Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Upf3aQ3ULJ3 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Upf3aQ3ULJ3 Gm8569-201ENSMUST00000117630 647 ntBASIC2.98□□□□□ -1.93
Upf3aQ3ULJ3 Gm7123-201ENSMUST00000117647 213 ntBASIC2.98□□□□□ -1.93
Upf3aQ3ULJ3 Gm13678-201ENSMUST00000118926 340 ntBASIC2.98□□□□□ -1.93
Upf3aQ3ULJ3 Gm13717-201ENSMUST00000119868 365 ntBASIC2.98□□□□□ -1.93
Upf3aQ3ULJ3 Gm11456-201ENSMUST00000121070 256 ntBASIC2.98□□□□□ -1.93
Upf3aQ3ULJ3 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
Upf3aQ3ULJ3 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Upf3aQ3ULJ3 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC2.98□□□□□ -1.93
Upf3aQ3ULJ3 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC2.98□□□□□ -1.93
Upf3aQ3ULJ3 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC2.98□□□□□ -1.93
Upf3aQ3ULJ3 Gm28534-201ENSMUST00000187744 676 ntBASIC2.98□□□□□ -1.93
Upf3aQ3ULJ3 Trbv7-201ENSMUST00000193339 402 ntBASIC2.98□□□□□ -1.93
Upf3aQ3ULJ3 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.98□□□□□ -1.93
Upf3aQ3ULJ3 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Upf3aQ3ULJ3 Gm45316-201ENSMUST00000210128 162 ntBASIC2.98□□□□□ -1.93
Upf3aQ3ULJ3 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC2.98□□□□□ -1.93
Upf3aQ3ULJ3 Gm18015-201ENSMUST00000214879 316 ntBASIC2.98□□□□□ -1.93
Upf3aQ3ULJ3 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC2.98□□□□□ -1.93
Upf3aQ3ULJ3 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.98□□□□□ -1.93
Upf3aQ3ULJ3 Gm45965-201ENSMUST00000221192 1284 ntBASIC2.98□□□□□ -1.93
Upf3aQ3ULJ3 AC154426.1-201ENSMUST00000225614 1132 ntBASIC2.98□□□□□ -1.93
Upf3aQ3ULJ3 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Upf3aQ3ULJ3 Gm23104-201ENSMUST00000083722 104 ntBASIC2.98□□□□□ -1.93
Upf3aQ3ULJ3 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Upf3aQ3ULJ3 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Upf3aQ3ULJ3 Gm38382-201ENSMUST00000193790 2499 ntBASIC2.98□□□□□ -1.93
Upf3aQ3ULJ3 Gm44842-201ENSMUST00000209173 3372 ntBASIC2.98□□□□□ -1.93
Upf3aQ3ULJ3 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
Upf3aQ3ULJ3 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Upf3aQ3ULJ3 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Upf3aQ3ULJ3 Mir706-201ENSMUST00000102262 84 ntBASIC2.97□□□□□ -1.93
Upf3aQ3ULJ3 Mir466k-201ENSMUST00000116774 122 ntBASIC2.97□□□□□ -1.93
Upf3aQ3ULJ3 Gm12509-201ENSMUST00000118033 609 ntBASIC2.97□□□□□ -1.93
Upf3aQ3ULJ3 Gm4732-201ENSMUST00000118778 473 ntBASIC2.97□□□□□ -1.93
Upf3aQ3ULJ3 Gm12327-201ENSMUST00000121729 1168 ntBASIC2.97□□□□□ -1.93
Upf3aQ3ULJ3 Gm13676-201ENSMUST00000122185 591 ntBASIC2.97□□□□□ -1.93
Upf3aQ3ULJ3 Gm24443-201ENSMUST00000157242 132 ntBASIC2.97□□□□□ -1.93
Upf3aQ3ULJ3 Gm25981-201ENSMUST00000157921 295 ntBASIC2.97□□□□□ -1.93
Upf3aQ3ULJ3 Gm22500-201ENSMUST00000158982 99 ntBASIC2.97□□□□□ -1.93
Upf3aQ3ULJ3 Mir3076-201ENSMUST00000175415 60 ntBASIC2.97□□□□□ -1.93
Upf3aQ3ULJ3 Gm20660-201ENSMUST00000177515 289 ntBASIC2.97□□□□□ -1.93
Upf3aQ3ULJ3 Gm24754-201ENSMUST00000177997 107 ntBASIC2.97□□□□□ -1.93
Upf3aQ3ULJ3 Gm8649-201ENSMUST00000181799 233 ntBASIC2.97□□□□□ -1.93
Upf3aQ3ULJ3 Gm27163-201ENSMUST00000184767 409 ntBASIC2.97□□□□□ -1.93
Upf3aQ3ULJ3 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Upf3aQ3ULJ3 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC2.97□□□□□ -1.93
Upf3aQ3ULJ3 Gm37989-201ENSMUST00000195202 803 ntBASIC2.97□□□□□ -1.93
Upf3aQ3ULJ3 Gm35931-201ENSMUST00000203931 448 ntBASIC2.97□□□□□ -1.93
Upf3aQ3ULJ3 Gm45192-201ENSMUST00000206749 283 ntBASIC2.97□□□□□ -1.93
Upf3aQ3ULJ3 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC2.97□□□□□ -1.93
Upf3aQ3ULJ3 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC2.97□□□□□ -1.93
Upf3aQ3ULJ3 CT573422.1-201ENSMUST00000216655 405 ntBASIC2.97□□□□□ -1.93
Upf3aQ3ULJ3 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC2.97□□□□□ -1.93
Upf3aQ3ULJ3 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC2.97□□□□□ -1.93
Upf3aQ3ULJ3 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC2.97□□□□□ -1.93
Upf3aQ3ULJ3 Gm7422-201ENSMUST00000220115 640 ntBASIC2.97□□□□□ -1.93
Upf3aQ3ULJ3 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Upf3aQ3ULJ3 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Upf3aQ3ULJ3 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Upf3aQ3ULJ3 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC2.97□□□□□ -1.93
Upf3aQ3ULJ3 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Upf3aQ3ULJ3 Gm25560-201ENSMUST00000104606 176 ntBASIC2.96□□□□□ -1.94
Upf3aQ3ULJ3 Gm11367-201ENSMUST00000117802 120 ntBASIC2.96□□□□□ -1.94
Upf3aQ3ULJ3 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
Upf3aQ3ULJ3 Gm8880-201ENSMUST00000121800 454 ntBASIC2.96□□□□□ -1.94
Upf3aQ3ULJ3 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC2.96□□□□□ -1.94
Upf3aQ3ULJ3 Snord93-201ENSMUST00000175580 71 ntBASIC2.96□□□□□ -1.94
Upf3aQ3ULJ3 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC2.96□□□□□ -1.94
Upf3aQ3ULJ3 Gm21827-201ENSMUST00000178247 423 ntBASIC2.96□□□□□ -1.94
Upf3aQ3ULJ3 Gm25412-201ENSMUST00000180258 107 ntBASIC2.96□□□□□ -1.94
Upf3aQ3ULJ3 Mir7068-201ENSMUST00000183439 74 ntBASIC2.96□□□□□ -1.94
Upf3aQ3ULJ3 Mir7013-201ENSMUST00000183540 72 ntBASIC2.96□□□□□ -1.94
Upf3aQ3ULJ3 Gm28628-201ENSMUST00000187006 264 ntBASIC2.96□□□□□ -1.94
Upf3aQ3ULJ3 Gm28629-201ENSMUST00000187309 263 ntBASIC2.96□□□□□ -1.94
Upf3aQ3ULJ3 Gm44554-201ENSMUST00000208738 147 ntBASIC2.96□□□□□ -1.94
Upf3aQ3ULJ3 Gm7751-201ENSMUST00000212868 709 ntBASIC2.96□□□□□ -1.94
Upf3aQ3ULJ3 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.96□□□□□ -1.94
Upf3aQ3ULJ3 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC2.96□□□□□ -1.94
Upf3aQ3ULJ3 AC155167.3-201ENSMUST00000226349 217 ntBASIC2.96□□□□□ -1.94
Upf3aQ3ULJ3 AC115357.1-201ENSMUST00000227575 466 ntBASIC2.96□□□□□ -1.94
Upf3aQ3ULJ3 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Upf3aQ3ULJ3 Gm25699-201ENSMUST00000082896 167 ntBASIC2.96□□□□□ -1.94
Upf3aQ3ULJ3 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Upf3aQ3ULJ3 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Upf3aQ3ULJ3 Gm23431-201ENSMUST00000104006 107 ntBASIC2.95□□□□□ -1.94
Upf3aQ3ULJ3 Gm12803-201ENSMUST00000118907 821 ntBASIC2.95□□□□□ -1.94
Upf3aQ3ULJ3 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC2.95□□□□□ -1.94
Upf3aQ3ULJ3 Gm24840-201ENSMUST00000122603 147 ntBASIC2.95□□□□□ -1.94
Upf3aQ3ULJ3 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC2.95□□□□□ -1.94
Upf3aQ3ULJ3 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC2.95□□□□□ -1.94
Upf3aQ3ULJ3 Gm16218-201ENSMUST00000155424 388 ntBASIC2.95□□□□□ -1.94
Upf3aQ3ULJ3 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Upf3aQ3ULJ3 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC2.95□□□□□ -1.94
Upf3aQ3ULJ3 Gm24080-201ENSMUST00000175178 232 ntBASIC2.95□□□□□ -1.94
Upf3aQ3ULJ3 Mir5136-201ENSMUST00000175573 76 ntBASIC2.95□□□□□ -1.94
Upf3aQ3ULJ3 Gm20718-201ENSMUST00000176058 259 ntBASIC2.95□□□□□ -1.94
Upf3aQ3ULJ3 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC2.95□□□□□ -1.94
Upf3aQ3ULJ3 Gm6113-201ENSMUST00000180319 639 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 121.5 ms