Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Gm18306-201ENSMUST00000207338 569 ntBASIC4.84□□□□□ -1.63
Rnf43Q5NCP0 Gm45252-201ENSMUST00000211579 397 ntBASIC4.84□□□□□ -1.63
Rnf43Q5NCP0 Gm45879-201ENSMUST00000212521 392 ntBASIC4.84□□□□□ -1.63
Rnf43Q5NCP0 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC4.84□□□□□ -1.63
Rnf43Q5NCP0 Gm23099-201ENSMUST00000083454 139 ntBASIC4.84□□□□□ -1.63
Rnf43Q5NCP0 Gm26164-201ENSMUST00000083793 104 ntBASIC4.84□□□□□ -1.63
Rnf43Q5NCP0 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Rnf43Q5NCP0 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Rnf43Q5NCP0 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Rnf43Q5NCP0 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Rnf43Q5NCP0 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Rnf43Q5NCP0 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Rnf43Q5NCP0 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Rnf43Q5NCP0 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Rnf43Q5NCP0 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
Rnf43Q5NCP0 AC121598.3-201ENSMUST00000227179 1643 ntBASIC4.83□□□□□ -1.64
Rnf43Q5NCP0 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Rnf43Q5NCP0 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Rnf43Q5NCP0 Mir879-201ENSMUST00000104703 76 ntBASIC4.83□□□□□ -1.64
Rnf43Q5NCP0 Gm11576-201ENSMUST00000117433 417 ntBASIC4.83□□□□□ -1.64
Rnf43Q5NCP0 Defa-ps15-201ENSMUST00000118178 477 ntBASIC4.83□□□□□ -1.64
Rnf43Q5NCP0 Gm12820-201ENSMUST00000119233 342 ntBASIC4.83□□□□□ -1.64
Rnf43Q5NCP0 Gm25106-201ENSMUST00000122672 134 ntBASIC4.83□□□□□ -1.64
Rnf43Q5NCP0 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Rnf43Q5NCP0 Gm26041-201ENSMUST00000158148 108 ntBASIC4.83□□□□□ -1.64
Rnf43Q5NCP0 Mir6414-201ENSMUST00000183685 82 ntBASIC4.83□□□□□ -1.64
Rnf43Q5NCP0 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC4.83□□□□□ -1.64
Rnf43Q5NCP0 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC4.83□□□□□ -1.64
Rnf43Q5NCP0 Gm29665-201ENSMUST00000191457 528 ntBASIC4.83□□□□□ -1.64
Rnf43Q5NCP0 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC4.83□□□□□ -1.64
Rnf43Q5NCP0 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC4.83□□□□□ -1.64
Rnf43Q5NCP0 Gm44859-201ENSMUST00000207831 94 ntBASIC4.83□□□□□ -1.64
Rnf43Q5NCP0 Gm39197-201ENSMUST00000212069 457 ntBASIC4.83□□□□□ -1.64
Rnf43Q5NCP0 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC4.83□□□□□ -1.64
Rnf43Q5NCP0 Gm45704-201ENSMUST00000212582 403 ntBASIC4.83□□□□□ -1.64
Rnf43Q5NCP0 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Rnf43Q5NCP0 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC4.83□□□□□ -1.64
Rnf43Q5NCP0 Gm23928-201ENSMUST00000082469 145 ntBASIC4.83□□□□□ -1.64
Rnf43Q5NCP0 Gm24045-201ENSMUST00000083113 98 ntBASIC4.83□□□□□ -1.64
Rnf43Q5NCP0 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Rnf43Q5NCP0 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
Rnf43Q5NCP0 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC4.83□□□□□ -1.64
Rnf43Q5NCP0 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Rnf43Q5NCP0 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC4.83□□□□□ -1.64
Rnf43Q5NCP0 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC4.83□□□□□ -1.64
Rnf43Q5NCP0 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
Rnf43Q5NCP0 Gm37628-201ENSMUST00000194644 5440 ntBASIC4.82□□□□□ -1.64
Rnf43Q5NCP0 Gm24951-201ENSMUST00000102182 109 ntBASIC4.82□□□□□ -1.64
Rnf43Q5NCP0 Gm13132-201ENSMUST00000121194 472 ntBASIC4.82□□□□□ -1.64
Rnf43Q5NCP0 Gm13725-201ENSMUST00000122139 207 ntBASIC4.82□□□□□ -1.64
Rnf43Q5NCP0 Gm24371-201ENSMUST00000122662 267 ntBASIC4.82□□□□□ -1.64
Rnf43Q5NCP0 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Rnf43Q5NCP0 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Rnf43Q5NCP0 Gm23318-201ENSMUST00000158000 108 ntBASIC4.82□□□□□ -1.64
Rnf43Q5NCP0 Gm22211-201ENSMUST00000158097 156 ntBASIC4.82□□□□□ -1.64
Rnf43Q5NCP0 Gm24577-201ENSMUST00000158580 63 ntBASIC4.82□□□□□ -1.64
Rnf43Q5NCP0 Gm26400-201ENSMUST00000175012 85 ntBASIC4.82□□□□□ -1.64
Rnf43Q5NCP0 Gm26928-201ENSMUST00000182674 572 ntBASIC4.82□□□□□ -1.64
Rnf43Q5NCP0 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC4.82□□□□□ -1.64
Rnf43Q5NCP0 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC4.82□□□□□ -1.64
Rnf43Q5NCP0 Gm37338-201ENSMUST00000191986 127 ntBASIC4.82□□□□□ -1.64
Rnf43Q5NCP0 Gm44481-201ENSMUST00000197288 84 ntBASIC4.82□□□□□ -1.64
Rnf43Q5NCP0 Gm44339-201ENSMUST00000200598 84 ntBASIC4.82□□□□□ -1.64
Rnf43Q5NCP0 Gm45200-201ENSMUST00000207434 919 ntBASIC4.82□□□□□ -1.64
Rnf43Q5NCP0 Gm45119-201ENSMUST00000207612 199 ntBASIC4.82□□□□□ -1.64
Rnf43Q5NCP0 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC4.82□□□□□ -1.64
Rnf43Q5NCP0 Snord22-201ENSMUST00000083153 126 ntBASIC4.82□□□□□ -1.64
Rnf43Q5NCP0 Gm22577-201ENSMUST00000083731 109 ntBASIC4.82□□□□□ -1.64
Rnf43Q5NCP0 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Rnf43Q5NCP0 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Rnf43Q5NCP0 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Rnf43Q5NCP0 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Rnf43Q5NCP0 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Rnf43Q5NCP0 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
Rnf43Q5NCP0 Gm5248-201ENSMUST00000186108 4046 ntBASIC4.81□□□□□ -1.64
Rnf43Q5NCP0 Gm45853-201ENSMUST00000212310 3171 ntBASIC4.81□□□□□ -1.64
Rnf43Q5NCP0 Mir19b-1-201ENSMUST00000102301 87 ntBASIC4.81□□□□□ -1.64
Rnf43Q5NCP0 Gm23577-201ENSMUST00000103950 110 ntBASIC4.81□□□□□ -1.64
Rnf43Q5NCP0 Gm23273-201ENSMUST00000104058 135 ntBASIC4.81□□□□□ -1.64
Rnf43Q5NCP0 Gm11971-201ENSMUST00000117715 288 ntBASIC4.81□□□□□ -1.64
Rnf43Q5NCP0 n-R5s80-201ENSMUST00000122596 111 ntBASIC4.81□□□□□ -1.64
Rnf43Q5NCP0 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC4.81□□□□□ -1.64
Rnf43Q5NCP0 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC4.81□□□□□ -1.64
Rnf43Q5NCP0 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC4.81□□□□□ -1.64
Rnf43Q5NCP0 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Rnf43Q5NCP0 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC4.81□□□□□ -1.64
Rnf43Q5NCP0 Gm24774-201ENSMUST00000157384 134 ntBASIC4.81□□□□□ -1.64
Rnf43Q5NCP0 Gm23829-201ENSMUST00000157392 270 ntBASIC4.81□□□□□ -1.64
Rnf43Q5NCP0 Gm24402-201ENSMUST00000157873 91 ntBASIC4.81□□□□□ -1.64
Rnf43Q5NCP0 Gm24537-201ENSMUST00000157950 102 ntBASIC4.81□□□□□ -1.64
Rnf43Q5NCP0 Gm24876-201ENSMUST00000158780 92 ntBASIC4.81□□□□□ -1.64
Rnf43Q5NCP0 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Rnf43Q5NCP0 Ear-ps4-201ENSMUST00000166834 450 ntBASIC4.81□□□□□ -1.64
Rnf43Q5NCP0 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Rnf43Q5NCP0 Gm23966-201ENSMUST00000179823 107 ntBASIC4.81□□□□□ -1.64
Rnf43Q5NCP0 Gm27883-201ENSMUST00000183941 102 ntBASIC4.81□□□□□ -1.64
Rnf43Q5NCP0 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC4.81□□□□□ -1.64
Rnf43Q5NCP0 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC4.81□□□□□ -1.64
Rnf43Q5NCP0 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Rnf43Q5NCP0 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC4.81□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 102.4 ms