Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Trbv8-201ENSMUST00000194020 285 ntBASIC3.84□□□□□ -1.79
Ubfd1Q78JW9 Gm18429-201ENSMUST00000198707 421 ntBASIC3.84□□□□□ -1.79
Ubfd1Q78JW9 Gm44142-201ENSMUST00000203358 311 ntBASIC3.84□□□□□ -1.79
Ubfd1Q78JW9 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC3.84□□□□□ -1.79
Ubfd1Q78JW9 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC3.84□□□□□ -1.79
Ubfd1Q78JW9 Gm7624-201ENSMUST00000209702 435 ntBASIC3.84□□□□□ -1.79
Ubfd1Q78JW9 Gm45387-201ENSMUST00000209792 632 ntBASIC3.84□□□□□ -1.79
Ubfd1Q78JW9 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC3.84□□□□□ -1.79
Ubfd1Q78JW9 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC3.84□□□□□ -1.79
Ubfd1Q78JW9 AC127270.2-201ENSMUST00000221337 247 ntBASIC3.84□□□□□ -1.79
Ubfd1Q78JW9 AC167192.2-201ENSMUST00000224794 198 ntBASIC3.84□□□□□ -1.79
Ubfd1Q78JW9 AC113031.5-201ENSMUST00000227116 606 ntBASIC3.84□□□□□ -1.79
Ubfd1Q78JW9 AC147545.1-201ENSMUST00000227528 108 ntBASIC3.84□□□□□ -1.79
Ubfd1Q78JW9 Gm25592-201ENSMUST00000082635 131 ntBASIC3.84□□□□□ -1.79
Ubfd1Q78JW9 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Ubfd1Q78JW9 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
Ubfd1Q78JW9 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
Ubfd1Q78JW9 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
Ubfd1Q78JW9 Gm37983-201ENSMUST00000193207 2006 ntBASIC3.83□□□□□ -1.8
Ubfd1Q78JW9 Gm37792-201ENSMUST00000195761 3413 ntBASIC3.83□□□□□ -1.8
Ubfd1Q78JW9 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
Ubfd1Q78JW9 Gm37211-201ENSMUST00000193392 3433 ntBASIC3.83□□□□□ -1.8
Ubfd1Q78JW9 Gm38073-201ENSMUST00000195141 3665 ntBASIC3.83□□□□□ -1.8
Ubfd1Q78JW9 Gm25420-201ENSMUST00000104216 127 ntBASIC3.83□□□□□ -1.8
Ubfd1Q78JW9 Mir1193-201ENSMUST00000116761 121 ntBASIC3.83□□□□□ -1.8
Ubfd1Q78JW9 Gm14649-201ENSMUST00000121814 324 ntBASIC3.83□□□□□ -1.8
Ubfd1Q78JW9 Gm15147-201ENSMUST00000122263 483 ntBASIC3.83□□□□□ -1.8
Ubfd1Q78JW9 Gm15899-201ENSMUST00000128586 238 ntBASIC3.83□□□□□ -1.8
Ubfd1Q78JW9 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC3.83□□□□□ -1.8
Ubfd1Q78JW9 Gm26276-201ENSMUST00000157099 109 ntBASIC3.83□□□□□ -1.8
Ubfd1Q78JW9 Gm24240-201ENSMUST00000157785 135 ntBASIC3.83□□□□□ -1.8
Ubfd1Q78JW9 Gm24898-201ENSMUST00000158133 106 ntBASIC3.83□□□□□ -1.8
Ubfd1Q78JW9 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC3.83□□□□□ -1.8
Ubfd1Q78JW9 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Ubfd1Q78JW9 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC3.83□□□□□ -1.8
Ubfd1Q78JW9 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
Ubfd1Q78JW9 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Ubfd1Q78JW9 Gm25817-201ENSMUST00000177758 121 ntBASIC3.83□□□□□ -1.8
Ubfd1Q78JW9 Gm6625-201ENSMUST00000177870 272 ntBASIC3.83□□□□□ -1.8
Ubfd1Q78JW9 Gm24766-201ENSMUST00000179182 121 ntBASIC3.83□□□□□ -1.8
Ubfd1Q78JW9 Gm21758-201ENSMUST00000179336 819 ntBASIC3.83□□□□□ -1.8
Ubfd1Q78JW9 Gm18291-201ENSMUST00000190791 301 ntBASIC3.83□□□□□ -1.8
Ubfd1Q78JW9 Gm19498-201ENSMUST00000191128 331 ntBASIC3.83□□□□□ -1.8
Ubfd1Q78JW9 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Ubfd1Q78JW9 Gm18964-201ENSMUST00000193013 563 ntBASIC3.83□□□□□ -1.8
Ubfd1Q78JW9 Gm31511-201ENSMUST00000193134 657 ntBASIC3.83□□□□□ -1.8
Ubfd1Q78JW9 Gm37431-201ENSMUST00000195102 111 ntBASIC3.83□□□□□ -1.8
Ubfd1Q78JW9 Gm8747-201ENSMUST00000195392 751 ntBASIC3.83□□□□□ -1.8
Ubfd1Q78JW9 Gm44391-201ENSMUST00000198490 93 ntBASIC3.83□□□□□ -1.8
Ubfd1Q78JW9 Gm7039-201ENSMUST00000205138 346 ntBASIC3.83□□□□□ -1.8
Ubfd1Q78JW9 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Ubfd1Q78JW9 Gm45438-201ENSMUST00000210242 564 ntBASIC3.83□□□□□ -1.8
Ubfd1Q78JW9 AC153141.1-201ENSMUST00000218636 501 ntBASIC3.83□□□□□ -1.8
Ubfd1Q78JW9 Gm18696-201ENSMUST00000220103 274 ntBASIC3.83□□□□□ -1.8
Ubfd1Q78JW9 Gm26055-201ENSMUST00000083038 107 ntBASIC3.83□□□□□ -1.8
Ubfd1Q78JW9 Gm23242-201ENSMUST00000083055 107 ntBASIC3.83□□□□□ -1.8
Ubfd1Q78JW9 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
Ubfd1Q78JW9 Olfr713-201ENSMUST00000098139 975 ntBASIC3.83□□□□□ -1.8
Ubfd1Q78JW9 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Ubfd1Q78JW9 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Ubfd1Q78JW9 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC3.83□□□□□ -1.8
Ubfd1Q78JW9 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Ubfd1Q78JW9 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Ubfd1Q78JW9 Gm10484-201ENSMUST00000196372 4759 ntBASIC3.83□□□□□ -1.8
Ubfd1Q78JW9 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Ubfd1Q78JW9 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Ubfd1Q78JW9 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.82□□□□□ -1.8
Ubfd1Q78JW9 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
Ubfd1Q78JW9 Gm36960-201ENSMUST00000195491 2035 ntBASIC3.82□□□□□ -1.8
Ubfd1Q78JW9 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Ubfd1Q78JW9 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Ubfd1Q78JW9 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Ubfd1Q78JW9 Gm26273-201ENSMUST00000104180 131 ntBASIC3.82□□□□□ -1.8
Ubfd1Q78JW9 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Ubfd1Q78JW9 Gm23987-201ENSMUST00000117039 129 ntBASIC3.82□□□□□ -1.8
Ubfd1Q78JW9 Gm11982-201ENSMUST00000121480 314 ntBASIC3.82□□□□□ -1.8
Ubfd1Q78JW9 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC3.82□□□□□ -1.8
Ubfd1Q78JW9 Gm23887-201ENSMUST00000122683 172 ntBASIC3.82□□□□□ -1.8
Ubfd1Q78JW9 Gm24534-201ENSMUST00000157949 291 ntBASIC3.82□□□□□ -1.8
Ubfd1Q78JW9 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC3.82□□□□□ -1.8
Ubfd1Q78JW9 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Ubfd1Q78JW9 Gm19932-201ENSMUST00000177033 313 ntBASIC3.82□□□□□ -1.8
Ubfd1Q78JW9 Gm22633-201ENSMUST00000179834 107 ntBASIC3.82□□□□□ -1.8
Ubfd1Q78JW9 Gm28339-201ENSMUST00000185845 696 ntBASIC3.82□□□□□ -1.8
Ubfd1Q78JW9 Gm29062-201ENSMUST00000186032 694 ntBASIC3.82□□□□□ -1.8
Ubfd1Q78JW9 Gm28057-201ENSMUST00000186603 615 ntBASIC3.82□□□□□ -1.8
Ubfd1Q78JW9 Gm28896-201ENSMUST00000188609 696 ntBASIC3.82□□□□□ -1.8
Ubfd1Q78JW9 Gm20832-201ENSMUST00000189076 665 ntBASIC3.82□□□□□ -1.8
Ubfd1Q78JW9 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
Ubfd1Q78JW9 Gm28241-201ENSMUST00000190916 235 ntBASIC3.82□□□□□ -1.8
Ubfd1Q78JW9 Gm37353-201ENSMUST00000194497 313 ntBASIC3.82□□□□□ -1.8
Ubfd1Q78JW9 Gm38107-201ENSMUST00000194873 696 ntBASIC3.82□□□□□ -1.8
Ubfd1Q78JW9 Gm30638-201ENSMUST00000195570 656 ntBASIC3.82□□□□□ -1.8
Ubfd1Q78JW9 Gm36728-201ENSMUST00000195782 665 ntBASIC3.82□□□□□ -1.8
Ubfd1Q78JW9 Gm5034-201ENSMUST00000199115 634 ntBASIC3.82□□□□□ -1.8
Ubfd1Q78JW9 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Ubfd1Q78JW9 Gm45553-201ENSMUST00000209929 507 ntBASIC3.82□□□□□ -1.8
Ubfd1Q78JW9 AC153506.2-201ENSMUST00000218051 257 ntBASIC3.82□□□□□ -1.8
Ubfd1Q78JW9 AC158981.3-202ENSMUST00000228906 523 ntBASIC3.82□□□□□ -1.8
Ubfd1Q78JW9 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 113.9 ms