Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm12238-201ENSMUST00000127764 124 ntBASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 Gm23169-201ENSMUST00000157157 112 ntBASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 Gm22038-201ENSMUST00000157277 242 ntBASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 Gm23250-201ENSMUST00000157444 267 ntBASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 Gm24737-201ENSMUST00000158861 100 ntBASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 Gm20534-201ENSMUST00000172957 172 ntBASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 Gm25175-201ENSMUST00000178712 79 ntBASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 Gm24168-201ENSMUST00000178825 107 ntBASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 Gm23862-201ENSMUST00000180342 94 ntBASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 Gm9022-202ENSMUST00000183285 483 ntBASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 Gm5372-201ENSMUST00000187540 409 ntBASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 Gm4734-201ENSMUST00000200117 777 ntBASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 Gm43945-201ENSMUST00000203595 754 ntBASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 Gm43871-201ENSMUST00000204931 1955 ntBASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 AC129219.3-201ENSMUST00000223790 196 ntBASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 Gm25411-201ENSMUST00000083760 151 ntBASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 Olfr575-201ENSMUST00000084812 957 ntBASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 AC158921.1-201ENSMUST00000227861 3468 ntBASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
Rnf220Q6PDX6 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Rnf220Q6PDX6 Gm24275-201ENSMUST00000116780 146 ntBASIC4.07□□□□□ -1.76
Rnf220Q6PDX6 Gm15106-201ENSMUST00000119691 821 ntBASIC4.07□□□□□ -1.76
Rnf220Q6PDX6 Gm15142-201ENSMUST00000121013 856 ntBASIC4.07□□□□□ -1.76
Rnf220Q6PDX6 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC4.07□□□□□ -1.76
Rnf220Q6PDX6 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC4.07□□□□□ -1.76
Rnf220Q6PDX6 Gm10059-201ENSMUST00000131139 171 ntBASIC4.07□□□□□ -1.76
Rnf220Q6PDX6 Gm26171-201ENSMUST00000158422 131 ntBASIC4.07□□□□□ -1.76
Rnf220Q6PDX6 Gm26402-201ENSMUST00000158499 113 ntBASIC4.07□□□□□ -1.76
Rnf220Q6PDX6 Gm24666-201ENSMUST00000158937 167 ntBASIC4.07□□□□□ -1.76
Rnf220Q6PDX6 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC4.07□□□□□ -1.76
Rnf220Q6PDX6 Gm20428-201ENSMUST00000174365 283 ntBASIC4.07□□□□□ -1.76
Rnf220Q6PDX6 Mir7020-201ENSMUST00000183787 70 ntBASIC4.07□□□□□ -1.76
Rnf220Q6PDX6 Gm27245-201ENSMUST00000184385 376 ntBASIC4.07□□□□□ -1.76
Rnf220Q6PDX6 Gm28016-201ENSMUST00000184594 196 ntBASIC4.07□□□□□ -1.76
Rnf220Q6PDX6 Mir6715-201ENSMUST00000184990 57 ntBASIC4.07□□□□□ -1.76
Rnf220Q6PDX6 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Rnf220Q6PDX6 Gm28654-201ENSMUST00000189801 379 ntBASIC4.07□□□□□ -1.76
Rnf220Q6PDX6 Gm28069-201ENSMUST00000189926 214 ntBASIC4.07□□□□□ -1.76
Rnf220Q6PDX6 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Rnf220Q6PDX6 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC4.07□□□□□ -1.76
Rnf220Q6PDX6 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC4.07□□□□□ -1.76
Rnf220Q6PDX6 Igkv2-113-201ENSMUST00000196138 362 ntBASIC4.07□□□□□ -1.76
Rnf220Q6PDX6 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC4.07□□□□□ -1.76
Rnf220Q6PDX6 Gm5876-201ENSMUST00000203735 243 ntBASIC4.07□□□□□ -1.76
Rnf220Q6PDX6 Gm18007-201ENSMUST00000205019 844 ntBASIC4.07□□□□□ -1.76
Rnf220Q6PDX6 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Rnf220Q6PDX6 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
Rnf220Q6PDX6 AC138401.1-201ENSMUST00000221533 116 ntBASIC4.07□□□□□ -1.76
Rnf220Q6PDX6 CT009718.4-201ENSMUST00000221881 109 ntBASIC4.07□□□□□ -1.76
Rnf220Q6PDX6 CT025536.1-201ENSMUST00000226744 844 ntBASIC4.07□□□□□ -1.76
Rnf220Q6PDX6 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
Rnf220Q6PDX6 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Rnf220Q6PDX6 Snord21-201ENSMUST00000082519 94 ntBASIC4.07□□□□□ -1.76
Rnf220Q6PDX6 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Rnf220Q6PDX6 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
Rnf220Q6PDX6 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Rnf220Q6PDX6 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Rnf220Q6PDX6 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Rnf220Q6PDX6 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Rnf220Q6PDX6 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Rnf220Q6PDX6 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Rnf220Q6PDX6 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Rnf220Q6PDX6 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Rnf220Q6PDX6 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Rnf220Q6PDX6 Mir759-201ENSMUST00000103254 98 ntBASIC4.06□□□□□ -1.76
Rnf220Q6PDX6 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Rnf220Q6PDX6 Gm14852-201ENSMUST00000120065 647 ntBASIC4.06□□□□□ -1.76
Rnf220Q6PDX6 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Rnf220Q6PDX6 Gm25824-201ENSMUST00000157092 121 ntBASIC4.06□□□□□ -1.76
Rnf220Q6PDX6 Gm26278-201ENSMUST00000157098 132 ntBASIC4.06□□□□□ -1.76
Rnf220Q6PDX6 Gm25339-201ENSMUST00000157458 232 ntBASIC4.06□□□□□ -1.76
Rnf220Q6PDX6 Gm25982-201ENSMUST00000157920 101 ntBASIC4.06□□□□□ -1.76
Rnf220Q6PDX6 Gm28148-201ENSMUST00000186924 697 ntBASIC4.06□□□□□ -1.76
Rnf220Q6PDX6 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Rnf220Q6PDX6 Gm7858-201ENSMUST00000190177 622 ntBASIC4.06□□□□□ -1.76
Rnf220Q6PDX6 Gm37416-201ENSMUST00000193596 318 ntBASIC4.06□□□□□ -1.76
Rnf220Q6PDX6 Gm6059-201ENSMUST00000196903 340 ntBASIC4.06□□□□□ -1.76
Rnf220Q6PDX6 Gm44336-201ENSMUST00000203696 468 ntBASIC4.06□□□□□ -1.76
Rnf220Q6PDX6 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Rnf220Q6PDX6 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC4.06□□□□□ -1.76
Rnf220Q6PDX6 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC4.06□□□□□ -1.76
Rnf220Q6PDX6 Gm45380-201ENSMUST00000210465 315 ntBASIC4.06□□□□□ -1.76
Rnf220Q6PDX6 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 143.8 ms