Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gm15399-201ENSMUST00000118055 724 ntBASIC4.04□□□□□ -1.76
Pcdha3Q91Y16 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Pcdha3Q91Y16 Gm12294-201ENSMUST00000119723 490 ntBASIC4.04□□□□□ -1.76
Pcdha3Q91Y16 Gm14656-201ENSMUST00000120342 502 ntBASIC4.04□□□□□ -1.76
Pcdha3Q91Y16 Gm11606-201ENSMUST00000120706 617 ntBASIC4.04□□□□□ -1.76
Pcdha3Q91Y16 Gm12486-201ENSMUST00000120887 541 ntBASIC4.04□□□□□ -1.76
Pcdha3Q91Y16 Gm11645-201ENSMUST00000121589 649 ntBASIC4.04□□□□□ -1.76
Pcdha3Q91Y16 Gm23098-201ENSMUST00000157552 299 ntBASIC4.04□□□□□ -1.76
Pcdha3Q91Y16 Gm23585-201ENSMUST00000157656 102 ntBASIC4.04□□□□□ -1.76
Pcdha3Q91Y16 Gm26402-201ENSMUST00000158499 113 ntBASIC4.04□□□□□ -1.76
Pcdha3Q91Y16 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC4.04□□□□□ -1.76
Pcdha3Q91Y16 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Pcdha3Q91Y16 Gm22851-201ENSMUST00000178741 94 ntBASIC4.04□□□□□ -1.76
Pcdha3Q91Y16 Gm25074-201ENSMUST00000178782 94 ntBASIC4.04□□□□□ -1.76
Pcdha3Q91Y16 Mir6382-201ENSMUST00000184055 110 ntBASIC4.04□□□□□ -1.76
Pcdha3Q91Y16 Gm27952-201ENSMUST00000184748 105 ntBASIC4.04□□□□□ -1.76
Pcdha3Q91Y16 Gm28724-201ENSMUST00000186149 625 ntBASIC4.04□□□□□ -1.76
Pcdha3Q91Y16 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC4.04□□□□□ -1.76
Pcdha3Q91Y16 Gm43472-201ENSMUST00000200175 154 ntBASIC4.04□□□□□ -1.76
Pcdha3Q91Y16 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC4.04□□□□□ -1.76
Pcdha3Q91Y16 Gm7039-201ENSMUST00000205138 346 ntBASIC4.04□□□□□ -1.76
Pcdha3Q91Y16 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC4.04□□□□□ -1.76
Pcdha3Q91Y16 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC4.04□□□□□ -1.76
Pcdha3Q91Y16 Gm19140-201ENSMUST00000209790 421 ntBASIC4.04□□□□□ -1.76
Pcdha3Q91Y16 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
Pcdha3Q91Y16 AC115750.1-201ENSMUST00000220441 567 ntBASIC4.04□□□□□ -1.76
Pcdha3Q91Y16 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Pcdha3Q91Y16 AC159621.1-201ENSMUST00000223249 163 ntBASIC4.04□□□□□ -1.76
Pcdha3Q91Y16 CT025602.1-201ENSMUST00000227281 382 ntBASIC4.04□□□□□ -1.76
Pcdha3Q91Y16 n-R5s94-201ENSMUST00000082573 119 ntBASIC4.04□□□□□ -1.76
Pcdha3Q91Y16 Gm22572-201ENSMUST00000082985 105 ntBASIC4.04□□□□□ -1.76
Pcdha3Q91Y16 Gm22229-201ENSMUST00000082987 108 ntBASIC4.04□□□□□ -1.76
Pcdha3Q91Y16 Gm25200-201ENSMUST00000083094 130 ntBASIC4.04□□□□□ -1.76
Pcdha3Q91Y16 Mir19a-201ENSMUST00000083482 82 ntBASIC4.04□□□□□ -1.76
Pcdha3Q91Y16 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Pcdha3Q91Y16 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
Pcdha3Q91Y16 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Pcdha3Q91Y16 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Pcdha3Q91Y16 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Pcdha3Q91Y16 AC125532.1-201ENSMUST00000216210 2334 ntBASIC4.04□□□□□ -1.76
Pcdha3Q91Y16 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC4.04□□□□□ -1.76
Pcdha3Q91Y16 Gm15095-201ENSMUST00000118996 1430 ntBASIC4.04□□□□□ -1.76
Pcdha3Q91Y16 Gm11284-201ENSMUST00000121910 1887 ntBASIC4.03□□□□□ -1.76
Pcdha3Q91Y16 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC4.03□□□□□ -1.76
Pcdha3Q91Y16 Gm45264-201ENSMUST00000210090 3995 ntBASIC4.03□□□□□ -1.76
Pcdha3Q91Y16 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Pcdha3Q91Y16 Gm6923-201ENSMUST00000118343 406 ntBASIC4.03□□□□□ -1.76
Pcdha3Q91Y16 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Pcdha3Q91Y16 Gm14037-201ENSMUST00000120576 313 ntBASIC4.03□□□□□ -1.76
Pcdha3Q91Y16 Defa-ps13-201ENSMUST00000120695 204 ntBASIC4.03□□□□□ -1.76
Pcdha3Q91Y16 Gm25883-201ENSMUST00000157781 271 ntBASIC4.03□□□□□ -1.76
Pcdha3Q91Y16 Gm24961-201ENSMUST00000157918 184 ntBASIC4.03□□□□□ -1.76
Pcdha3Q91Y16 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Pcdha3Q91Y16 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Pcdha3Q91Y16 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Pcdha3Q91Y16 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Pcdha3Q91Y16 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Pcdha3Q91Y16 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Pcdha3Q91Y16 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Pcdha3Q91Y16 Mir6975-201ENSMUST00000184879 61 ntBASIC4.03□□□□□ -1.76
Pcdha3Q91Y16 Gm28847-201ENSMUST00000186778 700 ntBASIC4.03□□□□□ -1.76
Pcdha3Q91Y16 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC4.03□□□□□ -1.76
Pcdha3Q91Y16 Gm29365-201ENSMUST00000189461 699 ntBASIC4.03□□□□□ -1.76
Pcdha3Q91Y16 Gm29334-201ENSMUST00000190334 357 ntBASIC4.03□□□□□ -1.76
Pcdha3Q91Y16 Gm37523-201ENSMUST00000194901 412 ntBASIC4.03□□□□□ -1.76
Pcdha3Q91Y16 Gm42526-201ENSMUST00000198956 393 ntBASIC4.03□□□□□ -1.76
Pcdha3Q91Y16 Gm45539-201ENSMUST00000210313 428 ntBASIC4.03□□□□□ -1.76
Pcdha3Q91Y16 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC4.03□□□□□ -1.76
Pcdha3Q91Y16 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Pcdha3Q91Y16 Gm31849-201ENSMUST00000220306 375 ntBASIC4.03□□□□□ -1.76
Pcdha3Q91Y16 AC124562.1-201ENSMUST00000224673 337 ntBASIC4.03□□□□□ -1.76
Pcdha3Q91Y16 AC167192.2-201ENSMUST00000224794 198 ntBASIC4.03□□□□□ -1.76
Pcdha3Q91Y16 AC133189.2-201ENSMUST00000228527 392 ntBASIC4.03□□□□□ -1.76
Pcdha3Q91Y16 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Pcdha3Q91Y16 Gm25079-201ENSMUST00000082529 203 ntBASIC4.03□□□□□ -1.76
Pcdha3Q91Y16 Gm24268-201ENSMUST00000082990 110 ntBASIC4.03□□□□□ -1.76
Pcdha3Q91Y16 Gm26121-201ENSMUST00000083364 162 ntBASIC4.03□□□□□ -1.76
Pcdha3Q91Y16 Mir30e-201ENSMUST00000083475 92 ntBASIC4.03□□□□□ -1.76
Pcdha3Q91Y16 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Pcdha3Q91Y16 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Pcdha3Q91Y16 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC4.03□□□□□ -1.76
Pcdha3Q91Y16 Gm43047-201ENSMUST00000200089 3460 ntBASIC4.03□□□□□ -1.76
Pcdha3Q91Y16 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
Pcdha3Q91Y16 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Pcdha3Q91Y16 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
Pcdha3Q91Y16 Gm45809-201ENSMUST00000211661 3894 ntBASIC4.02□□□□□ -1.77
Pcdha3Q91Y16 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC4.02□□□□□ -1.77
Pcdha3Q91Y16 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Pcdha3Q91Y16 Gm42481-201ENSMUST00000196822 2178 ntBASIC4.02□□□□□ -1.77
Pcdha3Q91Y16 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
Pcdha3Q91Y16 Gm44438-201ENSMUST00000204388 3236 ntBASIC4.02□□□□□ -1.77
Pcdha3Q91Y16 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Pcdha3Q91Y16 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
Pcdha3Q91Y16 Gm14359-201ENSMUST00000118883 424 ntBASIC4.02□□□□□ -1.77
Pcdha3Q91Y16 Gm25294-201ENSMUST00000122791 104 ntBASIC4.02□□□□□ -1.77
Pcdha3Q91Y16 Gm9498-201ENSMUST00000140849 291 ntBASIC4.02□□□□□ -1.77
Pcdha3Q91Y16 Gm6058-201ENSMUST00000154261 399 ntBASIC4.02□□□□□ -1.77
Pcdha3Q91Y16 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC4.02□□□□□ -1.77
Pcdha3Q91Y16 Gm23332-201ENSMUST00000157424 275 ntBASIC4.02□□□□□ -1.77
Pcdha3Q91Y16 Gm22597-201ENSMUST00000157602 80 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 126 ms