Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm23679-201ENSMUST00000083161 119 ntBASIC4.28□□□□□ -1.72
Trim8Q99PJ2 Mir215-201ENSMUST00000083628 112 ntBASIC4.28□□□□□ -1.72
Trim8Q99PJ2 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Trim8Q99PJ2 Gm6043-201ENSMUST00000099961 492 ntBASIC4.28□□□□□ -1.72
Trim8Q99PJ2 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Trim8Q99PJ2 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Trim8Q99PJ2 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
Trim8Q99PJ2 Gm42717-201ENSMUST00000197309 3463 ntBASIC4.28□□□□□ -1.72
Trim8Q99PJ2 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Trim8Q99PJ2 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
Trim8Q99PJ2 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Trim8Q99PJ2 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.27□□□□□ -1.73
Trim8Q99PJ2 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Trim8Q99PJ2 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trim8Q99PJ2 Gm9850-201ENSMUST00000117916 227 ntBASIC4.27□□□□□ -1.73
Trim8Q99PJ2 Gm14875-201ENSMUST00000120881 319 ntBASIC4.27□□□□□ -1.73
Trim8Q99PJ2 Gm15212-201ENSMUST00000122403 466 ntBASIC4.27□□□□□ -1.73
Trim8Q99PJ2 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC4.27□□□□□ -1.73
Trim8Q99PJ2 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC4.27□□□□□ -1.73
Trim8Q99PJ2 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC4.27□□□□□ -1.73
Trim8Q99PJ2 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC4.27□□□□□ -1.73
Trim8Q99PJ2 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC4.27□□□□□ -1.73
Trim8Q99PJ2 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC4.27□□□□□ -1.73
Trim8Q99PJ2 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC4.27□□□□□ -1.73
Trim8Q99PJ2 Gm22561-201ENSMUST00000157331 84 ntBASIC4.27□□□□□ -1.73
Trim8Q99PJ2 Gm22563-201ENSMUST00000157333 269 ntBASIC4.27□□□□□ -1.73
Trim8Q99PJ2 Gm25428-201ENSMUST00000157608 114 ntBASIC4.27□□□□□ -1.73
Trim8Q99PJ2 Gm23782-201ENSMUST00000157939 120 ntBASIC4.27□□□□□ -1.73
Trim8Q99PJ2 Gm24415-201ENSMUST00000180218 107 ntBASIC4.27□□□□□ -1.73
Trim8Q99PJ2 Gm26866-201ENSMUST00000180414 802 ntBASIC4.27□□□□□ -1.73
Trim8Q99PJ2 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC4.27□□□□□ -1.73
Trim8Q99PJ2 Gm27803-201ENSMUST00000183763 119 ntBASIC4.27□□□□□ -1.73
Trim8Q99PJ2 Gm27308-201ENSMUST00000184807 233 ntBASIC4.27□□□□□ -1.73
Trim8Q99PJ2 Gm27190-201ENSMUST00000184890 542 ntBASIC4.27□□□□□ -1.73
Trim8Q99PJ2 Gm28257-201ENSMUST00000185244 463 ntBASIC4.27□□□□□ -1.73
Trim8Q99PJ2 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Trim8Q99PJ2 Gm28155-201ENSMUST00000191066 151 ntBASIC4.27□□□□□ -1.73
Trim8Q99PJ2 Gm36891-201ENSMUST00000191995 655 ntBASIC4.27□□□□□ -1.73
Trim8Q99PJ2 Gm37658-201ENSMUST00000192672 315 ntBASIC4.27□□□□□ -1.73
Trim8Q99PJ2 Ighv12-1-201ENSMUST00000195542 329 ntBASIC4.27□□□□□ -1.73
Trim8Q99PJ2 Gm17956-201ENSMUST00000199931 838 ntBASIC4.27□□□□□ -1.73
Trim8Q99PJ2 Gm43028-201ENSMUST00000202561 481 ntBASIC4.27□□□□□ -1.73
Trim8Q99PJ2 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC4.27□□□□□ -1.73
Trim8Q99PJ2 Gm44161-201ENSMUST00000203532 253 ntBASIC4.27□□□□□ -1.73
Trim8Q99PJ2 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC4.27□□□□□ -1.73
Trim8Q99PJ2 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC4.27□□□□□ -1.73
Trim8Q99PJ2 AC109180.1-201ENSMUST00000218676 398 ntBASIC4.27□□□□□ -1.73
Trim8Q99PJ2 Gm18442-201ENSMUST00000220925 639 ntBASIC4.27□□□□□ -1.73
Trim8Q99PJ2 AC121966.1-201ENSMUST00000221458 282 ntBASIC4.27□□□□□ -1.73
Trim8Q99PJ2 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Trim8Q99PJ2 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trim8Q99PJ2 Gm26449-201ENSMUST00000082452 104 ntBASIC4.27□□□□□ -1.73
Trim8Q99PJ2 Gm23510-201ENSMUST00000083083 163 ntBASIC4.27□□□□□ -1.73
Trim8Q99PJ2 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trim8Q99PJ2 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trim8Q99PJ2 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Trim8Q99PJ2 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trim8Q99PJ2 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Trim8Q99PJ2 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
Trim8Q99PJ2 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC4.27□□□□□ -1.73
Trim8Q99PJ2 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim8Q99PJ2 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Trim8Q99PJ2 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
Trim8Q99PJ2 Gm23577-201ENSMUST00000103950 110 ntBASIC4.26□□□□□ -1.73
Trim8Q99PJ2 Gm22899-201ENSMUST00000104540 131 ntBASIC4.26□□□□□ -1.73
Trim8Q99PJ2 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Trim8Q99PJ2 Gm12640-201ENSMUST00000120097 310 ntBASIC4.26□□□□□ -1.73
Trim8Q99PJ2 Gm14269-201ENSMUST00000120455 306 ntBASIC4.26□□□□□ -1.73
Trim8Q99PJ2 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim8Q99PJ2 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC4.26□□□□□ -1.73
Trim8Q99PJ2 Gm22059-201ENSMUST00000157544 104 ntBASIC4.26□□□□□ -1.73
Trim8Q99PJ2 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim8Q99PJ2 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC4.26□□□□□ -1.73
Trim8Q99PJ2 Gm38069-201ENSMUST00000195360 2144 ntBASIC4.26□□□□□ -1.73
Trim8Q99PJ2 Rnu3a-202ENSMUST00000196710 213 ntBASIC4.26□□□□□ -1.73
Trim8Q99PJ2 AC174780.1-201ENSMUST00000199415 1107 ntBASIC4.26□□□□□ -1.73
Trim8Q99PJ2 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Trim8Q99PJ2 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Trim8Q99PJ2 Gm19096-201ENSMUST00000209705 766 ntBASIC4.26□□□□□ -1.73
Trim8Q99PJ2 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Trim8Q99PJ2 Gm9068-201ENSMUST00000217393 455 ntBASIC4.26□□□□□ -1.73
Trim8Q99PJ2 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Trim8Q99PJ2 AC126439.1-201ENSMUST00000226772 2104 ntBASIC4.26□□□□□ -1.73
Trim8Q99PJ2 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Trim8Q99PJ2 Apoo-ps-201ENSMUST00000061241 586 ntBASIC4.26□□□□□ -1.73
Trim8Q99PJ2 Gm22245-201ENSMUST00000082479 103 ntBASIC4.26□□□□□ -1.73
Trim8Q99PJ2 Gm22304-201ENSMUST00000082688 129 ntBASIC4.26□□□□□ -1.73
Trim8Q99PJ2 Gm23096-201ENSMUST00000083447 107 ntBASIC4.26□□□□□ -1.73
Trim8Q99PJ2 Rnu3a-201ENSMUST00000083936 214 ntBASIC4.26□□□□□ -1.73
Trim8Q99PJ2 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.26□□□□□ -1.73
Trim8Q99PJ2 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Trim8Q99PJ2 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Trim8Q99PJ2 Gm37983-201ENSMUST00000193207 2006 ntBASIC4.26□□□□□ -1.73
Trim8Q99PJ2 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC4.26□□□□□ -1.73
Trim8Q99PJ2 AC154329.1-201ENSMUST00000224408 3129 ntBASIC4.26□□□□□ -1.73
Trim8Q99PJ2 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
Trim8Q99PJ2 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC4.26□□□□□ -1.73
Trim8Q99PJ2 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC4.25□□□□□ -1.73
Trim8Q99PJ2 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC4.25□□□□□ -1.73
Trim8Q99PJ2 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC4.25□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms