Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 AC154511.1-201ENSMUST00000222578 1587 ntBASIC2.16□□□□□ -2.06
Trav5d-4Q5R1F6 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Trav5d-4Q5R1F6 Gm25647-201ENSMUST00000101832 78 ntBASIC2.16□□□□□ -2.06
Trav5d-4Q5R1F6 Gm25823-201ENSMUST00000101995 78 ntBASIC2.16□□□□□ -2.06
Trav5d-4Q5R1F6 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.16□□□□□ -2.06
Trav5d-4Q5R1F6 Gm12876-201ENSMUST00000120975 408 ntBASIC2.16□□□□□ -2.06
Trav5d-4Q5R1F6 Gm15466-201ENSMUST00000122299 333 ntBASIC2.16□□□□□ -2.06
Trav5d-4Q5R1F6 Gm17065-201ENSMUST00000165245 239 ntBASIC2.16□□□□□ -2.06
Trav5d-4Q5R1F6 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Trav5d-4Q5R1F6 Gm20450-201ENSMUST00000173652 147 ntBASIC2.16□□□□□ -2.06
Trav5d-4Q5R1F6 Gm24220-201ENSMUST00000177753 79 ntBASIC2.16□□□□□ -2.06
Trav5d-4Q5R1F6 Gm25988-201ENSMUST00000177759 79 ntBASIC2.16□□□□□ -2.06
Trav5d-4Q5R1F6 Gm23471-201ENSMUST00000177886 79 ntBASIC2.16□□□□□ -2.06
Trav5d-4Q5R1F6 Gm26488-201ENSMUST00000178225 79 ntBASIC2.16□□□□□ -2.06
Trav5d-4Q5R1F6 Gm23449-201ENSMUST00000179208 79 ntBASIC2.16□□□□□ -2.06
Trav5d-4Q5R1F6 Gm25221-201ENSMUST00000180051 79 ntBASIC2.16□□□□□ -2.06
Trav5d-4Q5R1F6 Gm19200-201ENSMUST00000182579 1001 ntBASIC2.16□□□□□ -2.06
Trav5d-4Q5R1F6 Mir7k-201ENSMUST00000184115 110 ntBASIC2.16□□□□□ -2.06
Trav5d-4Q5R1F6 Gm27505-201ENSMUST00000185071 110 ntBASIC2.16□□□□□ -2.06
Trav5d-4Q5R1F6 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Trav5d-4Q5R1F6 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC2.16□□□□□ -2.06
Trav5d-4Q5R1F6 Gm44393-201ENSMUST00000197418 138 ntBASIC2.16□□□□□ -2.06
Trav5d-4Q5R1F6 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC2.16□□□□□ -2.06
Trav5d-4Q5R1F6 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC2.16□□□□□ -2.06
Trav5d-4Q5R1F6 Gm8209-201ENSMUST00000206386 553 ntBASIC2.16□□□□□ -2.06
Trav5d-4Q5R1F6 Gm45427-201ENSMUST00000209572 1253 ntBASIC2.16□□□□□ -2.06
Trav5d-4Q5R1F6 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC2.16□□□□□ -2.06
Trav5d-4Q5R1F6 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.16□□□□□ -2.06
Trav5d-4Q5R1F6 Zmym2-202ENSMUST00000223669 1281 ntBASIC2.16□□□□□ -2.06
Trav5d-4Q5R1F6 CT030135.1-201ENSMUST00000223760 570 ntBASIC2.16□□□□□ -2.06
Trav5d-4Q5R1F6 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.16□□□□□ -2.06
Trav5d-4Q5R1F6 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Trav5d-4Q5R1F6 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trav5d-4Q5R1F6 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trav5d-4Q5R1F6 Gm25199-201ENSMUST00000083095 104 ntBASIC2.16□□□□□ -2.06
Trav5d-4Q5R1F6 n-R5s50-201ENSMUST00000083168 111 ntBASIC2.16□□□□□ -2.06
Trav5d-4Q5R1F6 Gm14429-201ENSMUST00000121881 2024 ntBASIC2.16□□□□□ -2.06
Trav5d-4Q5R1F6 Gm42967-201ENSMUST00000198647 2312 ntBASIC2.16□□□□□ -2.06
Trav5d-4Q5R1F6 Gm43032-201ENSMUST00000197967 3123 ntBASIC2.15□□□□□ -2.06
Trav5d-4Q5R1F6 Gm14910-201ENSMUST00000121037 1805 ntBASIC2.15□□□□□ -2.06
Trav5d-4Q5R1F6 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.15□□□□□ -2.07
Trav5d-4Q5R1F6 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Trav5d-4Q5R1F6 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC2.15□□□□□ -2.07
Trav5d-4Q5R1F6 Gm15094-201ENSMUST00000118394 1131 ntBASIC2.15□□□□□ -2.07
Trav5d-4Q5R1F6 Gm11429-201ENSMUST00000119089 144 ntBASIC2.15□□□□□ -2.07
Trav5d-4Q5R1F6 Gm15103-201ENSMUST00000119893 871 ntBASIC2.15□□□□□ -2.07
Trav5d-4Q5R1F6 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC2.15□□□□□ -2.07
Trav5d-4Q5R1F6 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.07
Trav5d-4Q5R1F6 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC2.15□□□□□ -2.07
Trav5d-4Q5R1F6 Gm24958-201ENSMUST00000158009 97 ntBASIC2.15□□□□□ -2.07
Trav5d-4Q5R1F6 Gm22538-201ENSMUST00000158169 299 ntBASIC2.15□□□□□ -2.07
Trav5d-4Q5R1F6 Gm22416-201ENSMUST00000158590 88 ntBASIC2.15□□□□□ -2.07
Trav5d-4Q5R1F6 Gm25119-201ENSMUST00000158815 88 ntBASIC2.15□□□□□ -2.07
Trav5d-4Q5R1F6 Gm16236-201ENSMUST00000159588 379 ntBASIC2.15□□□□□ -2.07
Trav5d-4Q5R1F6 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC2.15□□□□□ -2.07
Trav5d-4Q5R1F6 Gm20718-201ENSMUST00000176058 259 ntBASIC2.15□□□□□ -2.07
Trav5d-4Q5R1F6 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Trav5d-4Q5R1F6 Gm27379-201ENSMUST00000183730 123 ntBASIC2.15□□□□□ -2.07
Trav5d-4Q5R1F6 Gm27582-201ENSMUST00000184084 126 ntBASIC2.15□□□□□ -2.07
Trav5d-4Q5R1F6 Gm8676-201ENSMUST00000184206 637 ntBASIC2.15□□□□□ -2.07
Trav5d-4Q5R1F6 Gm28744-201ENSMUST00000189939 340 ntBASIC2.15□□□□□ -2.07
Trav5d-4Q5R1F6 Gm37866-201ENSMUST00000191950 696 ntBASIC2.15□□□□□ -2.07
Trav5d-4Q5R1F6 Gm29747-201ENSMUST00000194764 585 ntBASIC2.15□□□□□ -2.07
Trav5d-4Q5R1F6 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Trav5d-4Q5R1F6 Gm43264-201ENSMUST00000202284 325 ntBASIC2.15□□□□□ -2.07
Trav5d-4Q5R1F6 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.15□□□□□ -2.07
Trav5d-4Q5R1F6 Gm45048-201ENSMUST00000207058 429 ntBASIC2.15□□□□□ -2.07
Trav5d-4Q5R1F6 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Trav5d-4Q5R1F6 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.15□□□□□ -2.07
Trav5d-4Q5R1F6 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC2.15□□□□□ -2.07
Trav5d-4Q5R1F6 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Trav5d-4Q5R1F6 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
Trav5d-4Q5R1F6 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Trav5d-4Q5R1F6 Gm24670-201ENSMUST00000104154 132 ntBASIC2.14□□□□□ -2.07
Trav5d-4Q5R1F6 Gm24280-201ENSMUST00000104237 134 ntBASIC2.14□□□□□ -2.07
Trav5d-4Q5R1F6 Snora36b-201ENSMUST00000104383 132 ntBASIC2.14□□□□□ -2.07
Trav5d-4Q5R1F6 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC2.14□□□□□ -2.07
Trav5d-4Q5R1F6 Gm26247-201ENSMUST00000116702 91 ntBASIC2.14□□□□□ -2.07
Trav5d-4Q5R1F6 Mir466k-201ENSMUST00000116774 122 ntBASIC2.14□□□□□ -2.07
Trav5d-4Q5R1F6 Gm14469-201ENSMUST00000118363 202 ntBASIC2.14□□□□□ -2.07
Trav5d-4Q5R1F6 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Trav5d-4Q5R1F6 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC2.14□□□□□ -2.07
Trav5d-4Q5R1F6 Gm24627-201ENSMUST00000122764 138 ntBASIC2.14□□□□□ -2.07
Trav5d-4Q5R1F6 Mup-ps12-201ENSMUST00000126217 549 ntBASIC2.14□□□□□ -2.07
Trav5d-4Q5R1F6 Gm1989-201ENSMUST00000126244 636 ntBASIC2.14□□□□□ -2.07
Trav5d-4Q5R1F6 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Trav5d-4Q5R1F6 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC2.14□□□□□ -2.07
Trav5d-4Q5R1F6 Gm24060-201ENSMUST00000157494 95 ntBASIC2.14□□□□□ -2.07
Trav5d-4Q5R1F6 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
Trav5d-4Q5R1F6 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC2.14□□□□□ -2.07
Trav5d-4Q5R1F6 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Trav5d-4Q5R1F6 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Trav5d-4Q5R1F6 Gm27608-201ENSMUST00000184822 162 ntBASIC2.14□□□□□ -2.07
Trav5d-4Q5R1F6 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC2.14□□□□□ -2.07
Trav5d-4Q5R1F6 Ighv1-28-201ENSMUST00000192987 351 ntBASIC2.14□□□□□ -2.07
Trav5d-4Q5R1F6 Gm18692-201ENSMUST00000193047 511 ntBASIC2.14□□□□□ -2.07
Trav5d-4Q5R1F6 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC2.14□□□□□ -2.07
Trav5d-4Q5R1F6 Gm32222-201ENSMUST00000203296 298 ntBASIC2.14□□□□□ -2.07
Trav5d-4Q5R1F6 Gm43967-201ENSMUST00000203787 301 ntBASIC2.14□□□□□ -2.07
Trav5d-4Q5R1F6 Gm45452-201ENSMUST00000210905 177 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms