Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC3.24□□□□□ -1.89
Cdh11P55288 Gm24544-201ENSMUST00000103862 110 ntBASIC3.24□□□□□ -1.89
Cdh11P55288 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC3.24□□□□□ -1.89
Cdh11P55288 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Cdh11P55288 Gm14411-201ENSMUST00000121798 914 ntBASIC3.24□□□□□ -1.89
Cdh11P55288 Gm23463-201ENSMUST00000122468 99 ntBASIC3.24□□□□□ -1.89
Cdh11P55288 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.24□□□□□ -1.89
Cdh11P55288 Gm4916-201ENSMUST00000126139 642 ntBASIC3.24□□□□□ -1.89
Cdh11P55288 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.24□□□□□ -1.89
Cdh11P55288 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC3.24□□□□□ -1.89
Cdh11P55288 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC3.24□□□□□ -1.89
Cdh11P55288 Gm26348-201ENSMUST00000157528 240 ntBASIC3.24□□□□□ -1.89
Cdh11P55288 Gm24553-201ENSMUST00000158653 131 ntBASIC3.24□□□□□ -1.89
Cdh11P55288 Gm15946-201ENSMUST00000160654 423 ntBASIC3.24□□□□□ -1.89
Cdh11P55288 Ear-ps3-201ENSMUST00000168308 445 ntBASIC3.24□□□□□ -1.89
Cdh11P55288 Gm17183-201ENSMUST00000171170 493 ntBASIC3.24□□□□□ -1.89
Cdh11P55288 Gm25748-201ENSMUST00000175487 70 ntBASIC3.24□□□□□ -1.89
Cdh11P55288 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Cdh11P55288 Gm27236-201ENSMUST00000184147 442 ntBASIC3.24□□□□□ -1.89
Cdh11P55288 Gm28146-201ENSMUST00000185517 701 ntBASIC3.24□□□□□ -1.89
Cdh11P55288 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC3.24□□□□□ -1.89
Cdh11P55288 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.24□□□□□ -1.89
Cdh11P55288 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Cdh11P55288 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Cdh11P55288 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC3.24□□□□□ -1.89
Cdh11P55288 Gm19243-201ENSMUST00000198592 269 ntBASIC3.24□□□□□ -1.89
Cdh11P55288 Gm43026-201ENSMUST00000202972 325 ntBASIC3.24□□□□□ -1.89
Cdh11P55288 Gm44076-201ENSMUST00000203072 520 ntBASIC3.24□□□□□ -1.89
Cdh11P55288 Gm8423-201ENSMUST00000211387 607 ntBASIC3.24□□□□□ -1.89
Cdh11P55288 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC3.24□□□□□ -1.89
Cdh11P55288 Gm8125-201ENSMUST00000216602 738 ntBASIC3.24□□□□□ -1.89
Cdh11P55288 AC140451.2-202ENSMUST00000226156 574 ntBASIC3.24□□□□□ -1.89
Cdh11P55288 AC102291.2-201ENSMUST00000228083 367 ntBASIC3.24□□□□□ -1.89
Cdh11P55288 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Cdh11P55288 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC3.24□□□□□ -1.89
Cdh11P55288 Gm37655-201ENSMUST00000193968 4123 ntBASIC3.24□□□□□ -1.89
Cdh11P55288 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.24□□□□□ -1.89
Cdh11P55288 Gm15095-201ENSMUST00000118996 1430 ntBASIC3.24□□□□□ -1.89
Cdh11P55288 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Cdh11P55288 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Cdh11P55288 Gm7905-201ENSMUST00000119933 1386 ntBASIC3.24□□□□□ -1.89
Cdh11P55288 Gm6207-201ENSMUST00000120075 1386 ntBASIC3.24□□□□□ -1.89
Cdh11P55288 Gm6228-201ENSMUST00000178856 1386 ntBASIC3.24□□□□□ -1.89
Cdh11P55288 Gm6221-201ENSMUST00000180064 1386 ntBASIC3.24□□□□□ -1.89
Cdh11P55288 Gm37848-201ENSMUST00000195288 3103 ntBASIC3.24□□□□□ -1.89
Cdh11P55288 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Cdh11P55288 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.23□□□□□ -1.89
Cdh11P55288 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Cdh11P55288 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Cdh11P55288 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Cdh11P55288 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.23□□□□□ -1.89
Cdh11P55288 Gm24273-201ENSMUST00000102332 164 ntBASIC3.23□□□□□ -1.89
Cdh11P55288 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC3.23□□□□□ -1.89
Cdh11P55288 Gm14293-201ENSMUST00000118528 577 ntBASIC3.23□□□□□ -1.89
Cdh11P55288 Gm14292-201ENSMUST00000118761 456 ntBASIC3.23□□□□□ -1.89
Cdh11P55288 Gm6071-201ENSMUST00000119561 440 ntBASIC3.23□□□□□ -1.89
Cdh11P55288 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC3.23□□□□□ -1.89
Cdh11P55288 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC3.23□□□□□ -1.89
Cdh11P55288 Gm22320-201ENSMUST00000157149 312 ntBASIC3.23□□□□□ -1.89
Cdh11P55288 Gm25365-201ENSMUST00000158852 121 ntBASIC3.23□□□□□ -1.89
Cdh11P55288 Gm2343-201ENSMUST00000161177 1042 ntBASIC3.23□□□□□ -1.89
Cdh11P55288 Mir3066-201ENSMUST00000175296 83 ntBASIC3.23□□□□□ -1.89
Cdh11P55288 Gm25670-201ENSMUST00000178423 107 ntBASIC3.23□□□□□ -1.89
Cdh11P55288 Gm26239-201ENSMUST00000178842 107 ntBASIC3.23□□□□□ -1.89
Cdh11P55288 Gm24267-201ENSMUST00000179841 107 ntBASIC3.23□□□□□ -1.89
Cdh11P55288 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC3.23□□□□□ -1.89
Cdh11P55288 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC3.23□□□□□ -1.89
Cdh11P55288 Gm27957-201ENSMUST00000184054 127 ntBASIC3.23□□□□□ -1.89
Cdh11P55288 Gm29413-201ENSMUST00000186019 880 ntBASIC3.23□□□□□ -1.89
Cdh11P55288 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Cdh11P55288 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC3.23□□□□□ -1.89
Cdh11P55288 Gm29639-201ENSMUST00000188375 580 ntBASIC3.23□□□□□ -1.89
Cdh11P55288 Gm36984-201ENSMUST00000192770 235 ntBASIC3.23□□□□□ -1.89
Cdh11P55288 Gm37001-201ENSMUST00000193377 190 ntBASIC3.23□□□□□ -1.89
Cdh11P55288 Gm43541-201ENSMUST00000197208 581 ntBASIC3.23□□□□□ -1.89
Cdh11P55288 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.23□□□□□ -1.89
Cdh11P55288 Gm5551-201ENSMUST00000199720 690 ntBASIC3.23□□□□□ -1.89
Cdh11P55288 Gm44475-201ENSMUST00000204041 424 ntBASIC3.23□□□□□ -1.89
Cdh11P55288 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Cdh11P55288 Gm9068-201ENSMUST00000217393 455 ntBASIC3.23□□□□□ -1.89
Cdh11P55288 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.23□□□□□ -1.89
Cdh11P55288 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC3.23□□□□□ -1.89
Cdh11P55288 AC123618.1-201ENSMUST00000220174 360 ntBASIC3.23□□□□□ -1.89
Cdh11P55288 AC116589.1-201ENSMUST00000220634 327 ntBASIC3.23□□□□□ -1.89
Cdh11P55288 AC126673.2-201ENSMUST00000221052 686 ntBASIC3.23□□□□□ -1.89
Cdh11P55288 AC157654.1-201ENSMUST00000224130 820 ntBASIC3.23□□□□□ -1.89
Cdh11P55288 AC154329.2-201ENSMUST00000225257 383 ntBASIC3.23□□□□□ -1.89
Cdh11P55288 AC134420.1-201ENSMUST00000227027 289 ntBASIC3.23□□□□□ -1.89
Cdh11P55288 CT030662.1-201ENSMUST00000227380 232 ntBASIC3.23□□□□□ -1.89
Cdh11P55288 AC139845.2-201ENSMUST00000227504 436 ntBASIC3.23□□□□□ -1.89
Cdh11P55288 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Cdh11P55288 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Cdh11P55288 Gm24292-201ENSMUST00000082888 107 ntBASIC3.23□□□□□ -1.89
Cdh11P55288 Gm10242-201ENSMUST00000090064 330 ntBASIC3.23□□□□□ -1.89
Cdh11P55288 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Cdh11P55288 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Cdh11P55288 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Cdh11P55288 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Cdh11P55288 Gm16436-201ENSMUST00000121510 1607 ntBASIC3.22□□□□□ -1.89
Cdh11P55288 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms