31□□□□□ -1.88
Ddx28Q9CWT6 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Ddx28Q9CWT6 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Ddx28Q9CWT6 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.31□□□□□ -1.88
Ddx28Q9CWT6 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ddx28Q9CWT6 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ddx28Q9CWT6 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ddx28Q9CWT6 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ddx28Q9CWT6 AC158921.1-201ENSMUST00000227861 3468 ntBASIC3.3□□□□□ -1.88
Ddx28Q9CWT6 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ddx28Q9CWT6 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ddx28Q9CWT6 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ddx28Q9CWT6 Gm14981-201ENSMUST00000117325 943 ntBASIC3.3□□□□□ -1.88
Ddx28Q9CWT6 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC3.3□□□□□ -1.88
Ddx28Q9CWT6 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC3.3□□□□□ -1.88
Ddx28Q9CWT6 Gm23583-201ENSMUST00000158533 289 ntBASIC3.3□□□□□ -1.88
Ddx28Q9CWT6 Gm23022-201ENSMUST00000158768 180 ntBASIC3.3□□□□□ -1.88
Ddx28Q9CWT6 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC3.3□□□□□ -1.88
Ddx28Q9CWT6 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ddx28Q9CWT6 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC3.3□□□□□ -1.88
Ddx28Q9CWT6 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC3.3□□□□□ -1.88
Ddx28Q9CWT6 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Ddx28Q9CWT6 Gm24306-201ENSMUST00000180229 79 ntBASIC3.3□□□□□ -1.88
Ddx28Q9CWT6 Gm28597-201ENSMUST00000187664 666 ntBASIC3.3□□□□□ -1.88
Ddx28Q9CWT6 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Ddx28Q9CWT6 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC3.3□□□□□ -1.88
Ddx28Q9CWT6 Gm37343-201ENSMUST00000192542 111 ntBASIC3.3□□□□□ -1.88
Ddx28Q9CWT6 Gm36984-201ENSMUST00000192770 235 ntBASIC3.3□□□□□ -1.88
Ddx28Q9CWT6 Gm29740-201ENSMUST00000193182 655 ntBASIC3.3□□□□□ -1.88
Ddx28Q9CWT6 Gm37732-201ENSMUST00000194377 316 ntBASIC3.3□□□□□ -1.88
Ddx28Q9CWT6 Gm19457-201ENSMUST00000200995 448 ntBASIC3.3□□□□□ -1.88
Ddx28Q9CWT6 Gm18423-201ENSMUST00000205144 1074 ntBASIC3.3□□□□□ -1.88
Ddx28Q9CWT6 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC3.3□□□□□ -1.88
Ddx28Q9CWT6 Gm45778-201ENSMUST00000211959 153 ntBASIC3.3□□□□□ -1.88
Ddx28Q9CWT6 AC134334.1-201ENSMUST00000214277 255 ntBASIC3.3□□□□□ -1.88
Ddx28Q9CWT6 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC3.3□□□□□ -1.88
Ddx28Q9CWT6 AC125379.1-201ENSMUST00000221928 111 ntBASIC3.3□□□□□ -1.88
Ddx28Q9CWT6 LOC667541-201ENSMUST00000223408 278 ntBASIC3.3□□□□□ -1.88
Ddx28Q9CWT6 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC3.3□□□□□ -1.88
Ddx28Q9CWT6 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC3.3□□□□□ -1.88
Ddx28Q9CWT6 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Ddx28Q9CWT6 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
Ddx28Q9CWT6 Gm37387-201ENSMUST00000192201 1806 ntBASIC3.3□□□□□ -1.88
Ddx28Q9CWT6 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ddx28Q9CWT6 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ddx28Q9CWT6 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.29□□□□□ -1.88
Ddx28Q9CWT6 Gm43896-201ENSMUST00000203440 2032 ntBASIC3.29□□□□□ -1.88
Ddx28Q9CWT6 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.29□□□□□ -1.88
Ddx28Q9CWT6 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Ddx28Q9CWT6 Gm24890-201ENSMUST00000104389 102 ntBASIC3.29□□□□□ -1.88
Ddx28Q9CWT6 Mir294-201ENSMUST00000104710 84 ntBASIC3.29□□□□□ -1.88
Ddx28Q9CWT6 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Ddx28Q9CWT6 Gm12370-201ENSMUST00000117809 604 ntBASIC3.29□□□□□ -1.88
Ddx28Q9CWT6 Gm14359-201ENSMUST00000118883 424 ntBASIC3.29□□□□□ -1.88
Ddx28Q9CWT6 Gm15112-201ENSMUST00000120152 860 ntBASIC3.29□□□□□ -1.88
Ddx28Q9CWT6 Gm15263-201ENSMUST00000121556 642 ntBASIC3.29□□□□□ -1.88
Ddx28Q9CWT6 Gm14129-201ENSMUST00000122436 291 ntBASIC3.29□□□□□ -1.88
Ddx28Q9CWT6 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms