Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Trim27Q62158 Gm26348-201ENSMUST00000157528 240 ntBASIC3.82□□□□□ -1.8
Trim27Q62158 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC3.82□□□□□ -1.8
Trim27Q62158 Gm29259-201ENSMUST00000186396 694 ntBASIC3.82□□□□□ -1.8
Trim27Q62158 Gm18956-201ENSMUST00000192857 480 ntBASIC3.82□□□□□ -1.8
Trim27Q62158 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3.82□□□□□ -1.8
Trim27Q62158 Gm19457-201ENSMUST00000200995 448 ntBASIC3.82□□□□□ -1.8
Trim27Q62158 Gm44050-201ENSMUST00000204263 527 ntBASIC3.82□□□□□ -1.8
Trim27Q62158 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC3.82□□□□□ -1.8
Trim27Q62158 Gm18488-201ENSMUST00000215082 364 ntBASIC3.82□□□□□ -1.8
Trim27Q62158 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC3.82□□□□□ -1.8
Trim27Q62158 CT009550.5-201ENSMUST00000226286 382 ntBASIC3.82□□□□□ -1.8
Trim27Q62158 Gm22740-201ENSMUST00000083439 109 ntBASIC3.82□□□□□ -1.8
Trim27Q62158 Gm4017-201ENSMUST00000084813 338 ntBASIC3.82□□□□□ -1.8
Trim27Q62158 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.82□□□□□ -1.8
Trim27Q62158 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.82□□□□□ -1.8
Trim27Q62158 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
Trim27Q62158 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Trim27Q62158 Gm43665-201ENSMUST00000198672 1659 ntBASIC3.81□□□□□ -1.8
Trim27Q62158 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Trim27Q62158 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
Trim27Q62158 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.81□□□□□ -1.8
Trim27Q62158 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.81□□□□□ -1.8
Trim27Q62158 Zfp640-202ENSMUST00000224116 1562 ntBASIC3.81□□□□□ -1.8
Trim27Q62158 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Trim27Q62158 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Trim27Q62158 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Trim27Q62158 Gm6587-201ENSMUST00000120219 613 ntBASIC3.81□□□□□ -1.8
Trim27Q62158 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC3.81□□□□□ -1.8
Trim27Q62158 Gm23505-201ENSMUST00000158989 130 ntBASIC3.81□□□□□ -1.8
Trim27Q62158 Gm3102-201ENSMUST00000164236 489 ntBASIC3.81□□□□□ -1.8
Trim27Q62158 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Trim27Q62158 Gm2930-201ENSMUST00000170403 474 ntBASIC3.81□□□□□ -1.8
Trim27Q62158 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Trim27Q62158 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Trim27Q62158 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Trim27Q62158 Gm23648-201ENSMUST00000180301 107 ntBASIC3.81□□□□□ -1.8
Trim27Q62158 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.81□□□□□ -1.8
Trim27Q62158 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC3.81□□□□□ -1.8
Trim27Q62158 Gm28339-201ENSMUST00000185845 696 ntBASIC3.81□□□□□ -1.8
Trim27Q62158 Gm29062-201ENSMUST00000186032 694 ntBASIC3.81□□□□□ -1.8
Trim27Q62158 Gm29545-201ENSMUST00000188878 694 ntBASIC3.81□□□□□ -1.8
Trim27Q62158 Gm37751-201ENSMUST00000192440 1198 ntBASIC3.81□□□□□ -1.8
Trim27Q62158 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC3.81□□□□□ -1.8
Trim27Q62158 Gm18748-201ENSMUST00000198507 622 ntBASIC3.81□□□□□ -1.8
Trim27Q62158 Gm42526-201ENSMUST00000198956 393 ntBASIC3.81□□□□□ -1.8
Trim27Q62158 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Trim27Q62158 AC115047.1-201ENSMUST00000213795 322 ntBASIC3.81□□□□□ -1.8
Trim27Q62158 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
Trim27Q62158 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC3.81□□□□□ -1.8
Trim27Q62158 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Trim27Q62158 Gm32300-201ENSMUST00000221735 515 ntBASIC3.81□□□□□ -1.8
Trim27Q62158 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Trim27Q62158 Gm9845-201ENSMUST00000056409 598 ntBASIC3.81□□□□□ -1.8
Trim27Q62158 Gm23506-201ENSMUST00000083077 107 ntBASIC3.81□□□□□ -1.8
Trim27Q62158 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Trim27Q62158 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Trim27Q62158 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.81□□□□□ -1.8
Trim27Q62158 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Trim27Q62158 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
Trim27Q62158 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
Trim27Q62158 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.81□□□□□ -1.8
Trim27Q62158 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.81□□□□□ -1.8
Trim27Q62158 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
Trim27Q62158 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Trim27Q62158 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Trim27Q62158 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Trim27Q62158 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Trim27Q62158 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Trim27Q62158 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC3.8□□□□□ -1.8
Trim27Q62158 Gm23168-201ENSMUST00000157156 143 ntBASIC3.8□□□□□ -1.8
Trim27Q62158 Gm25341-201ENSMUST00000157461 268 ntBASIC3.8□□□□□ -1.8
Trim27Q62158 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Trim27Q62158 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Trim27Q62158 Gm20534-201ENSMUST00000172957 172 ntBASIC3.8□□□□□ -1.8
Trim27Q62158 Gm27676-201ENSMUST00000183669 61 ntBASIC3.8□□□□□ -1.8
Trim27Q62158 Gm17929-201ENSMUST00000186851 627 ntBASIC3.8□□□□□ -1.8
Trim27Q62158 Gm29602-201ENSMUST00000186887 442 ntBASIC3.8□□□□□ -1.8
Trim27Q62158 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC3.8□□□□□ -1.8
Trim27Q62158 Gm43171-201ENSMUST00000199882 291 ntBASIC3.8□□□□□ -1.8
Trim27Q62158 Gm43810-201ENSMUST00000201018 232 ntBASIC3.8□□□□□ -1.8
Trim27Q62158 Gm45273-201ENSMUST00000211559 281 ntBASIC3.8□□□□□ -1.8
Trim27Q62158 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC3.8□□□□□ -1.8
Trim27Q62158 AC164116.2-201ENSMUST00000225398 1038 ntBASIC3.8□□□□□ -1.8
Trim27Q62158 Gm26129-201ENSMUST00000082719 107 ntBASIC3.8□□□□□ -1.8
Trim27Q62158 Mir184-201ENSMUST00000083662 69 ntBASIC3.8□□□□□ -1.8
Trim27Q62158 Gm24446-201ENSMUST00000083982 156 ntBASIC3.8□□□□□ -1.8
Trim27Q62158 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Trim27Q62158 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.79□□□□□ -1.8
Trim27Q62158 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
Trim27Q62158 Gm14518-201ENSMUST00000117351 542 ntBASIC3.79□□□□□ -1.8
Trim27Q62158 Gm14007-201ENSMUST00000118288 210 ntBASIC3.79□□□□□ -1.8
Trim27Q62158 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC3.79□□□□□ -1.8
Trim27Q62158 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Trim27Q62158 Gm17054-201ENSMUST00000169811 259 ntBASIC3.79□□□□□ -1.8
Trim27Q62158 Gm3370-201ENSMUST00000171785 500 ntBASIC3.79□□□□□ -1.8
Trim27Q62158 Gm27599-201ENSMUST00000183758 174 ntBASIC3.79□□□□□ -1.8
Trim27Q62158 Gm8676-201ENSMUST00000184206 637 ntBASIC3.79□□□□□ -1.8
Trim27Q62158 Gm28574-201ENSMUST00000185757 699 ntBASIC3.79□□□□□ -1.8
Trim27Q62158 Gm28781-201ENSMUST00000185760 696 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms