Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Smarca1Q6PGB8 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Smarca1Q6PGB8 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.97□□□□□ -1.77
Smarca1Q6PGB8 Gm22115-201ENSMUST00000103976 133 ntBASIC3.97□□□□□ -1.77
Smarca1Q6PGB8 Gm23923-201ENSMUST00000104108 133 ntBASIC3.97□□□□□ -1.77
Smarca1Q6PGB8 Gm11813-201ENSMUST00000118586 291 ntBASIC3.97□□□□□ -1.77
Smarca1Q6PGB8 Gm14975-201ENSMUST00000118741 664 ntBASIC3.97□□□□□ -1.77
Smarca1Q6PGB8 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Smarca1Q6PGB8 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC3.97□□□□□ -1.77
Smarca1Q6PGB8 Gm3370-201ENSMUST00000171785 500 ntBASIC3.97□□□□□ -1.77
Smarca1Q6PGB8 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Smarca1Q6PGB8 Gm28010-201ENSMUST00000179485 126 ntBASIC3.97□□□□□ -1.77
Smarca1Q6PGB8 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC3.97□□□□□ -1.77
Smarca1Q6PGB8 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC3.97□□□□□ -1.77
Smarca1Q6PGB8 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.97□□□□□ -1.77
Smarca1Q6PGB8 Gm37727-201ENSMUST00000191637 819 ntBASIC3.97□□□□□ -1.77
Smarca1Q6PGB8 Gm36984-201ENSMUST00000192770 235 ntBASIC3.97□□□□□ -1.77
Smarca1Q6PGB8 Gm17966-201ENSMUST00000193453 594 ntBASIC3.97□□□□□ -1.77
Smarca1Q6PGB8 Gm9722-201ENSMUST00000194568 802 ntBASIC3.97□□□□□ -1.77
Smarca1Q6PGB8 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.97□□□□□ -1.77
Smarca1Q6PGB8 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.97□□□□□ -1.77
Smarca1Q6PGB8 Gm44355-201ENSMUST00000200417 104 ntBASIC3.97□□□□□ -1.77
Smarca1Q6PGB8 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC3.97□□□□□ -1.77
Smarca1Q6PGB8 Gm44208-201ENSMUST00000205199 421 ntBASIC3.97□□□□□ -1.77
Smarca1Q6PGB8 Gm45023-201ENSMUST00000207951 379 ntBASIC3.97□□□□□ -1.77
Smarca1Q6PGB8 Gm45327-201ENSMUST00000211612 565 ntBASIC3.97□□□□□ -1.77
Smarca1Q6PGB8 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC3.97□□□□□ -1.77
Smarca1Q6PGB8 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Smarca1Q6PGB8 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
Smarca1Q6PGB8 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Smarca1Q6PGB8 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC3.97□□□□□ -1.77
Smarca1Q6PGB8 AC116557.1-201ENSMUST00000219494 1521 ntBASIC3.96□□□□□ -1.78
Smarca1Q6PGB8 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.96□□□□□ -1.78
Smarca1Q6PGB8 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
Smarca1Q6PGB8 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.96□□□□□ -1.78
Smarca1Q6PGB8 Gm13046-201ENSMUST00000117391 501 ntBASIC3.96□□□□□ -1.78
Smarca1Q6PGB8 Gm15026-201ENSMUST00000119219 458 ntBASIC3.96□□□□□ -1.78
Smarca1Q6PGB8 Gm15112-201ENSMUST00000120152 860 ntBASIC3.96□□□□□ -1.78
Smarca1Q6PGB8 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC3.96□□□□□ -1.78
Smarca1Q6PGB8 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.96□□□□□ -1.78
Smarca1Q6PGB8 Gm25706-201ENSMUST00000157828 247 ntBASIC3.96□□□□□ -1.78
Smarca1Q6PGB8 Gm24393-201ENSMUST00000158135 97 ntBASIC3.96□□□□□ -1.78
Smarca1Q6PGB8 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
Smarca1Q6PGB8 Mir5127-201ENSMUST00000175295 71 ntBASIC3.96□□□□□ -1.78
Smarca1Q6PGB8 Gm22584-201ENSMUST00000177935 92 ntBASIC3.96□□□□□ -1.78
Smarca1Q6PGB8 Mir6372-201ENSMUST00000185114 109 ntBASIC3.96□□□□□ -1.78
Smarca1Q6PGB8 Gm18403-201ENSMUST00000192907 529 ntBASIC3.96□□□□□ -1.78
Smarca1Q6PGB8 Gm37701-201ENSMUST00000192947 1100 ntBASIC3.96□□□□□ -1.78
Smarca1Q6PGB8 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC3.96□□□□□ -1.78
Smarca1Q6PGB8 Gm38332-201ENSMUST00000194189 147 ntBASIC3.96□□□□□ -1.78
Smarca1Q6PGB8 Gm44295-201ENSMUST00000203805 437 ntBASIC3.96□□□□□ -1.78
Smarca1Q6PGB8 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC3.96□□□□□ -1.78
Smarca1Q6PGB8 AL669916.3-201ENSMUST00000213855 94 ntBASIC3.96□□□□□ -1.78
Smarca1Q6PGB8 AL669916.6-201ENSMUST00000214610 94 ntBASIC3.96□□□□□ -1.78
Smarca1Q6PGB8 AL669916.4-201ENSMUST00000215976 94 ntBASIC3.96□□□□□ -1.78
Smarca1Q6PGB8 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC3.96□□□□□ -1.78
Smarca1Q6PGB8 AL669916.1-201ENSMUST00000217640 94 ntBASIC3.96□□□□□ -1.78
Smarca1Q6PGB8 Gm20304-201ENSMUST00000218168 444 ntBASIC3.96□□□□□ -1.78
Smarca1Q6PGB8 AC153526.1-201ENSMUST00000219750 190 ntBASIC3.96□□□□□ -1.78
Smarca1Q6PGB8 Gm46994-201ENSMUST00000221523 219 ntBASIC3.96□□□□□ -1.78
Smarca1Q6PGB8 Gm5955-201ENSMUST00000222712 219 ntBASIC3.96□□□□□ -1.78
Smarca1Q6PGB8 AC166369.1-201ENSMUST00000228126 351 ntBASIC3.96□□□□□ -1.78
Smarca1Q6PGB8 Gm7984-201ENSMUST00000060640 538 ntBASIC3.96□□□□□ -1.78
Smarca1Q6PGB8 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Smarca1Q6PGB8 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Smarca1Q6PGB8 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Smarca1Q6PGB8 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.96□□□□□ -1.78
Smarca1Q6PGB8 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Smarca1Q6PGB8 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Smarca1Q6PGB8 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
Smarca1Q6PGB8 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Smarca1Q6PGB8 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Smarca1Q6PGB8 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Smarca1Q6PGB8 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Smarca1Q6PGB8 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Smarca1Q6PGB8 Gm29730-201ENSMUST00000192986 1396 ntBASIC3.95□□□□□ -1.78
Smarca1Q6PGB8 Gm14751-201ENSMUST00000117693 222 ntBASIC3.95□□□□□ -1.78
Smarca1Q6PGB8 Gm11577-201ENSMUST00000118030 737 ntBASIC3.95□□□□□ -1.78
Smarca1Q6PGB8 Gm13406-201ENSMUST00000121991 256 ntBASIC3.95□□□□□ -1.78
Smarca1Q6PGB8 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC3.95□□□□□ -1.78
Smarca1Q6PGB8 Gm23326-201ENSMUST00000157419 105 ntBASIC3.95□□□□□ -1.78
Smarca1Q6PGB8 Gm23755-201ENSMUST00000157578 343 ntBASIC3.95□□□□□ -1.78
Smarca1Q6PGB8 Gm23666-201ENSMUST00000158053 116 ntBASIC3.95□□□□□ -1.78
Smarca1Q6PGB8 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Smarca1Q6PGB8 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC3.95□□□□□ -1.78
Smarca1Q6PGB8 Gm28339-201ENSMUST00000185845 696 ntBASIC3.95□□□□□ -1.78
Smarca1Q6PGB8 Gm29062-201ENSMUST00000186032 694 ntBASIC3.95□□□□□ -1.78
Smarca1Q6PGB8 Gm28057-201ENSMUST00000186603 615 ntBASIC3.95□□□□□ -1.78
Smarca1Q6PGB8 Gm29576-201ENSMUST00000188020 678 ntBASIC3.95□□□□□ -1.78
Smarca1Q6PGB8 Gm28896-201ENSMUST00000188609 696 ntBASIC3.95□□□□□ -1.78
Smarca1Q6PGB8 Gm29545-201ENSMUST00000188878 694 ntBASIC3.95□□□□□ -1.78
Smarca1Q6PGB8 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
Smarca1Q6PGB8 Gm28354-201ENSMUST00000190904 678 ntBASIC3.95□□□□□ -1.78
Smarca1Q6PGB8 Gm37433-201ENSMUST00000192695 678 ntBASIC3.95□□□□□ -1.78
Smarca1Q6PGB8 Gm37441-201ENSMUST00000194430 678 ntBASIC3.95□□□□□ -1.78
Smarca1Q6PGB8 Gm38107-201ENSMUST00000194873 696 ntBASIC3.95□□□□□ -1.78
Smarca1Q6PGB8 Gm19620-201ENSMUST00000195972 434 ntBASIC3.95□□□□□ -1.78
Smarca1Q6PGB8 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC3.95□□□□□ -1.78
Smarca1Q6PGB8 Gm44703-201ENSMUST00000205724 248 ntBASIC3.95□□□□□ -1.78
Smarca1Q6PGB8 Gm45590-201ENSMUST00000209715 262 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms