Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC3.25□□□□□ -1.89
Ccdc40Q8BI79 Gm27374-201ENSMUST00000183660 81 ntBASIC3.25□□□□□ -1.89
Ccdc40Q8BI79 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Ccdc40Q8BI79 Gm18982-201ENSMUST00000198118 529 ntBASIC3.25□□□□□ -1.89
Ccdc40Q8BI79 Gm44084-201ENSMUST00000203947 409 ntBASIC3.25□□□□□ -1.89
Ccdc40Q8BI79 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC3.25□□□□□ -1.89
Ccdc40Q8BI79 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC3.25□□□□□ -1.89
Ccdc40Q8BI79 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC3.25□□□□□ -1.89
Ccdc40Q8BI79 AC153522.1-201ENSMUST00000220047 1090 ntBASIC3.25□□□□□ -1.89
Ccdc40Q8BI79 AC154552.5-201ENSMUST00000222352 207 ntBASIC3.25□□□□□ -1.89
Ccdc40Q8BI79 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC3.25□□□□□ -1.89
Ccdc40Q8BI79 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.25□□□□□ -1.89
Ccdc40Q8BI79 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.25□□□□□ -1.89
Ccdc40Q8BI79 Gm26203-201ENSMUST00000082911 114 ntBASIC3.25□□□□□ -1.89
Ccdc40Q8BI79 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Ccdc40Q8BI79 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Ccdc40Q8BI79 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.24□□□□□ -1.89
Ccdc40Q8BI79 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Ccdc40Q8BI79 Gm25213-201ENSMUST00000102388 113 ntBASIC3.24□□□□□ -1.89
Ccdc40Q8BI79 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Ccdc40Q8BI79 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Ccdc40Q8BI79 Gm13761-201ENSMUST00000117238 807 ntBASIC3.24□□□□□ -1.89
Ccdc40Q8BI79 Gm14987-201ENSMUST00000117820 676 ntBASIC3.24□□□□□ -1.89
Ccdc40Q8BI79 Gm16171-201ENSMUST00000118004 324 ntBASIC3.24□□□□□ -1.89
Ccdc40Q8BI79 Gm2003-201ENSMUST00000118537 636 ntBASIC3.24□□□□□ -1.89
Ccdc40Q8BI79 Gm15799-201ENSMUST00000120899 289 ntBASIC3.24□□□□□ -1.89
Ccdc40Q8BI79 Gm23791-201ENSMUST00000122553 293 ntBASIC3.24□□□□□ -1.89
Ccdc40Q8BI79 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.24□□□□□ -1.89
Ccdc40Q8BI79 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.24□□□□□ -1.89
Ccdc40Q8BI79 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
Ccdc40Q8BI79 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC3.24□□□□□ -1.89
Ccdc40Q8BI79 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC3.24□□□□□ -1.89
Ccdc40Q8BI79 Gm15946-201ENSMUST00000160654 423 ntBASIC3.24□□□□□ -1.89
Ccdc40Q8BI79 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC3.24□□□□□ -1.89
Ccdc40Q8BI79 Gm8816-201ENSMUST00000182280 1163 ntBASIC3.24□□□□□ -1.89
Ccdc40Q8BI79 Gm5268-201ENSMUST00000189212 940 ntBASIC3.24□□□□□ -1.89
Ccdc40Q8BI79 Gm29192-201ENSMUST00000190942 377 ntBASIC3.24□□□□□ -1.89
Ccdc40Q8BI79 Gm19066-201ENSMUST00000193232 1078 ntBASIC3.24□□□□□ -1.89
Ccdc40Q8BI79 Gm19457-201ENSMUST00000200995 448 ntBASIC3.24□□□□□ -1.89
Ccdc40Q8BI79 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Ccdc40Q8BI79 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC3.24□□□□□ -1.89
Ccdc40Q8BI79 AC129202.3-201ENSMUST00000224413 733 ntBASIC3.24□□□□□ -1.89
Ccdc40Q8BI79 AC154515.2-201ENSMUST00000226093 406 ntBASIC3.24□□□□□ -1.89
Ccdc40Q8BI79 AC172751.1-201ENSMUST00000226887 440 ntBASIC3.24□□□□□ -1.89
Ccdc40Q8BI79 AC109172.1-201ENSMUST00000227503 187 ntBASIC3.24□□□□□ -1.89
Ccdc40Q8BI79 AC139845.2-201ENSMUST00000227504 436 ntBASIC3.24□□□□□ -1.89
Ccdc40Q8BI79 AC165284.1-201ENSMUST00000228614 458 ntBASIC3.24□□□□□ -1.89
Ccdc40Q8BI79 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Ccdc40Q8BI79 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Ccdc40Q8BI79 Gm23738-201ENSMUST00000082828 171 ntBASIC3.24□□□□□ -1.89
Ccdc40Q8BI79 Gm24533-201ENSMUST00000083138 196 ntBASIC3.24□□□□□ -1.89
Ccdc40Q8BI79 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
Ccdc40Q8BI79 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Ccdc40Q8BI79 Gm14825-201ENSMUST00000113538 701 ntBASIC3.23□□□□□ -1.89
Ccdc40Q8BI79 Gm13751-201ENSMUST00000120280 752 ntBASIC3.23□□□□□ -1.89
Ccdc40Q8BI79 Gm14069-201ENSMUST00000120815 229 ntBASIC3.23□□□□□ -1.89
Ccdc40Q8BI79 Gm26477-201ENSMUST00000122617 323 ntBASIC3.23□□□□□ -1.89
Ccdc40Q8BI79 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
Ccdc40Q8BI79 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Ccdc40Q8BI79 Gm24754-201ENSMUST00000177997 107 ntBASIC3.23□□□□□ -1.89
Ccdc40Q8BI79 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Ccdc40Q8BI79 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC3.23□□□□□ -1.89
Ccdc40Q8BI79 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Ccdc40Q8BI79 Gm19202-201ENSMUST00000198096 808 ntBASIC3.23□□□□□ -1.89
Ccdc40Q8BI79 Amd-ps5-201ENSMUST00000198406 989 ntBASIC3.23□□□□□ -1.89
Ccdc40Q8BI79 Igkv4-60-201ENSMUST00000200639 358 ntBASIC3.23□□□□□ -1.89
Ccdc40Q8BI79 Gm29920-201ENSMUST00000206876 754 ntBASIC3.23□□□□□ -1.89
Ccdc40Q8BI79 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC3.23□□□□□ -1.89
Ccdc40Q8BI79 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC3.23□□□□□ -1.89
Ccdc40Q8BI79 CT573422.1-201ENSMUST00000216655 405 ntBASIC3.23□□□□□ -1.89
Ccdc40Q8BI79 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.23□□□□□ -1.89
Ccdc40Q8BI79 CT030684.2-201ENSMUST00000228946 826 ntBASIC3.23□□□□□ -1.89
Ccdc40Q8BI79 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Ccdc40Q8BI79 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Ccdc40Q8BI79 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Ccdc40Q8BI79 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Ccdc40Q8BI79 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC3.23□□□□□ -1.89
Ccdc40Q8BI79 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Ccdc40Q8BI79 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Ccdc40Q8BI79 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.22□□□□□ -1.89
Ccdc40Q8BI79 Gm20679-201ENSMUST00000177285 1402 ntBASIC3.22□□□□□ -1.89
Ccdc40Q8BI79 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Ccdc40Q8BI79 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Ccdc40Q8BI79 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Ccdc40Q8BI79 Gm22543-201ENSMUST00000104347 94 ntBASIC3.22□□□□□ -1.89
Ccdc40Q8BI79 Gm23609-201ENSMUST00000104542 127 ntBASIC3.22□□□□□ -1.89
Ccdc40Q8BI79 Gm14739-201ENSMUST00000120424 802 ntBASIC3.22□□□□□ -1.89
Ccdc40Q8BI79 Mup-ps17-201ENSMUST00000120723 218 ntBASIC3.22□□□□□ -1.89
Ccdc40Q8BI79 Gm12755-201ENSMUST00000122297 282 ntBASIC3.22□□□□□ -1.89
Ccdc40Q8BI79 Gm24534-201ENSMUST00000157949 291 ntBASIC3.22□□□□□ -1.89
Ccdc40Q8BI79 Gm24532-201ENSMUST00000157951 286 ntBASIC3.22□□□□□ -1.89
Ccdc40Q8BI79 Gm24552-201ENSMUST00000158646 103 ntBASIC3.22□□□□□ -1.89
Ccdc40Q8BI79 Gm17164-201ENSMUST00000169013 506 ntBASIC3.22□□□□□ -1.89
Ccdc40Q8BI79 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Ccdc40Q8BI79 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Ccdc40Q8BI79 Gm24111-201ENSMUST00000175491 97 ntBASIC3.22□□□□□ -1.89
Ccdc40Q8BI79 Gm20698-201ENSMUST00000175657 233 ntBASIC3.22□□□□□ -1.89
Ccdc40Q8BI79 Gm29045-201ENSMUST00000187278 698 ntBASIC3.22□□□□□ -1.89
Ccdc40Q8BI79 Gm9696-202ENSMUST00000191541 830 ntBASIC3.22□□□□□ -1.89
Ccdc40Q8BI79 Gm38214-201ENSMUST00000192581 988 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms