Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Cstf1Q99LC2 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Cstf1Q99LC2 Gm6369-201ENSMUST00000069626 412 ntBASIC3.09□□□□□ -1.91
Cstf1Q99LC2 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Cstf1Q99LC2 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Cstf1Q99LC2 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Cstf1Q99LC2 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
Cstf1Q99LC2 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.08□□□□□ -1.92
Cstf1Q99LC2 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
Cstf1Q99LC2 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Cstf1Q99LC2 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Cstf1Q99LC2 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Cstf1Q99LC2 Gm6913-201ENSMUST00000100019 348 ntBASIC3.08□□□□□ -1.92
Cstf1Q99LC2 Gm24671-201ENSMUST00000104159 158 ntBASIC3.08□□□□□ -1.92
Cstf1Q99LC2 Mir291a-201ENSMUST00000104815 82 ntBASIC3.08□□□□□ -1.92
Cstf1Q99LC2 Gm15854-201ENSMUST00000118879 808 ntBASIC3.08□□□□□ -1.92
Cstf1Q99LC2 Gm11429-201ENSMUST00000119089 144 ntBASIC3.08□□□□□ -1.92
Cstf1Q99LC2 Gm14821-201ENSMUST00000121975 435 ntBASIC3.08□□□□□ -1.92
Cstf1Q99LC2 Mup-ps12-201ENSMUST00000126217 549 ntBASIC3.08□□□□□ -1.92
Cstf1Q99LC2 Gm16218-201ENSMUST00000155424 388 ntBASIC3.08□□□□□ -1.92
Cstf1Q99LC2 Gm24358-201ENSMUST00000158424 288 ntBASIC3.08□□□□□ -1.92
Cstf1Q99LC2 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC3.08□□□□□ -1.92
Cstf1Q99LC2 Gm23268-201ENSMUST00000175494 78 ntBASIC3.08□□□□□ -1.92
Cstf1Q99LC2 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC3.08□□□□□ -1.92
Cstf1Q99LC2 Gm26701-201ENSMUST00000181571 234 ntBASIC3.08□□□□□ -1.92
Cstf1Q99LC2 Mir7068-201ENSMUST00000183439 74 ntBASIC3.08□□□□□ -1.92
Cstf1Q99LC2 Gm18667-201ENSMUST00000186523 484 ntBASIC3.08□□□□□ -1.92
Cstf1Q99LC2 Gm29602-201ENSMUST00000186887 442 ntBASIC3.08□□□□□ -1.92
Cstf1Q99LC2 Gm37578-201ENSMUST00000192256 1177 ntBASIC3.08□□□□□ -1.92
Cstf1Q99LC2 Gm38281-201ENSMUST00000192301 315 ntBASIC3.08□□□□□ -1.92
Cstf1Q99LC2 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC3.08□□□□□ -1.92
Cstf1Q99LC2 Gm35931-201ENSMUST00000203931 448 ntBASIC3.08□□□□□ -1.92
Cstf1Q99LC2 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC3.08□□□□□ -1.92
Cstf1Q99LC2 Gm17911-201ENSMUST00000210806 877 ntBASIC3.08□□□□□ -1.92
Cstf1Q99LC2 Gm6842-201ENSMUST00000211361 390 ntBASIC3.08□□□□□ -1.92
Cstf1Q99LC2 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Cstf1Q99LC2 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.08□□□□□ -1.92
Cstf1Q99LC2 AC121966.1-201ENSMUST00000221458 282 ntBASIC3.08□□□□□ -1.92
Cstf1Q99LC2 AC124569.1-201ENSMUST00000225932 101 ntBASIC3.08□□□□□ -1.92
Cstf1Q99LC2 AC156574.2-201ENSMUST00000228023 282 ntBASIC3.08□□□□□ -1.92
Cstf1Q99LC2 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Cstf1Q99LC2 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
Cstf1Q99LC2 AC158805.1-201ENSMUST00000218197 2631 ntBASIC3.08□□□□□ -1.92
Cstf1Q99LC2 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.08□□□□□ -1.92
Cstf1Q99LC2 Gm42852-201ENSMUST00000202649 1379 ntBASIC3.08□□□□□ -1.92
Cstf1Q99LC2 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Cstf1Q99LC2 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Cstf1Q99LC2 Mir693-201ENSMUST00000102187 89 ntBASIC3.07□□□□□ -1.92
Cstf1Q99LC2 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC3.07□□□□□ -1.92
Cstf1Q99LC2 Gm14562-201ENSMUST00000129885 543 ntBASIC3.07□□□□□ -1.92
Cstf1Q99LC2 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC3.07□□□□□ -1.92
Cstf1Q99LC2 Gm22766-201ENSMUST00000158372 99 ntBASIC3.07□□□□□ -1.92
Cstf1Q99LC2 Gm10075-201ENSMUST00000162030 545 ntBASIC3.07□□□□□ -1.92
Cstf1Q99LC2 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Cstf1Q99LC2 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Cstf1Q99LC2 Gm28146-201ENSMUST00000185517 701 ntBASIC3.07□□□□□ -1.92
Cstf1Q99LC2 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Cstf1Q99LC2 Gm29389-201ENSMUST00000191562 352 ntBASIC3.07□□□□□ -1.92
Cstf1Q99LC2 Gm38231-201ENSMUST00000192030 347 ntBASIC3.07□□□□□ -1.92
Cstf1Q99LC2 Gm38213-201ENSMUST00000193203 173 ntBASIC3.07□□□□□ -1.92
Cstf1Q99LC2 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC3.07□□□□□ -1.92
Cstf1Q99LC2 AC155839.1-201ENSMUST00000200105 147 ntBASIC3.07□□□□□ -1.92
Cstf1Q99LC2 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC3.07□□□□□ -1.92
Cstf1Q99LC2 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Cstf1Q99LC2 AC154224.1-201ENSMUST00000224367 403 ntBASIC3.07□□□□□ -1.92
Cstf1Q99LC2 AC134335.1-201ENSMUST00000227626 329 ntBASIC3.07□□□□□ -1.92
Cstf1Q99LC2 Gm5583-201ENSMUST00000174328 1519 ntBASIC3.07□□□□□ -1.92
Cstf1Q99LC2 Gm14415-201ENSMUST00000118260 1578 ntBASIC3.07□□□□□ -1.92
Cstf1Q99LC2 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.07□□□□□ -1.92
Cstf1Q99LC2 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Cstf1Q99LC2 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Cstf1Q99LC2 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Cstf1Q99LC2 Gm12492-201ENSMUST00000117665 564 ntBASIC3.06□□□□□ -1.92
Cstf1Q99LC2 Gm23887-201ENSMUST00000122683 172 ntBASIC3.06□□□□□ -1.92
Cstf1Q99LC2 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC3.06□□□□□ -1.92
Cstf1Q99LC2 Gm22769-201ENSMUST00000158367 98 ntBASIC3.06□□□□□ -1.92
Cstf1Q99LC2 Gm22500-201ENSMUST00000158982 99 ntBASIC3.06□□□□□ -1.92
Cstf1Q99LC2 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Cstf1Q99LC2 Gm23053-201ENSMUST00000175136 96 ntBASIC3.06□□□□□ -1.92
Cstf1Q99LC2 Gm4761-201ENSMUST00000178086 582 ntBASIC3.06□□□□□ -1.92
Cstf1Q99LC2 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Cstf1Q99LC2 Gm27999-201ENSMUST00000183539 193 ntBASIC3.06□□□□□ -1.92
Cstf1Q99LC2 Mir8118-201ENSMUST00000183962 129 ntBASIC3.06□□□□□ -1.92
Cstf1Q99LC2 Gm9496-201ENSMUST00000191295 1601 ntBASIC3.06□□□□□ -1.92
Cstf1Q99LC2 Gm26379-202ENSMUST00000200225 132 ntBASIC3.06□□□□□ -1.92
Cstf1Q99LC2 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC3.06□□□□□ -1.92
Cstf1Q99LC2 Gm43498-201ENSMUST00000202002 1486 ntBASIC3.06□□□□□ -1.92
Cstf1Q99LC2 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.06□□□□□ -1.92
Cstf1Q99LC2 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC3.06□□□□□ -1.92
Cstf1Q99LC2 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.06□□□□□ -1.92
Cstf1Q99LC2 Gm44720-201ENSMUST00000206076 260 ntBASIC3.06□□□□□ -1.92
Cstf1Q99LC2 Gm45146-201ENSMUST00000207108 221 ntBASIC3.06□□□□□ -1.92
Cstf1Q99LC2 Gm45530-201ENSMUST00000211658 225 ntBASIC3.06□□□□□ -1.92
Cstf1Q99LC2 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Cstf1Q99LC2 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC3.06□□□□□ -1.92
Cstf1Q99LC2 AC153506.2-201ENSMUST00000218051 257 ntBASIC3.06□□□□□ -1.92
Cstf1Q99LC2 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC3.06□□□□□ -1.92
Cstf1Q99LC2 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC3.06□□□□□ -1.92
Cstf1Q99LC2 AC154515.2-201ENSMUST00000226093 406 ntBASIC3.06□□□□□ -1.92
Cstf1Q99LC2 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms