Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Ccdc88aQ5SNZ0 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Ccdc88aQ5SNZ0 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Ccdc88aQ5SNZ0 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC2.7□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm14623-201ENSMUST00000121398 603 ntBASIC2.7□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm15530-201ENSMUST00000122206 555 ntBASIC2.7□□□□□ -1.98
Ccdc88aQ5SNZ0 Mir669n-201ENSMUST00000158636 54 ntBASIC2.7□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm24666-201ENSMUST00000158937 167 ntBASIC2.7□□□□□ -1.98
Ccdc88aQ5SNZ0 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
Ccdc88aQ5SNZ0 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC2.7□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm37616-201ENSMUST00000193974 322 ntBASIC2.7□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm5309-201ENSMUST00000197416 677 ntBASIC2.7□□□□□ -1.98
Ccdc88aQ5SNZ0 Mir3087-201ENSMUST00000199405 56 ntBASIC2.7□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm44425-201ENSMUST00000203739 429 ntBASIC2.7□□□□□ -1.98
Ccdc88aQ5SNZ0 AC158392.1-201ENSMUST00000223720 1069 ntBASIC2.7□□□□□ -1.98
Ccdc88aQ5SNZ0 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Ccdc88aQ5SNZ0 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Ccdc88aQ5SNZ0 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC2.7□□□□□ -1.98
Ccdc88aQ5SNZ0 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Ccdc88aQ5SNZ0 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm42448-201ENSMUST00000197122 2644 ntBASIC2.7□□□□□ -1.98
Ccdc88aQ5SNZ0 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm9496-201ENSMUST00000191295 1601 ntBASIC2.69□□□□□ -1.98
Ccdc88aQ5SNZ0 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm23885-201ENSMUST00000122682 294 ntBASIC2.69□□□□□ -1.98
Ccdc88aQ5SNZ0 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC2.69□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC2.69□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm6615-201ENSMUST00000199426 631 ntBASIC2.69□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.69□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm17890-201ENSMUST00000221419 757 ntBASIC2.69□□□□□ -1.98
Ccdc88aQ5SNZ0 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm22806-201ENSMUST00000082738 136 ntBASIC2.69□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm26064-201ENSMUST00000083381 109 ntBASIC2.69□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Ccdc88aQ5SNZ0 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Ccdc88aQ5SNZ0 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm25094-201ENSMUST00000103992 131 ntBASIC2.69□□□□□ -1.98
Ccdc88aQ5SNZ0 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC2.69□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm37579-201ENSMUST00000194291 142 ntBASIC2.69□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm37732-201ENSMUST00000194377 316 ntBASIC2.69□□□□□ -1.98
Ccdc88aQ5SNZ0 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Ccdc88aQ5SNZ0 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC2.69□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm42818-201ENSMUST00000198869 987 ntBASIC2.69□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm45395-201ENSMUST00000209891 559 ntBASIC2.69□□□□□ -1.98
Ccdc88aQ5SNZ0 AC153899.1-201ENSMUST00000214092 1117 ntBASIC2.69□□□□□ -1.98
Ccdc88aQ5SNZ0 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC2.69□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm18557-201ENSMUST00000218710 433 ntBASIC2.69□□□□□ -1.98
Ccdc88aQ5SNZ0 AC160970.1-201ENSMUST00000219311 475 ntBASIC2.69□□□□□ -1.98
Ccdc88aQ5SNZ0 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm14794-201ENSMUST00000118181 192 ntBASIC2.68□□□□□ -1.98
Ccdc88aQ5SNZ0 Trav20-201ENSMUST00000142754 347 ntBASIC2.68□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm23958-201ENSMUST00000157207 105 ntBASIC2.68□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm22947-201ENSMUST00000158559 91 ntBASIC2.68□□□□□ -1.98
Ccdc88aQ5SNZ0 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Ccdc88aQ5SNZ0 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC2.68□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm27718-201ENSMUST00000183721 86 ntBASIC2.68□□□□□ -1.98
Ccdc88aQ5SNZ0 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm9251-201ENSMUST00000197202 628 ntBASIC2.68□□□□□ -1.98
Ccdc88aQ5SNZ0 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC2.68□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm18043-201ENSMUST00000216741 739 ntBASIC2.68□□□□□ -1.98
Ccdc88aQ5SNZ0 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.68□□□□□ -1.98
Ccdc88aQ5SNZ0 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Ccdc88aQ5SNZ0 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC2.68□□□□□ -1.98
Ccdc88aQ5SNZ0 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Ccdc88aQ5SNZ0 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm25647-201ENSMUST00000101832 78 ntBASIC2.67□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm25823-201ENSMUST00000101995 78 ntBASIC2.67□□□□□ -1.98
Ccdc88aQ5SNZ0 Mir758-201ENSMUST00000103260 81 ntBASIC2.67□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm22019-201ENSMUST00000104359 96 ntBASIC2.67□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm15162-201ENSMUST00000119325 283 ntBASIC2.67□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm14905-201ENSMUST00000122351 639 ntBASIC2.67□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm23600-201ENSMUST00000157260 71 ntBASIC2.67□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm22556-201ENSMUST00000157803 100 ntBASIC2.67□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm25460-201ENSMUST00000157954 127 ntBASIC2.67□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm25902-201ENSMUST00000158493 318 ntBASIC2.67□□□□□ -1.98
Ccdc88aQ5SNZ0 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC2.67□□□□□ -1.98
Ccdc88aQ5SNZ0 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC2.67□□□□□ -1.98
Ccdc88aQ5SNZ0 Mir1264-201ENSMUST00000175381 86 ntBASIC2.67□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm24220-201ENSMUST00000177753 79 ntBASIC2.67□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm25988-201ENSMUST00000177759 79 ntBASIC2.67□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm23471-201ENSMUST00000177886 79 ntBASIC2.67□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm26488-201ENSMUST00000178225 79 ntBASIC2.67□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm23449-201ENSMUST00000179208 79 ntBASIC2.67□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm25221-201ENSMUST00000180051 79 ntBASIC2.67□□□□□ -1.98
Ccdc88aQ5SNZ0 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm37866-201ENSMUST00000191950 696 ntBASIC2.67□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm29815-201ENSMUST00000202418 178 ntBASIC2.67□□□□□ -1.98
Ccdc88aQ5SNZ0 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.67□□□□□ -1.98
Ccdc88aQ5SNZ0 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC2.67□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm25910-201ENSMUST00000157620 140 ntBASIC2.67□□□□□ -1.98
Ccdc88aQ5SNZ0 Gm23043-201ENSMUST00000157890 109 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 107.5 ms