Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Usp6nlQ80XC3 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Usp6nlQ80XC3 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.82□□□□□ -1.8
Usp6nlQ80XC3 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.82□□□□□ -1.8
Usp6nlQ80XC3 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.82□□□□□ -1.8
Usp6nlQ80XC3 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Usp6nlQ80XC3 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
Usp6nlQ80XC3 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Usp6nlQ80XC3 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Usp6nlQ80XC3 Gm22709-201ENSMUST00000116893 111 ntBASIC3.81□□□□□ -1.8
Usp6nlQ80XC3 Gm6797-201ENSMUST00000119440 512 ntBASIC3.81□□□□□ -1.8
Usp6nlQ80XC3 Gm12706-201ENSMUST00000121588 698 ntBASIC3.81□□□□□ -1.8
Usp6nlQ80XC3 Gm6762-201ENSMUST00000121769 289 ntBASIC3.81□□□□□ -1.8
Usp6nlQ80XC3 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC3.81□□□□□ -1.8
Usp6nlQ80XC3 Gm26173-201ENSMUST00000158416 136 ntBASIC3.81□□□□□ -1.8
Usp6nlQ80XC3 Gm25490-201ENSMUST00000158734 130 ntBASIC3.81□□□□□ -1.8
Usp6nlQ80XC3 Gm23025-201ENSMUST00000158769 111 ntBASIC3.81□□□□□ -1.8
Usp6nlQ80XC3 Gm26991-201ENSMUST00000180950 620 ntBASIC3.81□□□□□ -1.8
Usp6nlQ80XC3 Mir7k-201ENSMUST00000184115 110 ntBASIC3.81□□□□□ -1.8
Usp6nlQ80XC3 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Usp6nlQ80XC3 Gm43415-201ENSMUST00000201934 750 ntBASIC3.81□□□□□ -1.8
Usp6nlQ80XC3 Gm18672-201ENSMUST00000208035 270 ntBASIC3.81□□□□□ -1.8
Usp6nlQ80XC3 Gm45614-201ENSMUST00000209994 721 ntBASIC3.81□□□□□ -1.8
Usp6nlQ80XC3 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.81□□□□□ -1.8
Usp6nlQ80XC3 AC157017.2-201ENSMUST00000218354 777 ntBASIC3.81□□□□□ -1.8
Usp6nlQ80XC3 Gm9370-201ENSMUST00000222787 609 ntBASIC3.81□□□□□ -1.8
Usp6nlQ80XC3 AC102575.1-201ENSMUST00000225348 547 ntBASIC3.81□□□□□ -1.8
Usp6nlQ80XC3 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
Usp6nlQ80XC3 Gm24035-201ENSMUST00000082867 107 ntBASIC3.81□□□□□ -1.8
Usp6nlQ80XC3 Snora70-201ENSMUST00000083047 137 ntBASIC3.81□□□□□ -1.8
Usp6nlQ80XC3 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Usp6nlQ80XC3 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Usp6nlQ80XC3 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
Usp6nlQ80XC3 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Usp6nlQ80XC3 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Usp6nlQ80XC3 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC3.81□□□□□ -1.8
Usp6nlQ80XC3 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Usp6nlQ80XC3 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Usp6nlQ80XC3 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Usp6nlQ80XC3 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.8□□□□□ -1.8
Usp6nlQ80XC3 Mir294-201ENSMUST00000104710 84 ntBASIC3.8□□□□□ -1.8
Usp6nlQ80XC3 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC3.8□□□□□ -1.8
Usp6nlQ80XC3 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC3.8□□□□□ -1.8
Usp6nlQ80XC3 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC3.8□□□□□ -1.8
Usp6nlQ80XC3 Gm15113-201ENSMUST00000119280 836 ntBASIC3.8□□□□□ -1.8
Usp6nlQ80XC3 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC3.8□□□□□ -1.8
Usp6nlQ80XC3 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC3.8□□□□□ -1.8
Usp6nlQ80XC3 Gm12578-201ENSMUST00000121244 417 ntBASIC3.8□□□□□ -1.8
Usp6nlQ80XC3 Gm14581-201ENSMUST00000121726 198 ntBASIC3.8□□□□□ -1.8
Usp6nlQ80XC3 Gm2020-201ENSMUST00000145242 579 ntBASIC3.8□□□□□ -1.8
Usp6nlQ80XC3 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC3.8□□□□□ -1.8
Usp6nlQ80XC3 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC3.8□□□□□ -1.8
Usp6nlQ80XC3 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Usp6nlQ80XC3 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC3.8□□□□□ -1.8
Usp6nlQ80XC3 Gm23269-201ENSMUST00000178701 107 ntBASIC3.8□□□□□ -1.8
Usp6nlQ80XC3 Gm7870-201ENSMUST00000184467 616 ntBASIC3.8□□□□□ -1.8
Usp6nlQ80XC3 Gm27308-201ENSMUST00000184807 233 ntBASIC3.8□□□□□ -1.8
Usp6nlQ80XC3 Gm28666-201ENSMUST00000186649 274 ntBASIC3.8□□□□□ -1.8
Usp6nlQ80XC3 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Usp6nlQ80XC3 Gm37866-201ENSMUST00000191950 696 ntBASIC3.8□□□□□ -1.8
Usp6nlQ80XC3 Gm37732-201ENSMUST00000194377 316 ntBASIC3.8□□□□□ -1.8
Usp6nlQ80XC3 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC3.8□□□□□ -1.8
Usp6nlQ80XC3 Gm42465-201ENSMUST00000197036 492 ntBASIC3.8□□□□□ -1.8
Usp6nlQ80XC3 Gm31230-201ENSMUST00000199725 785 ntBASIC3.8□□□□□ -1.8
Usp6nlQ80XC3 Gm44887-201ENSMUST00000208980 178 ntBASIC3.8□□□□□ -1.8
Usp6nlQ80XC3 AC153529.1-201ENSMUST00000217818 370 ntBASIC3.8□□□□□ -1.8
Usp6nlQ80XC3 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC3.8□□□□□ -1.8
Usp6nlQ80XC3 Gm25792-201ENSMUST00000083289 100 ntBASIC3.8□□□□□ -1.8
Usp6nlQ80XC3 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Usp6nlQ80XC3 Gm44625-201ENSMUST00000207838 1561 ntBASIC3.8□□□□□ -1.8
Usp6nlQ80XC3 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.79□□□□□ -1.8
Usp6nlQ80XC3 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Usp6nlQ80XC3 Gm37848-201ENSMUST00000195288 3103 ntBASIC3.79□□□□□ -1.8
Usp6nlQ80XC3 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Usp6nlQ80XC3 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Usp6nlQ80XC3 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Usp6nlQ80XC3 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Usp6nlQ80XC3 Gm24430-201ENSMUST00000104077 104 ntBASIC3.79□□□□□ -1.8
Usp6nlQ80XC3 Gm25308-201ENSMUST00000104171 158 ntBASIC3.79□□□□□ -1.8
Usp6nlQ80XC3 Gm23747-201ENSMUST00000104228 131 ntBASIC3.79□□□□□ -1.8
Usp6nlQ80XC3 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC3.79□□□□□ -1.8
Usp6nlQ80XC3 Gm12598-201ENSMUST00000117333 830 ntBASIC3.79□□□□□ -1.8
Usp6nlQ80XC3 Gm12515-201ENSMUST00000120116 361 ntBASIC3.79□□□□□ -1.8
Usp6nlQ80XC3 Gm7308-201ENSMUST00000121087 447 ntBASIC3.79□□□□□ -1.8
Usp6nlQ80XC3 Gm15147-201ENSMUST00000122263 483 ntBASIC3.79□□□□□ -1.8
Usp6nlQ80XC3 Gm22988-201ENSMUST00000122759 144 ntBASIC3.79□□□□□ -1.8
Usp6nlQ80XC3 Gm26348-201ENSMUST00000157528 240 ntBASIC3.79□□□□□ -1.8
Usp6nlQ80XC3 Gm22765-201ENSMUST00000158371 128 ntBASIC3.79□□□□□ -1.8
Usp6nlQ80XC3 Gm26177-201ENSMUST00000178683 107 ntBASIC3.79□□□□□ -1.8
Usp6nlQ80XC3 Gm8649-201ENSMUST00000181799 233 ntBASIC3.79□□□□□ -1.8
Usp6nlQ80XC3 Mir6413-201ENSMUST00000184049 108 ntBASIC3.79□□□□□ -1.8
Usp6nlQ80XC3 Gm28113-201ENSMUST00000188280 229 ntBASIC3.79□□□□□ -1.8
Usp6nlQ80XC3 Gm44754-201ENSMUST00000208155 400 ntBASIC3.79□□□□□ -1.8
Usp6nlQ80XC3 AC166358.6-201ENSMUST00000221834 1206 ntBASIC3.79□□□□□ -1.8
Usp6nlQ80XC3 AC160930.1-201ENSMUST00000227194 337 ntBASIC3.79□□□□□ -1.8
Usp6nlQ80XC3 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC3.79□□□□□ -1.8
Usp6nlQ80XC3 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Usp6nlQ80XC3 Gm25581-201ENSMUST00000083410 164 ntBASIC3.79□□□□□ -1.8
Usp6nlQ80XC3 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Usp6nlQ80XC3 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms