Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 AC139376.1-201ENSMUST00000220056 1250 ntBASIC3.67□□□□□ -1.82
CiitaP79621 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.67□□□□□ -1.82
CiitaP79621 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.67□□□□□ -1.82
CiitaP79621 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
CiitaP79621 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CiitaP79621 AC115047.2-201ENSMUST00000214421 1848 ntBASIC3.66□□□□□ -1.82
CiitaP79621 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CiitaP79621 Gm24118-201ENSMUST00000103972 126 ntBASIC3.66□□□□□ -1.82
CiitaP79621 Mir190b-201ENSMUST00000104803 80 ntBASIC3.66□□□□□ -1.82
CiitaP79621 Gm12805-201ENSMUST00000117305 1048 ntBASIC3.66□□□□□ -1.82
CiitaP79621 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
CiitaP79621 Gm12639-201ENSMUST00000121400 493 ntBASIC3.66□□□□□ -1.82
CiitaP79621 Nron-204ENSMUST00000158971 370 ntBASIC3.66□□□□□ -1.82
CiitaP79621 Gm17183-201ENSMUST00000171170 493 ntBASIC3.66□□□□□ -1.82
CiitaP79621 Gm27374-201ENSMUST00000183660 81 ntBASIC3.66□□□□□ -1.82
CiitaP79621 Gm28560-201ENSMUST00000186091 315 ntBASIC3.66□□□□□ -1.82
CiitaP79621 Gm28334-201ENSMUST00000186653 315 ntBASIC3.66□□□□□ -1.82
CiitaP79621 Gm29452-201ENSMUST00000187996 313 ntBASIC3.66□□□□□ -1.82
CiitaP79621 Gm28860-201ENSMUST00000188103 313 ntBASIC3.66□□□□□ -1.82
CiitaP79621 Gm28495-201ENSMUST00000188452 315 ntBASIC3.66□□□□□ -1.82
CiitaP79621 Gm28232-201ENSMUST00000188683 315 ntBASIC3.66□□□□□ -1.82
CiitaP79621 Gm28481-201ENSMUST00000189231 315 ntBASIC3.66□□□□□ -1.82
CiitaP79621 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CiitaP79621 Gm29059-201ENSMUST00000191534 315 ntBASIC3.66□□□□□ -1.82
CiitaP79621 Gm37765-201ENSMUST00000192395 315 ntBASIC3.66□□□□□ -1.82
CiitaP79621 Gm37237-201ENSMUST00000192893 315 ntBASIC3.66□□□□□ -1.82
CiitaP79621 Gm18403-201ENSMUST00000192907 529 ntBASIC3.66□□□□□ -1.82
CiitaP79621 Gm36968-201ENSMUST00000193737 315 ntBASIC3.66□□□□□ -1.82
CiitaP79621 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC3.66□□□□□ -1.82
CiitaP79621 Gm38290-201ENSMUST00000195238 315 ntBASIC3.66□□□□□ -1.82
CiitaP79621 Gm9023-201ENSMUST00000198408 1038 ntBASIC3.66□□□□□ -1.82
CiitaP79621 Gm44449-201ENSMUST00000203610 153 ntBASIC3.66□□□□□ -1.82
CiitaP79621 AC124489.2-201ENSMUST00000223930 589 ntBASIC3.66□□□□□ -1.82
CiitaP79621 AC147633.1-201ENSMUST00000225134 259 ntBASIC3.66□□□□□ -1.82
CiitaP79621 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CiitaP79621 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CiitaP79621 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CiitaP79621 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CiitaP79621 Gm44625-201ENSMUST00000207838 1561 ntBASIC3.66□□□□□ -1.82
CiitaP79621 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.66□□□□□ -1.82
CiitaP79621 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CiitaP79621 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.65□□□□□ -1.82
CiitaP79621 Gm14622-201ENSMUST00000117117 468 ntBASIC3.65□□□□□ -1.83
CiitaP79621 Gm13167-201ENSMUST00000118554 578 ntBASIC3.65□□□□□ -1.83
CiitaP79621 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC3.65□□□□□ -1.83
CiitaP79621 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC3.65□□□□□ -1.83
CiitaP79621 Gm5958-201ENSMUST00000147698 297 ntBASIC3.65□□□□□ -1.83
CiitaP79621 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CiitaP79621 Gm23028-201ENSMUST00000158773 265 ntBASIC3.65□□□□□ -1.83
CiitaP79621 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC3.65□□□□□ -1.83
CiitaP79621 Gm18417-201ENSMUST00000176564 648 ntBASIC3.65□□□□□ -1.83
CiitaP79621 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC3.65□□□□□ -1.83
CiitaP79621 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.65□□□□□ -1.83
CiitaP79621 Gm27599-201ENSMUST00000183758 174 ntBASIC3.65□□□□□ -1.83
CiitaP79621 Gm8676-201ENSMUST00000184206 637 ntBASIC3.65□□□□□ -1.83
CiitaP79621 Gm28666-201ENSMUST00000186649 274 ntBASIC3.65□□□□□ -1.83
CiitaP79621 Gm29576-201ENSMUST00000188020 678 ntBASIC3.65□□□□□ -1.83
CiitaP79621 Gm28802-201ENSMUST00000188624 944 ntBASIC3.65□□□□□ -1.83
CiitaP79621 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
CiitaP79621 Gm6651-201ENSMUST00000189471 271 ntBASIC3.65□□□□□ -1.83
CiitaP79621 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
CiitaP79621 Gm28354-201ENSMUST00000190904 678 ntBASIC3.65□□□□□ -1.83
CiitaP79621 Gm28314-201ENSMUST00000191276 345 ntBASIC3.65□□□□□ -1.83
CiitaP79621 Gm43217-201ENSMUST00000199513 367 ntBASIC3.65□□□□□ -1.83
CiitaP79621 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.65□□□□□ -1.83
CiitaP79621 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC3.65□□□□□ -1.83
CiitaP79621 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC3.65□□□□□ -1.83
CiitaP79621 Gm18488-201ENSMUST00000215082 364 ntBASIC3.65□□□□□ -1.83
CiitaP79621 AC155305.1-201ENSMUST00000222207 319 ntBASIC3.65□□□□□ -1.83
CiitaP79621 Gm18388-201ENSMUST00000222339 557 ntBASIC3.65□□□□□ -1.83
CiitaP79621 AC192334.2-201ENSMUST00000223087 1091 ntBASIC3.65□□□□□ -1.83
CiitaP79621 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
CiitaP79621 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC3.65□□□□□ -1.83
CiitaP79621 Olfr1193-201ENSMUST00000081697 957 ntBASIC3.65□□□□□ -1.83
CiitaP79621 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.65□□□□□ -1.83
CiitaP79621 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
CiitaP79621 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
CiitaP79621 Gm45872-201ENSMUST00000209804 1584 ntBASIC3.64□□□□□ -1.83
CiitaP79621 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CiitaP79621 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CiitaP79621 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
CiitaP79621 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC3.64□□□□□ -1.83
CiitaP79621 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC3.64□□□□□ -1.83
CiitaP79621 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
CiitaP79621 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CiitaP79621 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CiitaP79621 Gm24127-201ENSMUST00000104110 130 ntBASIC3.64□□□□□ -1.83
CiitaP79621 Gm11321-201ENSMUST00000121257 902 ntBASIC3.64□□□□□ -1.83
CiitaP79621 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC3.64□□□□□ -1.83
CiitaP79621 Gm16588-201ENSMUST00000162889 355 ntBASIC3.64□□□□□ -1.83
CiitaP79621 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
CiitaP79621 Gm29516-201ENSMUST00000190402 468 ntBASIC3.64□□□□□ -1.83
CiitaP79621 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC3.64□□□□□ -1.83
CiitaP79621 Gm18956-201ENSMUST00000192857 480 ntBASIC3.64□□□□□ -1.83
CiitaP79621 Gm42805-201ENSMUST00000196158 276 ntBASIC3.64□□□□□ -1.83
CiitaP79621 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC3.64□□□□□ -1.83
CiitaP79621 Igkv2-105-201ENSMUST00000196931 377 ntBASIC3.64□□□□□ -1.83
CiitaP79621 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CiitaP79621 Gm43239-201ENSMUST00000200131 201 ntBASIC3.64□□□□□ -1.83
CiitaP79621 Gm44282-201ENSMUST00000203199 190 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 93 ms