Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm29281-201ENSMUST00000188077 381 ntBASIC3.1□□□□□ -1.91
Cux1P53564 Mir7232-201ENSMUST00000197929 74 ntBASIC3.1□□□□□ -1.91
Cux1P53564 CT030187.1-201ENSMUST00000220605 252 ntBASIC3.1□□□□□ -1.91
Cux1P53564 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Cux1P53564 Gm19194-201ENSMUST00000192015 3774 ntBASIC3.09□□□□□ -1.91
Cux1P53564 Gm8080-201ENSMUST00000122046 1155 ntBASIC3.09□□□□□ -1.91
Cux1P53564 Gm23467-201ENSMUST00000157127 159 ntBASIC3.09□□□□□ -1.91
Cux1P53564 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC3.09□□□□□ -1.91
Cux1P53564 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.09□□□□□ -1.91
Cux1P53564 Gm38104-201ENSMUST00000195121 1895 ntBASIC3.09□□□□□ -1.92
Cux1P53564 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Cux1P53564 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC3.09□□□□□ -1.92
Cux1P53564 Gm26171-201ENSMUST00000158422 131 ntBASIC3.09□□□□□ -1.92
Cux1P53564 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC3.09□□□□□ -1.92
Cux1P53564 Gm43718-201ENSMUST00000197524 1857 ntBASIC3.08□□□□□ -1.92
Cux1P53564 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Cux1P53564 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Cux1P53564 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC3.08□□□□□ -1.92
Cux1P53564 Mir1892-201ENSMUST00000197752 80 ntBASIC3.08□□□□□ -1.92
Cux1P53564 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC3.08□□□□□ -1.92
Cux1P53564 AC241593.1-201ENSMUST00000224768 397 ntBASIC3.08□□□□□ -1.92
Cux1P53564 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC3.07□□□□□ -1.92
Cux1P53564 Gm11430-201ENSMUST00000121317 217 ntBASIC3.07□□□□□ -1.92
Cux1P53564 Gm13419-201ENSMUST00000121711 271 ntBASIC3.07□□□□□ -1.92
Cux1P53564 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC3.07□□□□□ -1.92
Cux1P53564 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC3.07□□□□□ -1.92
Cux1P53564 Gm20776-201ENSMUST00000189940 700 ntBASIC3.07□□□□□ -1.92
Cux1P53564 AC144671.1-201ENSMUST00000215265 99 ntBASIC3.07□□□□□ -1.92
Cux1P53564 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Cux1P53564 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Cux1P53564 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
Cux1P53564 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Cux1P53564 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.06□□□□□ -1.92
Cux1P53564 Gm13432-201ENSMUST00000118861 241 ntBASIC3.06□□□□□ -1.92
Cux1P53564 Gm22556-201ENSMUST00000157803 100 ntBASIC3.06□□□□□ -1.92
Cux1P53564 Mir7016-201ENSMUST00000184308 72 ntBASIC3.06□□□□□ -1.92
Cux1P53564 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC3.06□□□□□ -1.92
Cux1P53564 AC154828.2-201ENSMUST00000220908 1070 ntBASIC3.06□□□□□ -1.92
Cux1P53564 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Cux1P53564 Mir147-201ENSMUST00000102354 79 ntBASIC3.05□□□□□ -1.92
Cux1P53564 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
Cux1P53564 Gm14229-201ENSMUST00000121178 850 ntBASIC3.05□□□□□ -1.92
Cux1P53564 Gm8224-201ENSMUST00000166178 497 ntBASIC3.05□□□□□ -1.92
Cux1P53564 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Cux1P53564 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC3.05□□□□□ -1.92
Cux1P53564 Gm28623-201ENSMUST00000187219 192 ntBASIC3.05□□□□□ -1.92
Cux1P53564 Gm37692-201ENSMUST00000192633 232 ntBASIC3.05□□□□□ -1.92
Cux1P53564 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC3.05□□□□□ -1.92
Cux1P53564 Gm18861-201ENSMUST00000202509 1186 ntBASIC3.05□□□□□ -1.92
Cux1P53564 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Cux1P53564 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Cux1P53564 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Cux1P53564 AC141884.1-201ENSMUST00000226327 636 ntBASIC3.05□□□□□ -1.92
Cux1P53564 Gm25099-201ENSMUST00000093716 116 ntBASIC3.05□□□□□ -1.92
Cux1P53564 Gm14559-201ENSMUST00000121745 496 ntBASIC3.04□□□□□ -1.92
Cux1P53564 Gm24379-201ENSMUST00000122695 86 ntBASIC3.04□□□□□ -1.92
Cux1P53564 Gm22727-201ENSMUST00000158090 116 ntBASIC3.04□□□□□ -1.92
Cux1P53564 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC3.04□□□□□ -1.92
Cux1P53564 Gm18660-201ENSMUST00000199542 629 ntBASIC3.04□□□□□ -1.92
Cux1P53564 Gm43901-201ENSMUST00000203247 453 ntBASIC3.04□□□□□ -1.92
Cux1P53564 Gm18899-201ENSMUST00000217663 546 ntBASIC3.04□□□□□ -1.92
Cux1P53564 CT030030.1-201ENSMUST00000218809 152 ntBASIC3.04□□□□□ -1.92
Cux1P53564 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC3.04□□□□□ -1.92
Cux1P53564 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Cux1P53564 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC3.04□□□□□ -1.92
Cux1P53564 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Cux1P53564 Gm44438-201ENSMUST00000204388 3236 ntBASIC3.04□□□□□ -1.92
Cux1P53564 Gm42671-201ENSMUST00000198013 1604 ntBASIC3.04□□□□□ -1.92
Cux1P53564 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Cux1P53564 Gm12509-201ENSMUST00000118033 609 ntBASIC3.03□□□□□ -1.92
Cux1P53564 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC3.03□□□□□ -1.92
Cux1P53564 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Cux1P53564 Gm9251-201ENSMUST00000197202 628 ntBASIC3.03□□□□□ -1.92
Cux1P53564 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Cux1P53564 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.03□□□□□ -1.92
Cux1P53564 Gm25832-201ENSMUST00000104140 130 ntBASIC3.03□□□□□ -1.92
Cux1P53564 Gm23229-201ENSMUST00000157297 105 ntBASIC3.03□□□□□ -1.92
Cux1P53564 Gm26352-201ENSMUST00000158223 125 ntBASIC3.03□□□□□ -1.92
Cux1P53564 Gm25606-201ENSMUST00000158363 95 ntBASIC3.03□□□□□ -1.92
Cux1P53564 Gm27952-201ENSMUST00000184748 105 ntBASIC3.03□□□□□ -1.92
Cux1P53564 AC124356.2-201ENSMUST00000221874 336 ntBASIC3.03□□□□□ -1.92
Cux1P53564 AC156559.1-201ENSMUST00000224158 222 ntBASIC3.03□□□□□ -1.92
Cux1P53564 Gm22723-201ENSMUST00000083820 129 ntBASIC3.03□□□□□ -1.92
Cux1P53564 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Cux1P53564 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
Cux1P53564 Gm43201-201ENSMUST00000195925 3416 ntBASIC3.02□□□□□ -1.93
Cux1P53564 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Cux1P53564 Gm26004-201ENSMUST00000158804 116 ntBASIC3.02□□□□□ -1.93
Cux1P53564 Gm17929-201ENSMUST00000186851 627 ntBASIC3.02□□□□□ -1.93
Cux1P53564 AC117814.1-201ENSMUST00000226135 352 ntBASIC3.02□□□□□ -1.93
Cux1P53564 AC152951.2-201ENSMUST00000218293 3587 ntBASIC3.02□□□□□ -1.93
Cux1P53564 Gm44897-201ENSMUST00000206187 1341 ntBASIC3.02□□□□□ -1.93
Cux1P53564 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Cux1P53564 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Cux1P53564 Gm14421-201ENSMUST00000121755 1958 ntBASIC3.01□□□□□ -1.93
Cux1P53564 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Cux1P53564 Gm11876-201ENSMUST00000120002 269 ntBASIC3.01□□□□□ -1.93
Cux1P53564 Gm17183-201ENSMUST00000171170 493 ntBASIC3.01□□□□□ -1.93
Cux1P53564 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC3.01□□□□□ -1.93
Cux1P53564 Gm27864-201ENSMUST00000183704 190 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms