Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm11403-201ENSMUST00000122195 369 ntBASIC4.08□□□□□ -1.76
Clrn1Q8K445 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
Clrn1Q8K445 Gm16358-201ENSMUST00000146046 210 ntBASIC4.08□□□□□ -1.76
Clrn1Q8K445 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Clrn1Q8K445 Gm23902-201ENSMUST00000157571 134 ntBASIC4.08□□□□□ -1.76
Clrn1Q8K445 Gm22891-201ENSMUST00000158641 164 ntBASIC4.08□□□□□ -1.76
Clrn1Q8K445 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC4.08□□□□□ -1.76
Clrn1Q8K445 Mir6963-201ENSMUST00000183535 71 ntBASIC4.08□□□□□ -1.76
Clrn1Q8K445 Mir7031-201ENSMUST00000183860 65 ntBASIC4.08□□□□□ -1.76
Clrn1Q8K445 Mir6943-201ENSMUST00000185186 66 ntBASIC4.08□□□□□ -1.76
Clrn1Q8K445 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Clrn1Q8K445 Gm37983-201ENSMUST00000193207 2006 ntBASIC4.08□□□□□ -1.76
Clrn1Q8K445 Gm2077-201ENSMUST00000195017 319 ntBASIC4.08□□□□□ -1.76
Clrn1Q8K445 Gm43374-201ENSMUST00000202498 2391 ntBASIC4.08□□□□□ -1.76
Clrn1Q8K445 Gm45200-201ENSMUST00000207434 919 ntBASIC4.08□□□□□ -1.76
Clrn1Q8K445 Gm44543-201ENSMUST00000209136 396 ntBASIC4.08□□□□□ -1.76
Clrn1Q8K445 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC4.08□□□□□ -1.76
Clrn1Q8K445 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC4.08□□□□□ -1.76
Clrn1Q8K445 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Clrn1Q8K445 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Clrn1Q8K445 AC153526.4-201ENSMUST00000217713 379 ntBASIC4.08□□□□□ -1.76
Clrn1Q8K445 AC129308.2-201ENSMUST00000224588 789 ntBASIC4.08□□□□□ -1.76
Clrn1Q8K445 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Clrn1Q8K445 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Clrn1Q8K445 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Clrn1Q8K445 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Clrn1Q8K445 Gm23510-201ENSMUST00000083083 163 ntBASIC4.08□□□□□ -1.76
Clrn1Q8K445 Gm25410-201ENSMUST00000083758 137 ntBASIC4.08□□□□□ -1.76
Clrn1Q8K445 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Clrn1Q8K445 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Clrn1Q8K445 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Clrn1Q8K445 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Clrn1Q8K445 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
Clrn1Q8K445 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Clrn1Q8K445 Gm45697-201ENSMUST00000212893 2876 ntBASIC4.08□□□□□ -1.76
Clrn1Q8K445 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
Clrn1Q8K445 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC4.08□□□□□ -1.76
Clrn1Q8K445 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Clrn1Q8K445 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC4.07□□□□□ -1.76
Clrn1Q8K445 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Clrn1Q8K445 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.07□□□□□ -1.76
Clrn1Q8K445 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC4.07□□□□□ -1.76
Clrn1Q8K445 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Clrn1Q8K445 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Clrn1Q8K445 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Clrn1Q8K445 Gm14657-201ENSMUST00000117461 302 ntBASIC4.07□□□□□ -1.76
Clrn1Q8K445 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC4.07□□□□□ -1.76
Clrn1Q8K445 Gm14067-201ENSMUST00000119340 314 ntBASIC4.07□□□□□ -1.76
Clrn1Q8K445 Gm12640-201ENSMUST00000120097 310 ntBASIC4.07□□□□□ -1.76
Clrn1Q8K445 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC4.07□□□□□ -1.76
Clrn1Q8K445 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC4.07□□□□□ -1.76
Clrn1Q8K445 Gm24690-201ENSMUST00000157759 97 ntBASIC4.07□□□□□ -1.76
Clrn1Q8K445 Gm26373-201ENSMUST00000157833 103 ntBASIC4.07□□□□□ -1.76
Clrn1Q8K445 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Clrn1Q8K445 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Clrn1Q8K445 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC4.07□□□□□ -1.76
Clrn1Q8K445 Gm28257-201ENSMUST00000185244 463 ntBASIC4.07□□□□□ -1.76
Clrn1Q8K445 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC4.07□□□□□ -1.76
Clrn1Q8K445 Gm37715-201ENSMUST00000193206 235 ntBASIC4.07□□□□□ -1.76
Clrn1Q8K445 Mir691-201ENSMUST00000199719 78 ntBASIC4.07□□□□□ -1.76
Clrn1Q8K445 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC4.07□□□□□ -1.76
Clrn1Q8K445 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC4.07□□□□□ -1.76
Clrn1Q8K445 Gm5373-201ENSMUST00000212113 1050 ntBASIC4.07□□□□□ -1.76
Clrn1Q8K445 AC123618.1-201ENSMUST00000220174 360 ntBASIC4.07□□□□□ -1.76
Clrn1Q8K445 AC133598.4-202ENSMUST00000225267 469 ntBASIC4.07□□□□□ -1.76
Clrn1Q8K445 AC170600.1-201ENSMUST00000228763 277 ntBASIC4.07□□□□□ -1.76
Clrn1Q8K445 Gm7117-201ENSMUST00000071515 387 ntBASIC4.07□□□□□ -1.76
Clrn1Q8K445 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Clrn1Q8K445 Gm26446-201ENSMUST00000082455 103 ntBASIC4.07□□□□□ -1.76
Clrn1Q8K445 Gm23464-201ENSMUST00000083145 147 ntBASIC4.07□□□□□ -1.76
Clrn1Q8K445 n-R5s7-201ENSMUST00000083755 121 ntBASIC4.07□□□□□ -1.76
Clrn1Q8K445 Gm29325-201ENSMUST00000190705 2528 ntBASIC4.07□□□□□ -1.76
Clrn1Q8K445 Hm629797-201ENSMUST00000183645 2398 ntBASIC4.07□□□□□ -1.76
Clrn1Q8K445 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Clrn1Q8K445 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Clrn1Q8K445 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Clrn1Q8K445 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Clrn1Q8K445 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Clrn1Q8K445 CT030170.3-201ENSMUST00000221205 1815 ntBASIC4.07□□□□□ -1.76
Clrn1Q8K445 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC4.07□□□□□ -1.76
Clrn1Q8K445 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Clrn1Q8K445 Gm38260-201ENSMUST00000193573 3995 ntBASIC4.06□□□□□ -1.76
Clrn1Q8K445 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Clrn1Q8K445 Gm38032-201ENSMUST00000195052 1589 ntBASIC4.06□□□□□ -1.76
Clrn1Q8K445 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Clrn1Q8K445 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
Clrn1Q8K445 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Clrn1Q8K445 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Clrn1Q8K445 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
Clrn1Q8K445 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Clrn1Q8K445 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Clrn1Q8K445 Synpr-207ENSMUST00000223583 3362 ntBASIC4.06□□□□□ -1.76
Clrn1Q8K445 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Clrn1Q8K445 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC4.06□□□□□ -1.76
Clrn1Q8K445 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC4.06□□□□□ -1.76
Clrn1Q8K445 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Clrn1Q8K445 Gm23422-201ENSMUST00000102000 107 ntBASIC4.06□□□□□ -1.76
Clrn1Q8K445 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Clrn1Q8K445 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC4.06□□□□□ -1.76
Clrn1Q8K445 Gm14688-201ENSMUST00000119169 303 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms