Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 AC113031.2-201ENSMUST00000226132 579 ntBASIC1.5□□□□□ -2.17
Trav3-1Q5R1I8 AC166574.7-201ENSMUST00000228502 704 ntBASIC1.5□□□□□ -2.17
Trav3-1Q5R1I8 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Trav3-1Q5R1I8 Mir301-201ENSMUST00000083655 86 ntBASIC1.5□□□□□ -2.17
Trav3-1Q5R1I8 Gm26176-201ENSMUST00000083795 105 ntBASIC1.5□□□□□ -2.17
Trav3-1Q5R1I8 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Trav3-1Q5R1I8 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Trav3-1Q5R1I8 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
Trav3-1Q5R1I8 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Trav3-1Q5R1I8 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Trav3-1Q5R1I8 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Trav3-1Q5R1I8 Gm25097-201ENSMUST00000104042 145 ntBASIC1.49□□□□□ -2.17
Trav3-1Q5R1I8 Gm15025-201ENSMUST00000118434 418 ntBASIC1.49□□□□□ -2.17
Trav3-1Q5R1I8 Gm8217-201ENSMUST00000119136 465 ntBASIC1.49□□□□□ -2.17
Trav3-1Q5R1I8 Gm15281-201ENSMUST00000125181 351 ntBASIC1.49□□□□□ -2.17
Trav3-1Q5R1I8 Mup-ps12-201ENSMUST00000126217 549 ntBASIC1.49□□□□□ -2.17
Trav3-1Q5R1I8 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC1.49□□□□□ -2.17
Trav3-1Q5R1I8 Gm22560-201ENSMUST00000157332 120 ntBASIC1.49□□□□□ -2.17
Trav3-1Q5R1I8 Gm24730-201ENSMUST00000158228 117 ntBASIC1.49□□□□□ -2.17
Trav3-1Q5R1I8 Gm24212-201ENSMUST00000158258 132 ntBASIC1.49□□□□□ -2.17
Trav3-1Q5R1I8 Gm5473-201ENSMUST00000179326 642 ntBASIC1.49□□□□□ -2.17
Trav3-1Q5R1I8 Mir6379-201ENSMUST00000183392 115 ntBASIC1.49□□□□□ -2.17
Trav3-1Q5R1I8 Gm29740-201ENSMUST00000193182 655 ntBASIC1.49□□□□□ -2.17
Trav3-1Q5R1I8 Gm43193-201ENSMUST00000197732 441 ntBASIC1.49□□□□□ -2.17
Trav3-1Q5R1I8 Ighv1-68-201ENSMUST00000198789 294 ntBASIC1.49□□□□□ -2.17
Trav3-1Q5R1I8 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC1.49□□□□□ -2.17
Trav3-1Q5R1I8 Gm31532-201ENSMUST00000203555 767 ntBASIC1.49□□□□□ -2.17
Trav3-1Q5R1I8 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.49□□□□□ -2.17
Trav3-1Q5R1I8 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC1.49□□□□□ -2.17
Trav3-1Q5R1I8 Gnrh1-202ENSMUST00000223929 428 ntBASIC1.49□□□□□ -2.17
Trav3-1Q5R1I8 AC121898.1-201ENSMUST00000227599 288 ntBASIC1.49□□□□□ -2.17
Trav3-1Q5R1I8 Gm9845-201ENSMUST00000056409 598 ntBASIC1.49□□□□□ -2.17
Trav3-1Q5R1I8 Gm22043-201ENSMUST00000082993 158 ntBASIC1.49□□□□□ -2.17
Trav3-1Q5R1I8 Snord22-201ENSMUST00000083153 126 ntBASIC1.49□□□□□ -2.17
Trav3-1Q5R1I8 Gm14910-201ENSMUST00000121037 1805 ntBASIC1.49□□□□□ -2.17
Trav3-1Q5R1I8 Gm15303-201ENSMUST00000118676 2624 ntBASIC1.49□□□□□ -2.17
Trav3-1Q5R1I8 Gm18300-201ENSMUST00000192792 1406 ntBASIC1.49□□□□□ -2.17
Trav3-1Q5R1I8 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
Trav3-1Q5R1I8 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.48□□□□□ -2.17
Trav3-1Q5R1I8 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
Trav3-1Q5R1I8 Gm16089-201ENSMUST00000117679 336 ntBASIC1.48□□□□□ -2.17
Trav3-1Q5R1I8 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC1.48□□□□□ -2.17
Trav3-1Q5R1I8 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC1.48□□□□□ -2.17
Trav3-1Q5R1I8 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC1.48□□□□□ -2.17
Trav3-1Q5R1I8 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC1.48□□□□□ -2.17
Trav3-1Q5R1I8 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC1.48□□□□□ -2.17
Trav3-1Q5R1I8 Gm9892-201ENSMUST00000182415 992 ntBASIC1.48□□□□□ -2.17
Trav3-1Q5R1I8 Gm3852-201ENSMUST00000182781 264 ntBASIC1.48□□□□□ -2.17
Trav3-1Q5R1I8 Gm37979-201ENSMUST00000193065 712 ntBASIC1.48□□□□□ -2.17
Trav3-1Q5R1I8 Trbv18-201ENSMUST00000194256 294 ntBASIC1.48□□□□□ -2.17
Trav3-1Q5R1I8 Gm8041-201ENSMUST00000199755 616 ntBASIC1.48□□□□□ -2.17
Trav3-1Q5R1I8 Gm43084-201ENSMUST00000200696 947 ntBASIC1.48□□□□□ -2.17
Trav3-1Q5R1I8 Gm44184-201ENSMUST00000204290 132 ntBASIC1.48□□□□□ -2.17
Trav3-1Q5R1I8 Gm45146-201ENSMUST00000207108 221 ntBASIC1.48□□□□□ -2.17
Trav3-1Q5R1I8 Gm7624-201ENSMUST00000209702 435 ntBASIC1.48□□□□□ -2.17
Trav3-1Q5R1I8 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Trav3-1Q5R1I8 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC1.48□□□□□ -2.17
Trav3-1Q5R1I8 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Trav3-1Q5R1I8 Gm4017-201ENSMUST00000084813 338 ntBASIC1.48□□□□□ -2.17
Trav3-1Q5R1I8 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Trav3-1Q5R1I8 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
Trav3-1Q5R1I8 Gm14429-201ENSMUST00000121881 2024 ntBASIC1.47□□□□□ -2.17
Trav3-1Q5R1I8 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Trav3-1Q5R1I8 AC125374.3-201ENSMUST00000214983 2810 ntBASIC1.47□□□□□ -2.17
Trav3-1Q5R1I8 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC1.47□□□□□ -2.17
Trav3-1Q5R1I8 Gm7164-201ENSMUST00000117503 450 ntBASIC1.47□□□□□ -2.17
Trav3-1Q5R1I8 Gm22956-201ENSMUST00000122520 80 ntBASIC1.47□□□□□ -2.17
Trav3-1Q5R1I8 DQ267100-201ENSMUST00000122600 72 ntBASIC1.47□□□□□ -2.17
Trav3-1Q5R1I8 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC1.47□□□□□ -2.17
Trav3-1Q5R1I8 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Trav3-1Q5R1I8 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Trav3-1Q5R1I8 Gm14651-201ENSMUST00000147192 442 ntBASIC1.47□□□□□ -2.17
Trav3-1Q5R1I8 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC1.47□□□□□ -2.17
Trav3-1Q5R1I8 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC1.47□□□□□ -2.17
Trav3-1Q5R1I8 Gm22603-201ENSMUST00000157603 96 ntBASIC1.47□□□□□ -2.17
Trav3-1Q5R1I8 Gm25460-201ENSMUST00000157954 127 ntBASIC1.47□□□□□ -2.17
Trav3-1Q5R1I8 Gm22211-201ENSMUST00000158097 156 ntBASIC1.47□□□□□ -2.17
Trav3-1Q5R1I8 Gm25658-201ENSMUST00000158472 128 ntBASIC1.47□□□□□ -2.17
Trav3-1Q5R1I8 Gm2930-201ENSMUST00000170403 474 ntBASIC1.47□□□□□ -2.17
Trav3-1Q5R1I8 Mir5103-201ENSMUST00000175111 79 ntBASIC1.47□□□□□ -2.17
Trav3-1Q5R1I8 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Trav3-1Q5R1I8 Mir6383-201ENSMUST00000184545 116 ntBASIC1.47□□□□□ -2.17
Trav3-1Q5R1I8 Gm27753-201ENSMUST00000184742 203 ntBASIC1.47□□□□□ -2.17
Trav3-1Q5R1I8 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Trav3-1Q5R1I8 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
Trav3-1Q5R1I8 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
Trav3-1Q5R1I8 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC1.47□□□□□ -2.17
Trav3-1Q5R1I8 Gm20811-201ENSMUST00000190500 553 ntBASIC1.47□□□□□ -2.17
Trav3-1Q5R1I8 Gm43355-201ENSMUST00000196541 346 ntBASIC1.47□□□□□ -2.17
Trav3-1Q5R1I8 Gm43308-201ENSMUST00000197236 373 ntBASIC1.47□□□□□ -2.17
Trav3-1Q5R1I8 Gm44952-201ENSMUST00000204443 433 ntBASIC1.47□□□□□ -2.17
Trav3-1Q5R1I8 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC1.47□□□□□ -2.17
Trav3-1Q5R1I8 Gm45080-201ENSMUST00000206648 283 ntBASIC1.47□□□□□ -2.17
Trav3-1Q5R1I8 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC1.47□□□□□ -2.17
Trav3-1Q5R1I8 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC1.47□□□□□ -2.17
Trav3-1Q5R1I8 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC1.47□□□□□ -2.17
Trav3-1Q5R1I8 Gm34779-201ENSMUST00000210036 263 ntBASIC1.47□□□□□ -2.17
Trav3-1Q5R1I8 Gm7639-201ENSMUST00000212608 484 ntBASIC1.47□□□□□ -2.17
Trav3-1Q5R1I8 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Trav3-1Q5R1I8 AC159380.1-201ENSMUST00000218096 121 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 99.8 ms