Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm15231-201ENSMUST00000119174 447 ntBASIC2.46□□□□□ -2.02
Trub1Q8C0D0 Gm2318-201ENSMUST00000119623 639 ntBASIC2.46□□□□□ -2.02
Trub1Q8C0D0 Gm2005-201ENSMUST00000120759 542 ntBASIC2.46□□□□□ -2.02
Trub1Q8C0D0 Gm22718-201ENSMUST00000122701 315 ntBASIC2.46□□□□□ -2.02
Trub1Q8C0D0 Gm5929-201ENSMUST00000166883 487 ntBASIC2.46□□□□□ -2.02
Trub1Q8C0D0 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Trub1Q8C0D0 Gm7438-201ENSMUST00000177664 639 ntBASIC2.46□□□□□ -2.02
Trub1Q8C0D0 Gm7408-201ENSMUST00000178014 639 ntBASIC2.46□□□□□ -2.02
Trub1Q8C0D0 Gm7386-201ENSMUST00000178020 639 ntBASIC2.46□□□□□ -2.02
Trub1Q8C0D0 Gm3657-201ENSMUST00000178170 639 ntBASIC2.46□□□□□ -2.02
Trub1Q8C0D0 Gm7415-201ENSMUST00000178205 639 ntBASIC2.46□□□□□ -2.02
Trub1Q8C0D0 Gm7398-201ENSMUST00000178589 639 ntBASIC2.46□□□□□ -2.02
Trub1Q8C0D0 Gm7391-201ENSMUST00000178680 639 ntBASIC2.46□□□□□ -2.02
Trub1Q8C0D0 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Trub1Q8C0D0 Gm7375-201ENSMUST00000179232 639 ntBASIC2.46□□□□□ -2.02
Trub1Q8C0D0 Gm23860-201ENSMUST00000179446 132 ntBASIC2.46□□□□□ -2.02
Trub1Q8C0D0 Gm3681-201ENSMUST00000179940 639 ntBASIC2.46□□□□□ -2.02
Trub1Q8C0D0 Gm3933-201ENSMUST00000195391 439 ntBASIC2.46□□□□□ -2.02
Trub1Q8C0D0 Gm19253-201ENSMUST00000204279 307 ntBASIC2.46□□□□□ -2.02
Trub1Q8C0D0 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC2.46□□□□□ -2.02
Trub1Q8C0D0 Gm45742-201ENSMUST00000212400 433 ntBASIC2.46□□□□□ -2.02
Trub1Q8C0D0 AC144819.1-201ENSMUST00000227015 620 ntBASIC2.46□□□□□ -2.02
Trub1Q8C0D0 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.46□□□□□ -2.02
Trub1Q8C0D0 Gm42968-201ENSMUST00000198578 1372 ntBASIC2.46□□□□□ -2.02
Trub1Q8C0D0 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.46□□□□□ -2.02
Trub1Q8C0D0 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Trub1Q8C0D0 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Trub1Q8C0D0 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC2.45□□□□□ -2.02
Trub1Q8C0D0 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.45□□□□□ -2.02
Trub1Q8C0D0 Gm44438-201ENSMUST00000204388 3236 ntBASIC2.45□□□□□ -2.02
Trub1Q8C0D0 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Trub1Q8C0D0 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC2.45□□□□□ -2.02
Trub1Q8C0D0 Gm15106-201ENSMUST00000119691 821 ntBASIC2.45□□□□□ -2.02
Trub1Q8C0D0 Gm14008-201ENSMUST00000120483 274 ntBASIC2.45□□□□□ -2.02
Trub1Q8C0D0 Gm14821-201ENSMUST00000121975 435 ntBASIC2.45□□□□□ -2.02
Trub1Q8C0D0 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC2.45□□□□□ -2.02
Trub1Q8C0D0 Gm26000-201ENSMUST00000157991 107 ntBASIC2.45□□□□□ -2.02
Trub1Q8C0D0 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC2.45□□□□□ -2.02
Trub1Q8C0D0 Gm17065-201ENSMUST00000165245 239 ntBASIC2.45□□□□□ -2.02
Trub1Q8C0D0 Gm25476-201ENSMUST00000175125 185 ntBASIC2.45□□□□□ -2.02
Trub1Q8C0D0 Mir3076-201ENSMUST00000175415 60 ntBASIC2.45□□□□□ -2.02
Trub1Q8C0D0 Mir6993-201ENSMUST00000184912 65 ntBASIC2.45□□□□□ -2.02
Trub1Q8C0D0 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Trub1Q8C0D0 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Trub1Q8C0D0 Gm9541-201ENSMUST00000188409 502 ntBASIC2.45□□□□□ -2.02
Trub1Q8C0D0 Gm42828-201ENSMUST00000199669 469 ntBASIC2.45□□□□□ -2.02
Trub1Q8C0D0 Gm45226-201ENSMUST00000206602 288 ntBASIC2.45□□□□□ -2.02
Trub1Q8C0D0 Gm45247-201ENSMUST00000210757 309 ntBASIC2.45□□□□□ -2.02
Trub1Q8C0D0 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Trub1Q8C0D0 AC154257.2-201ENSMUST00000224166 340 ntBASIC2.45□□□□□ -2.02
Trub1Q8C0D0 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Trub1Q8C0D0 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Trub1Q8C0D0 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Trub1Q8C0D0 Gm26494-201ENSMUST00000083154 143 ntBASIC2.45□□□□□ -2.02
Trub1Q8C0D0 Gm24493-201ENSMUST00000083805 143 ntBASIC2.45□□□□□ -2.02
Trub1Q8C0D0 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.44□□□□□ -2.02
Trub1Q8C0D0 Mir344c-201ENSMUST00000103919 92 ntBASIC2.44□□□□□ -2.02
Trub1Q8C0D0 Gm23803-201ENSMUST00000104610 132 ntBASIC2.44□□□□□ -2.02
Trub1Q8C0D0 Gm11693-201ENSMUST00000119625 565 ntBASIC2.44□□□□□ -2.02
Trub1Q8C0D0 Gm13487-201ENSMUST00000122240 864 ntBASIC2.44□□□□□ -2.02
Trub1Q8C0D0 Gm14333-201ENSMUST00000130484 264 ntBASIC2.44□□□□□ -2.02
Trub1Q8C0D0 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC2.44□□□□□ -2.02
Trub1Q8C0D0 Gm22534-201ENSMUST00000158173 104 ntBASIC2.44□□□□□ -2.02
Trub1Q8C0D0 Gm25866-201ENSMUST00000158245 112 ntBASIC2.44□□□□□ -2.02
Trub1Q8C0D0 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Trub1Q8C0D0 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC2.44□□□□□ -2.02
Trub1Q8C0D0 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Trub1Q8C0D0 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Trub1Q8C0D0 Gm37353-201ENSMUST00000194497 313 ntBASIC2.44□□□□□ -2.02
Trub1Q8C0D0 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Trub1Q8C0D0 Gm44865-201ENSMUST00000207240 531 ntBASIC2.44□□□□□ -2.02
Trub1Q8C0D0 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC2.44□□□□□ -2.02
Trub1Q8C0D0 Gm45522-201ENSMUST00000210784 166 ntBASIC2.44□□□□□ -2.02
Trub1Q8C0D0 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.44□□□□□ -2.02
Trub1Q8C0D0 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
Trub1Q8C0D0 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC2.44□□□□□ -2.02
Trub1Q8C0D0 AC117202.3-201ENSMUST00000228532 310 ntBASIC2.44□□□□□ -2.02
Trub1Q8C0D0 Gm23975-201ENSMUST00000082685 106 ntBASIC2.44□□□□□ -2.02
Trub1Q8C0D0 Gm22444-201ENSMUST00000093693 108 ntBASIC2.44□□□□□ -2.02
Trub1Q8C0D0 Gm10343-201ENSMUST00000096279 348 ntBASIC2.44□□□□□ -2.02
Trub1Q8C0D0 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Trub1Q8C0D0 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Trub1Q8C0D0 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
Trub1Q8C0D0 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Trub1Q8C0D0 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC2.43□□□□□ -2.02
Trub1Q8C0D0 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Trub1Q8C0D0 Gm11367-201ENSMUST00000117802 120 ntBASIC2.43□□□□□ -2.02
Trub1Q8C0D0 Gm14627-201ENSMUST00000118931 567 ntBASIC2.43□□□□□ -2.02
Trub1Q8C0D0 Gm11356-201ENSMUST00000118974 192 ntBASIC2.43□□□□□ -2.02
Trub1Q8C0D0 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Trub1Q8C0D0 Gm7350-201ENSMUST00000120964 636 ntBASIC2.43□□□□□ -2.02
Trub1Q8C0D0 Gm14841-201ENSMUST00000121067 758 ntBASIC2.43□□□□□ -2.02
Trub1Q8C0D0 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
Trub1Q8C0D0 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Trub1Q8C0D0 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC2.43□□□□□ -2.02
Trub1Q8C0D0 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
Trub1Q8C0D0 Gm6113-201ENSMUST00000180319 639 ntBASIC2.43□□□□□ -2.02
Trub1Q8C0D0 Gm27921-201ENSMUST00000183968 108 ntBASIC2.43□□□□□ -2.02
Trub1Q8C0D0 Gm29492-201ENSMUST00000187124 457 ntBASIC2.43□□□□□ -2.02
Trub1Q8C0D0 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms