Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CtcfQ61164 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CtcfQ61164 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
CtcfQ61164 Gm25213-201ENSMUST00000102388 113 ntBASIC3.93□□□□□ -1.78
CtcfQ61164 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CtcfQ61164 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC3.93□□□□□ -1.78
CtcfQ61164 Gm12016-201ENSMUST00000119079 681 ntBASIC3.93□□□□□ -1.78
CtcfQ61164 Gm11512-201ENSMUST00000119669 663 ntBASIC3.93□□□□□ -1.78
CtcfQ61164 Gm12578-201ENSMUST00000121244 417 ntBASIC3.93□□□□□ -1.78
CtcfQ61164 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC3.93□□□□□ -1.78
CtcfQ61164 Mup-ps12-201ENSMUST00000126217 549 ntBASIC3.93□□□□□ -1.78
CtcfQ61164 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC3.93□□□□□ -1.78
CtcfQ61164 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC3.93□□□□□ -1.78
CtcfQ61164 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC3.93□□□□□ -1.78
CtcfQ61164 Gm16101-201ENSMUST00000160695 430 ntBASIC3.93□□□□□ -1.78
CtcfQ61164 Gm26219-201ENSMUST00000175216 71 ntBASIC3.93□□□□□ -1.78
CtcfQ61164 Snord116l12-201ENSMUST00000179816 94 ntBASIC3.93□□□□□ -1.78
CtcfQ61164 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC3.93□□□□□ -1.78
CtcfQ61164 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC3.93□□□□□ -1.78
CtcfQ61164 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC3.93□□□□□ -1.78
CtcfQ61164 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CtcfQ61164 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC3.93□□□□□ -1.78
CtcfQ61164 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CtcfQ61164 Gm38076-201ENSMUST00000193889 450 ntBASIC3.93□□□□□ -1.78
CtcfQ61164 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC3.93□□□□□ -1.78
CtcfQ61164 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC3.93□□□□□ -1.78
CtcfQ61164 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC3.93□□□□□ -1.78
CtcfQ61164 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC3.93□□□□□ -1.78
CtcfQ61164 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC3.93□□□□□ -1.78
CtcfQ61164 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC3.93□□□□□ -1.78
CtcfQ61164 Gm10042-201ENSMUST00000079884 78 ntBASIC3.93□□□□□ -1.78
CtcfQ61164 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.93□□□□□ -1.78
CtcfQ61164 AC158805.1-201ENSMUST00000218197 2631 ntBASIC3.93□□□□□ -1.78
CtcfQ61164 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC3.93□□□□□ -1.78
CtcfQ61164 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CtcfQ61164 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.93□□□□□ -1.78
CtcfQ61164 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
CtcfQ61164 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.93□□□□□ -1.78
CtcfQ61164 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CtcfQ61164 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CtcfQ61164 Gm24120-201ENSMUST00000103978 129 ntBASIC3.92□□□□□ -1.78
CtcfQ61164 Gm12492-201ENSMUST00000117665 564 ntBASIC3.92□□□□□ -1.78
CtcfQ61164 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC3.92□□□□□ -1.78
CtcfQ61164 Gm11693-201ENSMUST00000119625 565 ntBASIC3.92□□□□□ -1.78
CtcfQ61164 Gm15266-201ENSMUST00000119635 255 ntBASIC3.92□□□□□ -1.78
CtcfQ61164 Gm16005-201ENSMUST00000120515 269 ntBASIC3.92□□□□□ -1.78
CtcfQ61164 Gm6079-201ENSMUST00000121356 404 ntBASIC3.92□□□□□ -1.78
CtcfQ61164 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.92□□□□□ -1.78
CtcfQ61164 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CtcfQ61164 Gm14651-201ENSMUST00000147192 442 ntBASIC3.92□□□□□ -1.78
CtcfQ61164 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC3.92□□□□□ -1.78
CtcfQ61164 Gm25559-201ENSMUST00000157182 74 ntBASIC3.92□□□□□ -1.78
CtcfQ61164 Gm23084-201ENSMUST00000157850 114 ntBASIC3.92□□□□□ -1.78
CtcfQ61164 Gm22890-201ENSMUST00000158642 144 ntBASIC3.92□□□□□ -1.78
CtcfQ61164 Ear-ps3-201ENSMUST00000168308 445 ntBASIC3.92□□□□□ -1.78
CtcfQ61164 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
CtcfQ61164 Mir7676-1-201ENSMUST00000183491 62 ntBASIC3.92□□□□□ -1.78
CtcfQ61164 Mir7676-2-201ENSMUST00000183523 62 ntBASIC3.92□□□□□ -1.78
CtcfQ61164 Gm27957-201ENSMUST00000184054 127 ntBASIC3.92□□□□□ -1.78
CtcfQ61164 Gm27189-201ENSMUST00000184119 190 ntBASIC3.92□□□□□ -1.78
CtcfQ61164 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC3.92□□□□□ -1.78
CtcfQ61164 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC3.92□□□□□ -1.78
CtcfQ61164 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC3.92□□□□□ -1.78
CtcfQ61164 Gm44726-201ENSMUST00000203427 217 ntBASIC3.92□□□□□ -1.78
CtcfQ61164 Gm45063-201ENSMUST00000203726 472 ntBASIC3.92□□□□□ -1.78
CtcfQ61164 Gm45673-201ENSMUST00000210293 358 ntBASIC3.92□□□□□ -1.78
CtcfQ61164 Gm39147-201ENSMUST00000211376 465 ntBASIC3.92□□□□□ -1.78
CtcfQ61164 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC3.92□□□□□ -1.78
CtcfQ61164 AC163295.1-201ENSMUST00000227840 314 ntBASIC3.92□□□□□ -1.78
CtcfQ61164 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CtcfQ61164 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CtcfQ61164 AC124572.2-201ENSMUST00000218041 5152 ntBASIC3.92□□□□□ -1.78
CtcfQ61164 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CtcfQ61164 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.92□□□□□ -1.78
CtcfQ61164 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.92□□□□□ -1.78
CtcfQ61164 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
CtcfQ61164 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC3.92□□□□□ -1.78
CtcfQ61164 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CtcfQ61164 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CtcfQ61164 Gm24430-201ENSMUST00000104077 104 ntBASIC3.91□□□□□ -1.78
CtcfQ61164 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.91□□□□□ -1.78
CtcfQ61164 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.91□□□□□ -1.78
CtcfQ61164 Gm15613-201ENSMUST00000118396 326 ntBASIC3.91□□□□□ -1.78
CtcfQ61164 Gm13349-201ENSMUST00000118436 411 ntBASIC3.91□□□□□ -1.78
CtcfQ61164 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC3.91□□□□□ -1.78
CtcfQ61164 Gm24505-201ENSMUST00000157682 126 ntBASIC3.91□□□□□ -1.78
CtcfQ61164 Gm22076-201ENSMUST00000158601 84 ntBASIC3.91□□□□□ -1.78
CtcfQ61164 Gm16353-201ENSMUST00000159458 1223 ntBASIC3.91□□□□□ -1.78
CtcfQ61164 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CtcfQ61164 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC3.91□□□□□ -1.78
CtcfQ61164 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC3.91□□□□□ -1.78
CtcfQ61164 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC3.91□□□□□ -1.78
CtcfQ61164 Gm9892-201ENSMUST00000182415 992 ntBASIC3.91□□□□□ -1.78
CtcfQ61164 Gm17929-201ENSMUST00000186851 627 ntBASIC3.91□□□□□ -1.78
CtcfQ61164 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC3.91□□□□□ -1.78
CtcfQ61164 Gm19498-201ENSMUST00000191128 331 ntBASIC3.91□□□□□ -1.78
CtcfQ61164 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC3.91□□□□□ -1.78
CtcfQ61164 Gm7449-201ENSMUST00000194393 663 ntBASIC3.91□□□□□ -1.78
CtcfQ61164 Gm37817-201ENSMUST00000195276 434 ntBASIC3.91□□□□□ -1.78
CtcfQ61164 Gm37404-201ENSMUST00000195726 359 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms