Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 CT030184.1-201ENSMUST00000222393 416 ntBASIC2.84□□□□□ -1.95
Usf1Q61069 Gm18026-201ENSMUST00000222789 727 ntBASIC2.84□□□□□ -1.95
Usf1Q61069 AC154594.1-201ENSMUST00000225171 1273 ntBASIC2.84□□□□□ -1.95
Usf1Q61069 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Usf1Q61069 AC115357.1-201ENSMUST00000227575 466 ntBASIC2.84□□□□□ -1.95
Usf1Q61069 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Usf1Q61069 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Usf1Q61069 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
Usf1Q61069 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
Usf1Q61069 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.96
Usf1Q61069 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC2.83□□□□□ -1.96
Usf1Q61069 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Usf1Q61069 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Usf1Q61069 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Usf1Q61069 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Usf1Q61069 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Usf1Q61069 Gm16445-201ENSMUST00000120399 714 ntBASIC2.83□□□□□ -1.96
Usf1Q61069 n-R5s32-201ENSMUST00000122495 103 ntBASIC2.83□□□□□ -1.96
Usf1Q61069 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC2.83□□□□□ -1.96
Usf1Q61069 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC2.83□□□□□ -1.96
Usf1Q61069 Ear-ps3-201ENSMUST00000168308 445 ntBASIC2.83□□□□□ -1.96
Usf1Q61069 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC2.83□□□□□ -1.96
Usf1Q61069 Gm4761-201ENSMUST00000178086 582 ntBASIC2.83□□□□□ -1.96
Usf1Q61069 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Usf1Q61069 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Usf1Q61069 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Usf1Q61069 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC2.83□□□□□ -1.96
Usf1Q61069 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Usf1Q61069 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC2.83□□□□□ -1.96
Usf1Q61069 Gm9379-201ENSMUST00000196790 646 ntBASIC2.83□□□□□ -1.96
Usf1Q61069 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Usf1Q61069 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
Usf1Q61069 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Usf1Q61069 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
Usf1Q61069 Snord7-201ENSMUST00000083781 97 ntBASIC2.83□□□□□ -1.96
Usf1Q61069 Gm22864-201ENSMUST00000083950 130 ntBASIC2.83□□□□□ -1.96
Usf1Q61069 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Usf1Q61069 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Usf1Q61069 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Usf1Q61069 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Usf1Q61069 Gm6982-201ENSMUST00000118752 1560 ntBASIC2.83□□□□□ -1.96
Usf1Q61069 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Usf1Q61069 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Usf1Q61069 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC2.82□□□□□ -1.96
Usf1Q61069 Gm12858-201ENSMUST00000121913 208 ntBASIC2.82□□□□□ -1.96
Usf1Q61069 Gm23183-201ENSMUST00000122595 323 ntBASIC2.82□□□□□ -1.96
Usf1Q61069 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC2.82□□□□□ -1.96
Usf1Q61069 Gm23268-201ENSMUST00000175494 78 ntBASIC2.82□□□□□ -1.96
Usf1Q61069 Gm26701-201ENSMUST00000181571 234 ntBASIC2.82□□□□□ -1.96
Usf1Q61069 Gm26933-201ENSMUST00000182320 827 ntBASIC2.82□□□□□ -1.96
Usf1Q61069 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Usf1Q61069 Gm38213-201ENSMUST00000193203 173 ntBASIC2.82□□□□□ -1.96
Usf1Q61069 Trbv7-201ENSMUST00000193339 402 ntBASIC2.82□□□□□ -1.96
Usf1Q61069 Gm37428-201ENSMUST00000193886 137 ntBASIC2.82□□□□□ -1.96
Usf1Q61069 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC2.82□□□□□ -1.96
Usf1Q61069 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC2.82□□□□□ -1.96
Usf1Q61069 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC2.82□□□□□ -1.96
Usf1Q61069 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Usf1Q61069 Gm45038-201ENSMUST00000207537 3838 ntBASIC2.82□□□□□ -1.96
Usf1Q61069 Gm45273-201ENSMUST00000211559 281 ntBASIC2.82□□□□□ -1.96
Usf1Q61069 AC154224.1-201ENSMUST00000224367 403 ntBASIC2.82□□□□□ -1.96
Usf1Q61069 AC134335.1-201ENSMUST00000227626 329 ntBASIC2.82□□□□□ -1.96
Usf1Q61069 AC156574.2-201ENSMUST00000228023 282 ntBASIC2.82□□□□□ -1.96
Usf1Q61069 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Usf1Q61069 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Usf1Q61069 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Usf1Q61069 Gm7171-201ENSMUST00000177413 1349 ntBASIC2.82□□□□□ -1.96
Usf1Q61069 Gm42585-201ENSMUST00000198731 4020 ntBASIC2.82□□□□□ -1.96
Usf1Q61069 Gm6207-201ENSMUST00000120075 1386 ntBASIC2.82□□□□□ -1.96
Usf1Q61069 Gm6228-201ENSMUST00000178856 1386 ntBASIC2.82□□□□□ -1.96
Usf1Q61069 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Usf1Q61069 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Usf1Q61069 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC2.82□□□□□ -1.96
Usf1Q61069 Gm7648-201ENSMUST00000173036 1658 ntBASIC2.82□□□□□ -1.96
Usf1Q61069 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC2.82□□□□□ -1.96
Usf1Q61069 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Usf1Q61069 Gm44925-201ENSMUST00000208879 2110 ntBASIC2.81□□□□□ -1.96
Usf1Q61069 Gm14537-201ENSMUST00000117464 599 ntBASIC2.81□□□□□ -1.96
Usf1Q61069 Gm13082-201ENSMUST00000118877 561 ntBASIC2.81□□□□□ -1.96
Usf1Q61069 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC2.81□□□□□ -1.96
Usf1Q61069 Gm13555-201ENSMUST00000121668 319 ntBASIC2.81□□□□□ -1.96
Usf1Q61069 Gm15733-201ENSMUST00000132957 242 ntBASIC2.81□□□□□ -1.96
Usf1Q61069 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.81□□□□□ -1.96
Usf1Q61069 Gm22769-201ENSMUST00000158367 98 ntBASIC2.81□□□□□ -1.96
Usf1Q61069 Gm3370-201ENSMUST00000171785 500 ntBASIC2.81□□□□□ -1.96
Usf1Q61069 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC2.81□□□□□ -1.96
Usf1Q61069 Gm25360-201ENSMUST00000178786 191 ntBASIC2.81□□□□□ -1.96
Usf1Q61069 Gm28688-201ENSMUST00000187301 268 ntBASIC2.81□□□□□ -1.96
Usf1Q61069 Gm29740-201ENSMUST00000193182 655 ntBASIC2.81□□□□□ -1.96
Usf1Q61069 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Usf1Q61069 Gm43115-201ENSMUST00000196244 160 ntBASIC2.81□□□□□ -1.96
Usf1Q61069 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC2.81□□□□□ -1.96
Usf1Q61069 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC2.81□□□□□ -1.96
Usf1Q61069 CT030247.1-201ENSMUST00000216810 267 ntBASIC2.81□□□□□ -1.96
Usf1Q61069 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC2.81□□□□□ -1.96
Usf1Q61069 Gm35558-202ENSMUST00000221819 499 ntBASIC2.81□□□□□ -1.96
Usf1Q61069 Gm9628-201ENSMUST00000222169 725 ntBASIC2.81□□□□□ -1.96
Usf1Q61069 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Usf1Q61069 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Usf1Q61069 Gm42446-201ENSMUST00000199783 3284 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms