Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Shmt1P50431 AC147615.2-201ENSMUST00000219876 2154 ntBASIC4.31□□□□□ -1.72
Shmt1P50431 Gm15101-201ENSMUST00000178818 1502 ntBASIC4.31□□□□□ -1.72
Shmt1P50431 Gm37096-201ENSMUST00000192317 2058 ntBASIC4.31□□□□□ -1.72
Shmt1P50431 Gm37718-201ENSMUST00000191655 2631 ntBASIC4.31□□□□□ -1.72
Shmt1P50431 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Shmt1P50431 Gm10484-201ENSMUST00000196372 4759 ntBASIC4.31□□□□□ -1.72
Shmt1P50431 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Shmt1P50431 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Shmt1P50431 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Shmt1P50431 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Shmt1P50431 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Shmt1P50431 Gm24792-201ENSMUST00000104286 128 ntBASIC4.31□□□□□ -1.72
Shmt1P50431 Gm10552-201ENSMUST00000113396 372 ntBASIC4.31□□□□□ -1.72
Shmt1P50431 Gm11221-201ENSMUST00000117230 597 ntBASIC4.31□□□□□ -1.72
Shmt1P50431 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC4.31□□□□□ -1.72
Shmt1P50431 Gm13478-201ENSMUST00000118312 413 ntBASIC4.31□□□□□ -1.72
Shmt1P50431 Gm12806-201ENSMUST00000119384 268 ntBASIC4.31□□□□□ -1.72
Shmt1P50431 Gm12379-201ENSMUST00000119607 391 ntBASIC4.31□□□□□ -1.72
Shmt1P50431 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC4.31□□□□□ -1.72
Shmt1P50431 Gm14977-201ENSMUST00000121626 812 ntBASIC4.31□□□□□ -1.72
Shmt1P50431 Gm22073-201ENSMUST00000122668 189 ntBASIC4.31□□□□□ -1.72
Shmt1P50431 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC4.31□□□□□ -1.72
Shmt1P50431 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC4.31□□□□□ -1.72
Shmt1P50431 Gm23167-201ENSMUST00000157155 103 ntBASIC4.31□□□□□ -1.72
Shmt1P50431 Gm24439-201ENSMUST00000157894 117 ntBASIC4.31□□□□□ -1.72
Shmt1P50431 Gm23760-201ENSMUST00000158350 116 ntBASIC4.31□□□□□ -1.72
Shmt1P50431 Gm22859-201ENSMUST00000174978 122 ntBASIC4.31□□□□□ -1.72
Shmt1P50431 Gm23191-201ENSMUST00000179147 107 ntBASIC4.31□□□□□ -1.72
Shmt1P50431 Gm26746-201ENSMUST00000181722 487 ntBASIC4.31□□□□□ -1.72
Shmt1P50431 Gm27385-201ENSMUST00000184747 104 ntBASIC4.31□□□□□ -1.72
Shmt1P50431 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC4.31□□□□□ -1.72
Shmt1P50431 Gm21088-201ENSMUST00000190875 316 ntBASIC4.31□□□□□ -1.72
Shmt1P50431 Gm37616-201ENSMUST00000193974 322 ntBASIC4.31□□□□□ -1.72
Shmt1P50431 Ighv12-1-201ENSMUST00000195542 329 ntBASIC4.31□□□□□ -1.72
Shmt1P50431 Gm44871-201ENSMUST00000207821 497 ntBASIC4.31□□□□□ -1.72
Shmt1P50431 Gm45735-201ENSMUST00000212779 319 ntBASIC4.31□□□□□ -1.72
Shmt1P50431 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC4.31□□□□□ -1.72
Shmt1P50431 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
Shmt1P50431 CT025606.1-201ENSMUST00000218273 324 ntBASIC4.31□□□□□ -1.72
Shmt1P50431 AC164567.2-201ENSMUST00000219363 445 ntBASIC4.31□□□□□ -1.72
Shmt1P50431 AC140344.1-201ENSMUST00000223384 387 ntBASIC4.31□□□□□ -1.72
Shmt1P50431 CT009713.4-201ENSMUST00000224246 272 ntBASIC4.31□□□□□ -1.72
Shmt1P50431 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Shmt1P50431 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC4.31□□□□□ -1.72
Shmt1P50431 Gm26128-201ENSMUST00000083170 110 ntBASIC4.31□□□□□ -1.72
Shmt1P50431 Gm25792-201ENSMUST00000083289 100 ntBASIC4.31□□□□□ -1.72
Shmt1P50431 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Shmt1P50431 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Shmt1P50431 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Shmt1P50431 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Shmt1P50431 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Shmt1P50431 Gm43200-201ENSMUST00000200385 2161 ntBASIC4.31□□□□□ -1.72
Shmt1P50431 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC4.31□□□□□ -1.72
Shmt1P50431 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Shmt1P50431 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Shmt1P50431 Gm8744-201ENSMUST00000204475 3581 ntBASIC4.3□□□□□ -1.72
Shmt1P50431 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC4.3□□□□□ -1.72
Shmt1P50431 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
Shmt1P50431 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
Shmt1P50431 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
Shmt1P50431 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
Shmt1P50431 Gm14714-201ENSMUST00000119743 439 ntBASIC4.3□□□□□ -1.72
Shmt1P50431 Gm11623-201ENSMUST00000120176 1225 ntBASIC4.3□□□□□ -1.72
Shmt1P50431 Gm7618-201ENSMUST00000121643 171 ntBASIC4.3□□□□□ -1.72
Shmt1P50431 Gm12872-201ENSMUST00000121835 320 ntBASIC4.3□□□□□ -1.72
Shmt1P50431 Gm13852-201ENSMUST00000122350 242 ntBASIC4.3□□□□□ -1.72
Shmt1P50431 Gm24441-201ENSMUST00000157235 281 ntBASIC4.3□□□□□ -1.72
Shmt1P50431 Gm22378-201ENSMUST00000157481 111 ntBASIC4.3□□□□□ -1.72
Shmt1P50431 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC4.3□□□□□ -1.72
Shmt1P50431 Mir3964-201ENSMUST00000174898 74 ntBASIC4.3□□□□□ -1.72
Shmt1P50431 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Shmt1P50431 Gm22951-201ENSMUST00000179471 107 ntBASIC4.3□□□□□ -1.72
Shmt1P50431 Gm11395-201ENSMUST00000181011 499 ntBASIC4.3□□□□□ -1.72
Shmt1P50431 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Shmt1P50431 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC4.3□□□□□ -1.72
Shmt1P50431 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
Shmt1P50431 Mir6363-201ENSMUST00000184880 114 ntBASIC4.3□□□□□ -1.72
Shmt1P50431 Gm28629-201ENSMUST00000187309 263 ntBASIC4.3□□□□□ -1.72
Shmt1P50431 Igkv2-105-201ENSMUST00000196931 377 ntBASIC4.3□□□□□ -1.72
Shmt1P50431 Gm44376-201ENSMUST00000197570 128 ntBASIC4.3□□□□□ -1.72
Shmt1P50431 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC4.3□□□□□ -1.72
Shmt1P50431 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC4.3□□□□□ -1.72
Shmt1P50431 Gm8820-201ENSMUST00000204077 571 ntBASIC4.3□□□□□ -1.72
Shmt1P50431 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC4.3□□□□□ -1.72
Shmt1P50431 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Shmt1P50431 CT571268.1-201ENSMUST00000222320 407 ntBASIC4.3□□□□□ -1.72
Shmt1P50431 AC122393.3-201ENSMUST00000226343 1059 ntBASIC4.3□□□□□ -1.72
Shmt1P50431 AC098719.1-201ENSMUST00000228920 371 ntBASIC4.3□□□□□ -1.72
Shmt1P50431 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Shmt1P50431 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Shmt1P50431 Olfr575-201ENSMUST00000084812 957 ntBASIC4.3□□□□□ -1.72
Shmt1P50431 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Shmt1P50431 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
Shmt1P50431 Gm44321-201ENSMUST00000204262 2855 ntBASIC4.3□□□□□ -1.72
Shmt1P50431 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Shmt1P50431 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.3□□□□□ -1.72
Shmt1P50431 Gm38212-201ENSMUST00000194081 2756 ntBASIC4.3□□□□□ -1.72
Shmt1P50431 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
Shmt1P50431 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms