Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC3.79□□□□□ -1.8
Nup88Q8CEC0 Gm26991-201ENSMUST00000180950 620 ntBASIC3.79□□□□□ -1.8
Nup88Q8CEC0 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC3.79□□□□□ -1.8
Nup88Q8CEC0 Gm37751-201ENSMUST00000192440 1198 ntBASIC3.79□□□□□ -1.8
Nup88Q8CEC0 Gm32340-201ENSMUST00000192883 259 ntBASIC3.79□□□□□ -1.8
Nup88Q8CEC0 Gm38332-201ENSMUST00000194189 147 ntBASIC3.79□□□□□ -1.8
Nup88Q8CEC0 Gm35212-201ENSMUST00000196672 606 ntBASIC3.79□□□□□ -1.8
Nup88Q8CEC0 AC123618.1-201ENSMUST00000220174 360 ntBASIC3.79□□□□□ -1.8
Nup88Q8CEC0 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.79□□□□□ -1.8
Nup88Q8CEC0 Gm7753-201ENSMUST00000221007 867 ntBASIC3.79□□□□□ -1.8
Nup88Q8CEC0 AC155305.1-201ENSMUST00000222207 319 ntBASIC3.79□□□□□ -1.8
Nup88Q8CEC0 AC125523.1-201ENSMUST00000228018 934 ntBASIC3.79□□□□□ -1.8
Nup88Q8CEC0 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC3.79□□□□□ -1.8
Nup88Q8CEC0 Gm25404-201ENSMUST00000082970 107 ntBASIC3.79□□□□□ -1.8
Nup88Q8CEC0 Gm23136-201ENSMUST00000083425 99 ntBASIC3.79□□□□□ -1.8
Nup88Q8CEC0 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Nup88Q8CEC0 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Nup88Q8CEC0 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Nup88Q8CEC0 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Nup88Q8CEC0 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.79□□□□□ -1.8
Nup88Q8CEC0 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.78□□□□□ -1.8
Nup88Q8CEC0 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Nup88Q8CEC0 AC158805.1-201ENSMUST00000218197 2631 ntBASIC3.78□□□□□ -1.8
Nup88Q8CEC0 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC3.78□□□□□ -1.8
Nup88Q8CEC0 Gm42801-201ENSMUST00000202562 2865 ntBASIC3.78□□□□□ -1.8
Nup88Q8CEC0 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Nup88Q8CEC0 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Nup88Q8CEC0 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Nup88Q8CEC0 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Nup88Q8CEC0 Gm15659-201ENSMUST00000118881 341 ntBASIC3.78□□□□□ -1.8
Nup88Q8CEC0 Gm11943-201ENSMUST00000119473 327 ntBASIC3.78□□□□□ -1.8
Nup88Q8CEC0 Gm2318-201ENSMUST00000119623 639 ntBASIC3.78□□□□□ -1.8
Nup88Q8CEC0 Gm2768-201ENSMUST00000121062 250 ntBASIC3.78□□□□□ -1.8
Nup88Q8CEC0 Gm12095-201ENSMUST00000121962 816 ntBASIC3.78□□□□□ -1.8
Nup88Q8CEC0 Gm24138-201ENSMUST00000157572 114 ntBASIC3.78□□□□□ -1.8
Nup88Q8CEC0 Ear-ps10-201ENSMUST00000161871 460 ntBASIC3.78□□□□□ -1.8
Nup88Q8CEC0 Ear-ps3-201ENSMUST00000168308 445 ntBASIC3.78□□□□□ -1.8
Nup88Q8CEC0 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC3.78□□□□□ -1.8
Nup88Q8CEC0 Gm18417-201ENSMUST00000176564 648 ntBASIC3.78□□□□□ -1.8
Nup88Q8CEC0 Gm7438-201ENSMUST00000177664 639 ntBASIC3.78□□□□□ -1.8
Nup88Q8CEC0 Gm7408-201ENSMUST00000178014 639 ntBASIC3.78□□□□□ -1.8
Nup88Q8CEC0 Gm7386-201ENSMUST00000178020 639 ntBASIC3.78□□□□□ -1.8
Nup88Q8CEC0 Gm3657-201ENSMUST00000178170 639 ntBASIC3.78□□□□□ -1.8
Nup88Q8CEC0 Gm7415-201ENSMUST00000178205 639 ntBASIC3.78□□□□□ -1.8
Nup88Q8CEC0 Gm7398-201ENSMUST00000178589 639 ntBASIC3.78□□□□□ -1.8
Nup88Q8CEC0 Gm7391-201ENSMUST00000178680 639 ntBASIC3.78□□□□□ -1.8
Nup88Q8CEC0 Gm26177-201ENSMUST00000178683 107 ntBASIC3.78□□□□□ -1.8
Nup88Q8CEC0 Gm7375-201ENSMUST00000179232 639 ntBASIC3.78□□□□□ -1.8
Nup88Q8CEC0 Gm3681-201ENSMUST00000179940 639 ntBASIC3.78□□□□□ -1.8
Nup88Q8CEC0 Gm18433-202ENSMUST00000195682 196 ntBASIC3.78□□□□□ -1.8
Nup88Q8CEC0 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC3.78□□□□□ -1.8
Nup88Q8CEC0 Gm45439-201ENSMUST00000211723 359 ntBASIC3.78□□□□□ -1.8
Nup88Q8CEC0 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.78□□□□□ -1.8
Nup88Q8CEC0 Gm24610-201ENSMUST00000083270 109 ntBASIC3.78□□□□□ -1.8
Nup88Q8CEC0 Gm25792-201ENSMUST00000083289 100 ntBASIC3.78□□□□□ -1.8
Nup88Q8CEC0 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Nup88Q8CEC0 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.77□□□□□ -1.81
Nup88Q8CEC0 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Nup88Q8CEC0 Gm44625-201ENSMUST00000207838 1561 ntBASIC3.77□□□□□ -1.81
Nup88Q8CEC0 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Nup88Q8CEC0 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.77□□□□□ -1.81
Nup88Q8CEC0 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Nup88Q8CEC0 Gm25308-201ENSMUST00000104171 158 ntBASIC3.77□□□□□ -1.81
Nup88Q8CEC0 Gm12102-201ENSMUST00000118251 604 ntBASIC3.77□□□□□ -1.81
Nup88Q8CEC0 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
Nup88Q8CEC0 Gm13239-201ENSMUST00000119920 637 ntBASIC3.77□□□□□ -1.81
Nup88Q8CEC0 Gm13511-201ENSMUST00000121167 363 ntBASIC3.77□□□□□ -1.81
Nup88Q8CEC0 n-R5s192-201ENSMUST00000122577 119 ntBASIC3.77□□□□□ -1.81
Nup88Q8CEC0 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC3.77□□□□□ -1.81
Nup88Q8CEC0 Gm37946-201ENSMUST00000192064 347 ntBASIC3.77□□□□□ -1.81
Nup88Q8CEC0 Gm37987-201ENSMUST00000194999 825 ntBASIC3.77□□□□□ -1.81
Nup88Q8CEC0 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Nup88Q8CEC0 Gm45071-201ENSMUST00000205353 571 ntBASIC3.77□□□□□ -1.81
Nup88Q8CEC0 Gm45658-201ENSMUST00000209197 580 ntBASIC3.77□□□□□ -1.81
Nup88Q8CEC0 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC3.77□□□□□ -1.81
Nup88Q8CEC0 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
Nup88Q8CEC0 AC102575.1-201ENSMUST00000225348 547 ntBASIC3.77□□□□□ -1.81
Nup88Q8CEC0 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Nup88Q8CEC0 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Nup88Q8CEC0 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Nup88Q8CEC0 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Nup88Q8CEC0 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
Nup88Q8CEC0 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Nup88Q8CEC0 Gm26474-201ENSMUST00000116762 122 ntBASIC3.76□□□□□ -1.81
Nup88Q8CEC0 Gm14815-201ENSMUST00000120060 488 ntBASIC3.76□□□□□ -1.81
Nup88Q8CEC0 Gm15190-201ENSMUST00000120855 276 ntBASIC3.76□□□□□ -1.81
Nup88Q8CEC0 Gm11260-201ENSMUST00000121163 942 ntBASIC3.76□□□□□ -1.81
Nup88Q8CEC0 Gm22718-201ENSMUST00000122701 315 ntBASIC3.76□□□□□ -1.81
Nup88Q8CEC0 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC3.76□□□□□ -1.81
Nup88Q8CEC0 Gm25490-201ENSMUST00000158734 130 ntBASIC3.76□□□□□ -1.81
Nup88Q8CEC0 Gm3102-201ENSMUST00000164236 489 ntBASIC3.76□□□□□ -1.81
Nup88Q8CEC0 Gm20612-201ENSMUST00000176318 236 ntBASIC3.76□□□□□ -1.81
Nup88Q8CEC0 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC3.76□□□□□ -1.81
Nup88Q8CEC0 Gm27308-201ENSMUST00000184807 233 ntBASIC3.76□□□□□ -1.81
Nup88Q8CEC0 Gm29740-201ENSMUST00000193182 655 ntBASIC3.76□□□□□ -1.81
Nup88Q8CEC0 Gm38154-201ENSMUST00000195444 340 ntBASIC3.76□□□□□ -1.81
Nup88Q8CEC0 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.76□□□□□ -1.81
Nup88Q8CEC0 Gm43415-201ENSMUST00000201934 750 ntBASIC3.76□□□□□ -1.81
Nup88Q8CEC0 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Nup88Q8CEC0 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC3.76□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms