Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm29573-201ENSMUST00000190291 919 ntBASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 AL603834.1-201ENSMUST00000198372 121 ntBASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm44594-201ENSMUST00000208982 407 ntBASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm46233-201ENSMUST00000217831 449 ntBASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 AC121844.1-201ENSMUST00000218706 137 ntBASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 AC121966.1-201ENSMUST00000221458 282 ntBASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 AC154329.2-201ENSMUST00000225257 383 ntBASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm26121-201ENSMUST00000083364 162 ntBASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Trafd1Q3UDK1 Gm8675-201ENSMUST00000201408 1856 ntBASIC3.03□□□□□ -1.92
Trafd1Q3UDK1 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
Trafd1Q3UDK1 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Trafd1Q3UDK1 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Trafd1Q3UDK1 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Trafd1Q3UDK1 Gm11576-201ENSMUST00000117433 417 ntBASIC3.03□□□□□ -1.92
Trafd1Q3UDK1 Gm12268-201ENSMUST00000118398 442 ntBASIC3.03□□□□□ -1.92
Trafd1Q3UDK1 Gm7308-201ENSMUST00000121087 447 ntBASIC3.03□□□□□ -1.92
Trafd1Q3UDK1 Gm15878-201ENSMUST00000127561 306 ntBASIC3.03□□□□□ -1.92
Trafd1Q3UDK1 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC3.03□□□□□ -1.92
Trafd1Q3UDK1 Mir3112-201ENSMUST00000175431 82 ntBASIC3.03□□□□□ -1.92
Trafd1Q3UDK1 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC3.03□□□□□ -1.92
Trafd1Q3UDK1 Gm26991-201ENSMUST00000180950 620 ntBASIC3.03□□□□□ -1.92
Trafd1Q3UDK1 Gm28628-201ENSMUST00000187006 264 ntBASIC3.03□□□□□ -1.92
Trafd1Q3UDK1 Gm28629-201ENSMUST00000187309 263 ntBASIC3.03□□□□□ -1.92
Trafd1Q3UDK1 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC3.03□□□□□ -1.92
Trafd1Q3UDK1 Gm6842-201ENSMUST00000211361 390 ntBASIC3.03□□□□□ -1.92
Trafd1Q3UDK1 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Trafd1Q3UDK1 AC115750.1-201ENSMUST00000220441 567 ntBASIC3.03□□□□□ -1.92
Trafd1Q3UDK1 AC174082.1-201ENSMUST00000221106 307 ntBASIC3.03□□□□□ -1.92
Trafd1Q3UDK1 AC102575.1-201ENSMUST00000225348 547 ntBASIC3.03□□□□□ -1.92
Trafd1Q3UDK1 AC164597.2-201ENSMUST00000226738 603 ntBASIC3.03□□□□□ -1.92
Trafd1Q3UDK1 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Trafd1Q3UDK1 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Trafd1Q3UDK1 Gm25202-201ENSMUST00000082838 191 ntBASIC3.03□□□□□ -1.92
Trafd1Q3UDK1 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Trafd1Q3UDK1 Gm42721-201ENSMUST00000197165 1523 ntBASIC3.03□□□□□ -1.92
Trafd1Q3UDK1 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Trafd1Q3UDK1 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Trafd1Q3UDK1 Gm25308-201ENSMUST00000104171 158 ntBASIC3.02□□□□□ -1.93
Trafd1Q3UDK1 Gm23747-201ENSMUST00000104228 131 ntBASIC3.02□□□□□ -1.93
Trafd1Q3UDK1 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC3.02□□□□□ -1.93
Trafd1Q3UDK1 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
Trafd1Q3UDK1 Mir467h-201ENSMUST00000116759 121 ntBASIC3.02□□□□□ -1.93
Trafd1Q3UDK1 Gm25539-201ENSMUST00000116886 122 ntBASIC3.02□□□□□ -1.93
Trafd1Q3UDK1 Gm14358-201ENSMUST00000118458 403 ntBASIC3.02□□□□□ -1.93
Trafd1Q3UDK1 Gm14731-201ENSMUST00000119216 376 ntBASIC3.02□□□□□ -1.93
Trafd1Q3UDK1 Gm12723-201ENSMUST00000120700 451 ntBASIC3.02□□□□□ -1.93
Trafd1Q3UDK1 Gm8840-201ENSMUST00000122454 386 ntBASIC3.02□□□□□ -1.93
Trafd1Q3UDK1 Mup-ps2-201ENSMUST00000142602 533 ntBASIC3.02□□□□□ -1.93
Trafd1Q3UDK1 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC3.02□□□□□ -1.93
Trafd1Q3UDK1 Gm24060-201ENSMUST00000157494 95 ntBASIC3.02□□□□□ -1.93
Trafd1Q3UDK1 Gm26271-201ENSMUST00000158349 104 ntBASIC3.02□□□□□ -1.93
Trafd1Q3UDK1 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Trafd1Q3UDK1 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC3.02□□□□□ -1.93
Trafd1Q3UDK1 Gm27783-201ENSMUST00000183534 105 ntBASIC3.02□□□□□ -1.93
Trafd1Q3UDK1 Gm27861-201ENSMUST00000183920 214 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms