Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Gm24553-201ENSMUST00000158653 131 ntBASIC3.47□□□□□ -1.85
Ccdc43Q9CR29 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC3.47□□□□□ -1.85
Ccdc43Q9CR29 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC3.47□□□□□ -1.85
Ccdc43Q9CR29 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC3.47□□□□□ -1.85
Ccdc43Q9CR29 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC3.47□□□□□ -1.85
Ccdc43Q9CR29 AC139845.2-201ENSMUST00000227504 436 ntBASIC3.47□□□□□ -1.85
Ccdc43Q9CR29 AC134335.1-201ENSMUST00000227626 329 ntBASIC3.47□□□□□ -1.85
Ccdc43Q9CR29 n-R5s79-201ENSMUST00000083071 120 ntBASIC3.47□□□□□ -1.85
Ccdc43Q9CR29 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
Ccdc43Q9CR29 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.47□□□□□ -1.85
Ccdc43Q9CR29 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
Ccdc43Q9CR29 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Ccdc43Q9CR29 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Ccdc43Q9CR29 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.47□□□□□ -1.85
Ccdc43Q9CR29 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Ccdc43Q9CR29 Gm20345-201ENSMUST00000175839 2414 ntBASIC3.46□□□□□ -1.85
Ccdc43Q9CR29 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
Ccdc43Q9CR29 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
Ccdc43Q9CR29 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Ccdc43Q9CR29 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Ccdc43Q9CR29 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Ccdc43Q9CR29 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Ccdc43Q9CR29 Gm13541-201ENSMUST00000119519 283 ntBASIC3.46□□□□□ -1.86
Ccdc43Q9CR29 Gm14506-201ENSMUST00000121165 536 ntBASIC3.46□□□□□ -1.86
Ccdc43Q9CR29 Gm11430-201ENSMUST00000121317 217 ntBASIC3.46□□□□□ -1.86
Ccdc43Q9CR29 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC3.46□□□□□ -1.86
Ccdc43Q9CR29 Gm15733-201ENSMUST00000132957 242 ntBASIC3.46□□□□□ -1.86
Ccdc43Q9CR29 Gm23667-201ENSMUST00000157466 120 ntBASIC3.46□□□□□ -1.86
Ccdc43Q9CR29 Gm24552-201ENSMUST00000158646 103 ntBASIC3.46□□□□□ -1.86
Ccdc43Q9CR29 Gm15946-201ENSMUST00000160654 423 ntBASIC3.46□□□□□ -1.86
Ccdc43Q9CR29 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Ccdc43Q9CR29 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Ccdc43Q9CR29 Gm28591-201ENSMUST00000185259 183 ntBASIC3.46□□□□□ -1.86
Ccdc43Q9CR29 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC3.46□□□□□ -1.86
Ccdc43Q9CR29 Gm18982-201ENSMUST00000198118 529 ntBASIC3.46□□□□□ -1.86
Ccdc43Q9CR29 Gm44332-201ENSMUST00000203712 433 ntBASIC3.46□□□□□ -1.86
Ccdc43Q9CR29 Gm44061-201ENSMUST00000203962 1195 ntBASIC3.46□□□□□ -1.86
Ccdc43Q9CR29 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC3.46□□□□□ -1.86
Ccdc43Q9CR29 AC115357.1-201ENSMUST00000227575 466 ntBASIC3.46□□□□□ -1.86
Ccdc43Q9CR29 AC154276.2-201ENSMUST00000227707 309 ntBASIC3.46□□□□□ -1.86
Ccdc43Q9CR29 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Ccdc43Q9CR29 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Ccdc43Q9CR29 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Ccdc43Q9CR29 Mir465-201ENSMUST00000093563 74 ntBASIC3.46□□□□□ -1.86
Ccdc43Q9CR29 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Ccdc43Q9CR29 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Ccdc43Q9CR29 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Ccdc43Q9CR29 Gm43663-201ENSMUST00000198643 1505 ntBASIC3.45□□□□□ -1.86
Ccdc43Q9CR29 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Ccdc43Q9CR29 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.45□□□□□ -1.86
Ccdc43Q9CR29 Gm12935-201ENSMUST00000119352 246 ntBASIC3.45□□□□□ -1.86
Ccdc43Q9CR29 Gm14647-201ENSMUST00000119392 680 ntBASIC3.45□□□□□ -1.86
Ccdc43Q9CR29 Gm26020-201ENSMUST00000122729 183 ntBASIC3.45□□□□□ -1.86
Ccdc43Q9CR29 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC3.45□□□□□ -1.86
Ccdc43Q9CR29 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC3.45□□□□□ -1.86
Ccdc43Q9CR29 Gm23028-201ENSMUST00000158773 265 ntBASIC3.45□□□□□ -1.86
Ccdc43Q9CR29 Gm17119-201ENSMUST00000163943 280 ntBASIC3.45□□□□□ -1.86
Ccdc43Q9CR29 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Ccdc43Q9CR29 Mir6338-201ENSMUST00000183389 109 ntBASIC3.45□□□□□ -1.86
Ccdc43Q9CR29 Mir6408-201ENSMUST00000183643 91 ntBASIC3.45□□□□□ -1.86
Ccdc43Q9CR29 Gm29602-201ENSMUST00000186887 442 ntBASIC3.45□□□□□ -1.86
Ccdc43Q9CR29 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC3.45□□□□□ -1.86
Ccdc43Q9CR29 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Ccdc43Q9CR29 Gm29192-201ENSMUST00000190942 377 ntBASIC3.45□□□□□ -1.86
Ccdc43Q9CR29 Gm37692-201ENSMUST00000192633 232 ntBASIC3.45□□□□□ -1.86
Ccdc43Q9CR29 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
Ccdc43Q9CR29 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC3.45□□□□□ -1.86
Ccdc43Q9CR29 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC3.45□□□□□ -1.86
Ccdc43Q9CR29 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC3.45□□□□□ -1.86
Ccdc43Q9CR29 Gm32381-201ENSMUST00000203192 476 ntBASIC3.45□□□□□ -1.86
Ccdc43Q9CR29 Gm44657-201ENSMUST00000208568 450 ntBASIC3.45□□□□□ -1.86
Ccdc43Q9CR29 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
Ccdc43Q9CR29 AC154358.1-201ENSMUST00000224871 218 ntBASIC3.45□□□□□ -1.86
Ccdc43Q9CR29 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
Ccdc43Q9CR29 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.45□□□□□ -1.86
Ccdc43Q9CR29 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
Ccdc43Q9CR29 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Ccdc43Q9CR29 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Ccdc43Q9CR29 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC3.44□□□□□ -1.86
Ccdc43Q9CR29 Gm9119-201ENSMUST00000118866 495 ntBASIC3.44□□□□□ -1.86
Ccdc43Q9CR29 Gm14128-201ENSMUST00000119514 1011 ntBASIC3.44□□□□□ -1.86
Ccdc43Q9CR29 Gm13210-201ENSMUST00000121483 273 ntBASIC3.44□□□□□ -1.86
Ccdc43Q9CR29 Gm15065-201ENSMUST00000121699 273 ntBASIC3.44□□□□□ -1.86
Ccdc43Q9CR29 Gm23791-201ENSMUST00000122553 293 ntBASIC3.44□□□□□ -1.86
Ccdc43Q9CR29 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC3.44□□□□□ -1.86
Ccdc43Q9CR29 Gm25557-201ENSMUST00000158084 315 ntBASIC3.44□□□□□ -1.86
Ccdc43Q9CR29 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC3.44□□□□□ -1.86
Ccdc43Q9CR29 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC3.44□□□□□ -1.86
Ccdc43Q9CR29 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC3.44□□□□□ -1.86
Ccdc43Q9CR29 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC3.44□□□□□ -1.86
Ccdc43Q9CR29 Gm28412-201ENSMUST00000187243 177 ntBASIC3.44□□□□□ -1.86
Ccdc43Q9CR29 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Ccdc43Q9CR29 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC3.44□□□□□ -1.86
Ccdc43Q9CR29 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC3.44□□□□□ -1.86
Ccdc43Q9CR29 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC3.44□□□□□ -1.86
Ccdc43Q9CR29 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Ccdc43Q9CR29 Gm45438-201ENSMUST00000210242 564 ntBASIC3.44□□□□□ -1.86
Ccdc43Q9CR29 AC159476.2-201ENSMUST00000216221 418 ntBASIC3.44□□□□□ -1.86
Ccdc43Q9CR29 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.44□□□□□ -1.86
Ccdc43Q9CR29 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms