Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Gm45344-201ENSMUST00000211610 341 ntBASIC4.76□□□□□ -1.65
Ddb1Q3U1J4 AC150314.1-201ENSMUST00000214798 238 ntBASIC4.76□□□□□ -1.65
Ddb1Q3U1J4 AC102369.1-201ENSMUST00000218415 373 ntBASIC4.76□□□□□ -1.65
Ddb1Q3U1J4 CT030135.1-201ENSMUST00000223760 570 ntBASIC4.76□□□□□ -1.65
Ddb1Q3U1J4 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC4.76□□□□□ -1.65
Ddb1Q3U1J4 Gm23242-201ENSMUST00000083055 107 ntBASIC4.76□□□□□ -1.65
Ddb1Q3U1J4 Mir19a-201ENSMUST00000083482 82 ntBASIC4.76□□□□□ -1.65
Ddb1Q3U1J4 Gm6361-201ENSMUST00000091031 435 ntBASIC4.76□□□□□ -1.65
Ddb1Q3U1J4 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Ddb1Q3U1J4 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC4.76□□□□□ -1.65
Ddb1Q3U1J4 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC4.76□□□□□ -1.65
Ddb1Q3U1J4 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
Ddb1Q3U1J4 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Ddb1Q3U1J4 Gm26140-201ENSMUST00000103807 110 ntBASIC4.75□□□□□ -1.65
Ddb1Q3U1J4 Gm25560-201ENSMUST00000104606 176 ntBASIC4.75□□□□□ -1.65
Ddb1Q3U1J4 Gm15148-201ENSMUST00000117602 156 ntBASIC4.75□□□□□ -1.65
Ddb1Q3U1J4 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC4.75□□□□□ -1.65
Ddb1Q3U1J4 Gm14469-201ENSMUST00000118363 202 ntBASIC4.75□□□□□ -1.65
Ddb1Q3U1J4 Gm14566-201ENSMUST00000118915 321 ntBASIC4.75□□□□□ -1.65
Ddb1Q3U1J4 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC4.75□□□□□ -1.65
Ddb1Q3U1J4 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC4.75□□□□□ -1.65
Ddb1Q3U1J4 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC4.75□□□□□ -1.65
Ddb1Q3U1J4 Gm20462-201ENSMUST00000172623 408 ntBASIC4.75□□□□□ -1.65
Ddb1Q3U1J4 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC4.75□□□□□ -1.65
Ddb1Q3U1J4 Gm20693-201ENSMUST00000177431 211 ntBASIC4.75□□□□□ -1.65
Ddb1Q3U1J4 Gm22716-201ENSMUST00000177596 107 ntBASIC4.75□□□□□ -1.65
Ddb1Q3U1J4 Gm7094-201ENSMUST00000178379 366 ntBASIC4.75□□□□□ -1.65
Ddb1Q3U1J4 Gm20773-201ENSMUST00000178940 681 ntBASIC4.75□□□□□ -1.65
Ddb1Q3U1J4 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC4.75□□□□□ -1.65
Ddb1Q3U1J4 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC4.75□□□□□ -1.65
Ddb1Q3U1J4 Gm28283-201ENSMUST00000185509 178 ntBASIC4.75□□□□□ -1.65
Ddb1Q3U1J4 Gm28148-201ENSMUST00000186924 697 ntBASIC4.75□□□□□ -1.65
Ddb1Q3U1J4 Gm29216-201ENSMUST00000187117 492 ntBASIC4.75□□□□□ -1.65
Ddb1Q3U1J4 Gm5116-201ENSMUST00000187732 463 ntBASIC4.75□□□□□ -1.65
Ddb1Q3U1J4 Gm29627-201ENSMUST00000187984 463 ntBASIC4.75□□□□□ -1.65
Ddb1Q3U1J4 Gm10193-201ENSMUST00000188288 231 ntBASIC4.75□□□□□ -1.65
Ddb1Q3U1J4 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC4.75□□□□□ -1.65
Ddb1Q3U1J4 AL669916.5-201ENSMUST00000214874 361 ntBASIC4.75□□□□□ -1.65
Ddb1Q3U1J4 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC4.75□□□□□ -1.65
Ddb1Q3U1J4 Gm7198-201ENSMUST00000219635 1074 ntBASIC4.75□□□□□ -1.65
Ddb1Q3U1J4 AC119573.1-201ENSMUST00000227960 757 ntBASIC4.75□□□□□ -1.65
Ddb1Q3U1J4 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Ddb1Q3U1J4 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Ddb1Q3U1J4 Gm26128-201ENSMUST00000083170 110 ntBASIC4.75□□□□□ -1.65
Ddb1Q3U1J4 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Ddb1Q3U1J4 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
Ddb1Q3U1J4 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
Ddb1Q3U1J4 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Ddb1Q3U1J4 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Ddb1Q3U1J4 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Ddb1Q3U1J4 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Ddb1Q3U1J4 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Ddb1Q3U1J4 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
Ddb1Q3U1J4 AC154634.4-201ENSMUST00000226077 2665 ntBASIC4.74□□□□□ -1.65
Ddb1Q3U1J4 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Ddb1Q3U1J4 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Ddb1Q3U1J4 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Ddb1Q3U1J4 Gm24067-201ENSMUST00000104514 85 ntBASIC4.74□□□□□ -1.65
Ddb1Q3U1J4 Gm23206-201ENSMUST00000122720 184 ntBASIC4.74□□□□□ -1.65
Ddb1Q3U1J4 Gm24537-201ENSMUST00000157950 102 ntBASIC4.74□□□□□ -1.65
Ddb1Q3U1J4 Gm26001-201ENSMUST00000157989 103 ntBASIC4.74□□□□□ -1.65
Ddb1Q3U1J4 Gm24675-201ENSMUST00000158757 259 ntBASIC4.74□□□□□ -1.65
Ddb1Q3U1J4 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Ddb1Q3U1J4 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC4.74□□□□□ -1.65
Ddb1Q3U1J4 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC4.74□□□□□ -1.65
Ddb1Q3U1J4 Gm42475-201ENSMUST00000201212 295 ntBASIC4.74□□□□□ -1.65
Ddb1Q3U1J4 Gm44927-201ENSMUST00000207573 716 ntBASIC4.74□□□□□ -1.65
Ddb1Q3U1J4 Gm45400-201ENSMUST00000211603 653 ntBASIC4.74□□□□□ -1.65
Ddb1Q3U1J4 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Ddb1Q3U1J4 AC109212.1-201ENSMUST00000215561 427 ntBASIC4.74□□□□□ -1.65
Ddb1Q3U1J4 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
Ddb1Q3U1J4 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Ddb1Q3U1J4 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Ddb1Q3U1J4 Gm40020-201ENSMUST00000215677 1635 ntBASIC4.74□□□□□ -1.65
Ddb1Q3U1J4 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Ddb1Q3U1J4 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.74□□□□□ -1.65
Ddb1Q3U1J4 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Ddb1Q3U1J4 Gm6757-201ENSMUST00000189810 1706 ntBASIC4.74□□□□□ -1.65
Ddb1Q3U1J4 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
Ddb1Q3U1J4 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Ddb1Q3U1J4 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC4.74□□□□□ -1.65
Ddb1Q3U1J4 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Ddb1Q3U1J4 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Ddb1Q3U1J4 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Ddb1Q3U1J4 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC4.73□□□□□ -1.65
Ddb1Q3U1J4 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Ddb1Q3U1J4 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC4.73□□□□□ -1.65
Ddb1Q3U1J4 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Ddb1Q3U1J4 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Ddb1Q3U1J4 Gm24118-201ENSMUST00000103972 126 ntBASIC4.73□□□□□ -1.65
Ddb1Q3U1J4 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Ddb1Q3U1J4 Gm14867-201ENSMUST00000120156 866 ntBASIC4.73□□□□□ -1.65
Ddb1Q3U1J4 Gm14926-201ENSMUST00000120650 508 ntBASIC4.73□□□□□ -1.65
Ddb1Q3U1J4 Gm13557-201ENSMUST00000120771 382 ntBASIC4.73□□□□□ -1.65
Ddb1Q3U1J4 Gm14559-201ENSMUST00000121745 496 ntBASIC4.73□□□□□ -1.65
Ddb1Q3U1J4 Gm9225-201ENSMUST00000121921 836 ntBASIC4.73□□□□□ -1.65
Ddb1Q3U1J4 Gm25294-201ENSMUST00000122791 104 ntBASIC4.73□□□□□ -1.65
Ddb1Q3U1J4 Gm6265-201ENSMUST00000149263 231 ntBASIC4.73□□□□□ -1.65
Ddb1Q3U1J4 Gm25666-201ENSMUST00000157702 107 ntBASIC4.73□□□□□ -1.65
Ddb1Q3U1J4 Gm23583-201ENSMUST00000158533 289 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms