Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Trim40Q3UWA4 Gm38211-201ENSMUST00000192814 7217 ntBASIC3.06□□□□□ -1.92
Trim40Q3UWA4 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.06□□□□□ -1.92
Trim40Q3UWA4 Gm12492-201ENSMUST00000117665 564 ntBASIC3.06□□□□□ -1.92
Trim40Q3UWA4 Gm12891-201ENSMUST00000119358 240 ntBASIC3.06□□□□□ -1.92
Trim40Q3UWA4 Gm11829-201ENSMUST00000121003 282 ntBASIC3.06□□□□□ -1.92
Trim40Q3UWA4 Gm12096-201ENSMUST00000121149 829 ntBASIC3.06□□□□□ -1.92
Trim40Q3UWA4 Gm12095-201ENSMUST00000121962 816 ntBASIC3.06□□□□□ -1.92
Trim40Q3UWA4 Gm22026-201ENSMUST00000122735 281 ntBASIC3.06□□□□□ -1.92
Trim40Q3UWA4 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC3.06□□□□□ -1.92
Trim40Q3UWA4 Gm5709-201ENSMUST00000177879 1165 ntBASIC3.06□□□□□ -1.92
Trim40Q3UWA4 Gm26960-201ENSMUST00000182263 412 ntBASIC3.06□□□□□ -1.92
Trim40Q3UWA4 Gm28785-201ENSMUST00000187478 379 ntBASIC3.06□□□□□ -1.92
Trim40Q3UWA4 Gm5551-201ENSMUST00000199720 690 ntBASIC3.06□□□□□ -1.92
Trim40Q3UWA4 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC3.06□□□□□ -1.92
Trim40Q3UWA4 Gm44990-201ENSMUST00000203922 217 ntBASIC3.06□□□□□ -1.92
Trim40Q3UWA4 Gm39147-201ENSMUST00000211376 465 ntBASIC3.06□□□□□ -1.92
Trim40Q3UWA4 Gm5362-201ENSMUST00000211968 3085 ntBASIC3.06□□□□□ -1.92
Trim40Q3UWA4 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Trim40Q3UWA4 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC3.06□□□□□ -1.92
Trim40Q3UWA4 AC152979.1-201ENSMUST00000218214 289 ntBASIC3.06□□□□□ -1.92
Trim40Q3UWA4 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC3.06□□□□□ -1.92
Trim40Q3UWA4 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC3.06□□□□□ -1.92
Trim40Q3UWA4 AC132315.1-201ENSMUST00000221771 390 ntBASIC3.06□□□□□ -1.92
Trim40Q3UWA4 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC3.06□□□□□ -1.92
Trim40Q3UWA4 AC140344.1-201ENSMUST00000223384 387 ntBASIC3.06□□□□□ -1.92
Trim40Q3UWA4 Gm9309-201ENSMUST00000223537 546 ntBASIC3.06□□□□□ -1.92
Trim40Q3UWA4 AC140451.2-202ENSMUST00000226156 574 ntBASIC3.06□□□□□ -1.92
Trim40Q3UWA4 AC170810.3-201ENSMUST00000226177 374 ntBASIC3.06□□□□□ -1.92
Trim40Q3UWA4 AC108945.1-201ENSMUST00000226477 94 ntBASIC3.06□□□□□ -1.92
Trim40Q3UWA4 AC133176.1-201ENSMUST00000226668 219 ntBASIC3.06□□□□□ -1.92
Trim40Q3UWA4 AC166344.2-201ENSMUST00000226747 374 ntBASIC3.06□□□□□ -1.92
Trim40Q3UWA4 AC164883.9-201ENSMUST00000228042 399 ntBASIC3.06□□□□□ -1.92
Trim40Q3UWA4 Gm24610-201ENSMUST00000083270 109 ntBASIC3.06□□□□□ -1.92
Trim40Q3UWA4 Gm22970-201ENSMUST00000083304 186 ntBASIC3.06□□□□□ -1.92
Trim40Q3UWA4 Gm25630-201ENSMUST00000084000 162 ntBASIC3.06□□□□□ -1.92
Trim40Q3UWA4 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
Trim40Q3UWA4 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Trim40Q3UWA4 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Trim40Q3UWA4 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.06□□□□□ -1.92
Trim40Q3UWA4 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.06□□□□□ -1.92
Trim40Q3UWA4 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
Trim40Q3UWA4 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Trim40Q3UWA4 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Trim40Q3UWA4 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Trim40Q3UWA4 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.05□□□□□ -1.92
Trim40Q3UWA4 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.05□□□□□ -1.92
Trim40Q3UWA4 Gm7905-201ENSMUST00000119933 1386 ntBASIC3.05□□□□□ -1.92
Trim40Q3UWA4 Gm6221-201ENSMUST00000180064 1386 ntBASIC3.05□□□□□ -1.92
Trim40Q3UWA4 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Trim40Q3UWA4 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC3.05□□□□□ -1.92
Trim40Q3UWA4 Gm17132-201ENSMUST00000109542 1158 ntBASIC3.05□□□□□ -1.92
Trim40Q3UWA4 Gm9157-201ENSMUST00000117673 225 ntBASIC3.05□□□□□ -1.92
Trim40Q3UWA4 Gm15399-201ENSMUST00000118055 724 ntBASIC3.05□□□□□ -1.92
Trim40Q3UWA4 Gm14975-201ENSMUST00000118741 664 ntBASIC3.05□□□□□ -1.92
Trim40Q3UWA4 Gm15268-201ENSMUST00000118845 352 ntBASIC3.05□□□□□ -1.92
Trim40Q3UWA4 Gm11357-201ENSMUST00000119758 954 ntBASIC3.05□□□□□ -1.92
Trim40Q3UWA4 Gm13239-201ENSMUST00000119920 637 ntBASIC3.05□□□□□ -1.92
Trim40Q3UWA4 Gm15037-201ENSMUST00000120358 259 ntBASIC3.05□□□□□ -1.92
Trim40Q3UWA4 Gm15177-201ENSMUST00000120491 577 ntBASIC3.05□□□□□ -1.92
Trim40Q3UWA4 Gm14982-201ENSMUST00000121102 442 ntBASIC3.05□□□□□ -1.92
Trim40Q3UWA4 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Trim40Q3UWA4 Gm2020-201ENSMUST00000145242 579 ntBASIC3.05□□□□□ -1.92
Trim40Q3UWA4 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC3.05□□□□□ -1.92
Trim40Q3UWA4 Gm24910-201ENSMUST00000157289 272 ntBASIC3.05□□□□□ -1.92
Trim40Q3UWA4 Gm22840-201ENSMUST00000158444 136 ntBASIC3.05□□□□□ -1.92
Trim40Q3UWA4 Gm3111-201ENSMUST00000167426 490 ntBASIC3.05□□□□□ -1.92
Trim40Q3UWA4 Mir5136-201ENSMUST00000175573 76 ntBASIC3.05□□□□□ -1.92
Trim40Q3UWA4 Gm23568-201ENSMUST00000177960 92 ntBASIC3.05□□□□□ -1.92
Trim40Q3UWA4 Gm24829-201ENSMUST00000179245 92 ntBASIC3.05□□□□□ -1.92
Trim40Q3UWA4 Gm23816-201ENSMUST00000179617 132 ntBASIC3.05□□□□□ -1.92
Trim40Q3UWA4 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Trim40Q3UWA4 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Trim40Q3UWA4 Gm29550-201ENSMUST00000185543 285 ntBASIC3.05□□□□□ -1.92
Trim40Q3UWA4 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Trim40Q3UWA4 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC3.05□□□□□ -1.92
Trim40Q3UWA4 Gm18384-201ENSMUST00000195974 808 ntBASIC3.05□□□□□ -1.92
Trim40Q3UWA4 Gm42465-201ENSMUST00000197036 492 ntBASIC3.05□□□□□ -1.92
Trim40Q3UWA4 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC3.05□□□□□ -1.92
Trim40Q3UWA4 Gm45614-201ENSMUST00000209994 721 ntBASIC3.05□□□□□ -1.92
Trim40Q3UWA4 Gm45539-201ENSMUST00000210313 428 ntBASIC3.05□□□□□ -1.92
Trim40Q3UWA4 Gm18488-201ENSMUST00000215082 364 ntBASIC3.05□□□□□ -1.92
Trim40Q3UWA4 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC3.05□□□□□ -1.92
Trim40Q3UWA4 AC138667.2-201ENSMUST00000224880 598 ntBASIC3.05□□□□□ -1.92
Trim40Q3UWA4 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Trim40Q3UWA4 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC3.05□□□□□ -1.92
Trim40Q3UWA4 Gm24490-201ENSMUST00000083803 98 ntBASIC3.05□□□□□ -1.92
Trim40Q3UWA4 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Trim40Q3UWA4 AC162910.1-201ENSMUST00000221219 1723 ntBASIC3.05□□□□□ -1.92
Trim40Q3UWA4 Gm40020-201ENSMUST00000215677 1635 ntBASIC3.04□□□□□ -1.92
Trim40Q3UWA4 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.04□□□□□ -1.92
Trim40Q3UWA4 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trim40Q3UWA4 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Trim40Q3UWA4 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trim40Q3UWA4 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Trim40Q3UWA4 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trim40Q3UWA4 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC3.04□□□□□ -1.92
Trim40Q3UWA4 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Trim40Q3UWA4 Gm14811-201ENSMUST00000117070 117 ntBASIC3.04□□□□□ -1.92
Trim40Q3UWA4 Gm15282-201ENSMUST00000117707 300 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms