Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC2.56□□□□□ -2
Scn10aQ6QIY3 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC2.56□□□□□ -2
Scn10aQ6QIY3 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC2.56□□□□□ -2
Scn10aQ6QIY3 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC2.56□□□□□ -2
Scn10aQ6QIY3 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC2.56□□□□□ -2
Scn10aQ6QIY3 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC2.56□□□□□ -2
Scn10aQ6QIY3 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC2.56□□□□□ -2
Scn10aQ6QIY3 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC2.56□□□□□ -2
Scn10aQ6QIY3 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC2.56□□□□□ -2
Scn10aQ6QIY3 Mir6901-201ENSMUST00000185062 62 ntBASIC2.56□□□□□ -2
Scn10aQ6QIY3 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC2.56□□□□□ -2
Scn10aQ6QIY3 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC2.56□□□□□ -2
Scn10aQ6QIY3 Gm5175-202ENSMUST00000219699 529 ntBASIC2.56□□□□□ -2
Scn10aQ6QIY3 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC2.56□□□□□ -2
Scn10aQ6QIY3 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Scn10aQ6QIY3 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.56□□□□□ -2
Scn10aQ6QIY3 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.56□□□□□ -2
Scn10aQ6QIY3 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Scn10aQ6QIY3 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
Scn10aQ6QIY3 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
Scn10aQ6QIY3 Gm11253-201ENSMUST00000118486 201 ntBASIC2.56□□□□□ -2
Scn10aQ6QIY3 Gm14939-201ENSMUST00000120347 680 ntBASIC2.56□□□□□ -2
Scn10aQ6QIY3 Gm22517-201ENSMUST00000158265 136 ntBASIC2.56□□□□□ -2
Scn10aQ6QIY3 Gm23005-201ENSMUST00000158950 136 ntBASIC2.56□□□□□ -2
Scn10aQ6QIY3 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.56□□□□□ -2
Scn10aQ6QIY3 Gm38329-201ENSMUST00000193473 427 ntBASIC2.56□□□□□ -2
Scn10aQ6QIY3 Gm37732-201ENSMUST00000194377 316 ntBASIC2.56□□□□□ -2
Scn10aQ6QIY3 Igkv2-105-201ENSMUST00000196931 377 ntBASIC2.56□□□□□ -2
Scn10aQ6QIY3 Gm18660-201ENSMUST00000199542 629 ntBASIC2.56□□□□□ -2
Scn10aQ6QIY3 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.56□□□□□ -2
Scn10aQ6QIY3 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Scn10aQ6QIY3 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Scn10aQ6QIY3 Gm14421-201ENSMUST00000121755 1958 ntBASIC2.55□□□□□ -2
Scn10aQ6QIY3 Gm14771-201ENSMUST00000118249 203 ntBASIC2.55□□□□□ -2
Scn10aQ6QIY3 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC2.55□□□□□ -2
Scn10aQ6QIY3 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
Scn10aQ6QIY3 Gm44083-201ENSMUST00000203114 337 ntBASIC2.55□□□□□ -2
Scn10aQ6QIY3 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC2.55□□□□□ -2
Scn10aQ6QIY3 Gm19244-201ENSMUST00000204340 253 ntBASIC2.55□□□□□ -2
Scn10aQ6QIY3 AC158536.1-201ENSMUST00000222510 256 ntBASIC2.55□□□□□ -2
Scn10aQ6QIY3 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC2.55□□□□□ -2
Scn10aQ6QIY3 Gm42448-201ENSMUST00000197122 2644 ntBASIC2.55□□□□□ -2
Scn10aQ6QIY3 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Scn10aQ6QIY3 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.55□□□□□ -2
Scn10aQ6QIY3 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
Scn10aQ6QIY3 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.54□□□□□ -2
Scn10aQ6QIY3 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Scn10aQ6QIY3 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Scn10aQ6QIY3 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
Scn10aQ6QIY3 Gm37817-201ENSMUST00000195276 434 ntBASIC2.54□□□□□ -2
Scn10aQ6QIY3 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC2.54□□□□□ -2
Scn10aQ6QIY3 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC2.54□□□□□ -2
Scn10aQ6QIY3 AC164424.1-201ENSMUST00000221690 170 ntBASIC2.54□□□□□ -2
Scn10aQ6QIY3 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Scn10aQ6QIY3 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Scn10aQ6QIY3 Gm9850-201ENSMUST00000117916 227 ntBASIC2.54□□□□□ -2
Scn10aQ6QIY3 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC2.54□□□□□ -2
Scn10aQ6QIY3 Gm24317-201ENSMUST00000178536 107 ntBASIC2.54□□□□□ -2
Scn10aQ6QIY3 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC2.54□□□□□ -2
Scn10aQ6QIY3 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC2.54□□□□□ -2
Scn10aQ6QIY3 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC2.54□□□□□ -2
Scn10aQ6QIY3 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC2.54□□□□□ -2
Scn10aQ6QIY3 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC2.54□□□□□ -2
Scn10aQ6QIY3 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC2.54□□□□□ -2
Scn10aQ6QIY3 AC170086.1-201ENSMUST00000225190 497 ntBASIC2.54□□□□□ -2
Scn10aQ6QIY3 AC118639.1-201ENSMUST00000227204 338 ntBASIC2.54□□□□□ -2
Scn10aQ6QIY3 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Scn10aQ6QIY3 Gm43404-201ENSMUST00000200424 2534 ntBASIC2.54□□□□□ -2
Scn10aQ6QIY3 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Scn10aQ6QIY3 Gm23441-201ENSMUST00000157268 127 ntBASIC2.53□□□□□ -2
Scn10aQ6QIY3 Gm23289-201ENSMUST00000175615 108 ntBASIC2.53□□□□□ -2
Scn10aQ6QIY3 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC2.53□□□□□ -2
Scn10aQ6QIY3 Gm18406-201ENSMUST00000185872 669 ntBASIC2.53□□□□□ -2
Scn10aQ6QIY3 Gm43239-201ENSMUST00000200131 201 ntBASIC2.53□□□□□ -2
Scn10aQ6QIY3 AC159246.1-201ENSMUST00000214478 249 ntBASIC2.53□□□□□ -2
Scn10aQ6QIY3 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC2.53□□□□□ -2
Scn10aQ6QIY3 AC138401.1-201ENSMUST00000221533 116 ntBASIC2.53□□□□□ -2
Scn10aQ6QIY3 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Scn10aQ6QIY3 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC2.53□□□□□ -2
Scn10aQ6QIY3 Olfr203-201ENSMUST00000089305 924 ntBASIC2.53□□□□□ -2
Scn10aQ6QIY3 Gm25421-201ENSMUST00000104218 164 ntBASIC2.52□□□□□ -2.01
Scn10aQ6QIY3 Gm3940-201ENSMUST00000105087 432 ntBASIC2.52□□□□□ -2.01
Scn10aQ6QIY3 Gm15846-201ENSMUST00000116022 320 ntBASIC2.52□□□□□ -2.01
Scn10aQ6QIY3 Gm12492-201ENSMUST00000117665 564 ntBASIC2.52□□□□□ -2.01
Scn10aQ6QIY3 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Scn10aQ6QIY3 Gm18354-201ENSMUST00000173515 1068 ntBASIC2.52□□□□□ -2.01
Scn10aQ6QIY3 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC2.52□□□□□ -2.01
Scn10aQ6QIY3 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC2.52□□□□□ -2.01
Scn10aQ6QIY3 Gm43669-201ENSMUST00000198229 436 ntBASIC2.52□□□□□ -2.01
Scn10aQ6QIY3 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC2.52□□□□□ -2.01
Scn10aQ6QIY3 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC2.52□□□□□ -2.01
Scn10aQ6QIY3 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC2.52□□□□□ -2.01
Scn10aQ6QIY3 CT009713.6-201ENSMUST00000223615 294 ntBASIC2.52□□□□□ -2.01
Scn10aQ6QIY3 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Scn10aQ6QIY3 Gm26226-201ENSMUST00000082509 116 ntBASIC2.52□□□□□ -2.01
Scn10aQ6QIY3 Mir222-201ENSMUST00000083537 79 ntBASIC2.52□□□□□ -2.01
Scn10aQ6QIY3 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Scn10aQ6QIY3 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC2.52□□□□□ -2.01
Scn10aQ6QIY3 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Scn10aQ6QIY3 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms