Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Ercc3P49135 Gm24987-201ENSMUST00000104453 134 ntBASIC4.22□□□□□ -1.73
Ercc3P49135 Gm22072-201ENSMUST00000116850 121 ntBASIC4.22□□□□□ -1.73
Ercc3P49135 Gm11352-201ENSMUST00000119264 517 ntBASIC4.22□□□□□ -1.73
Ercc3P49135 Gm11704-201ENSMUST00000120031 214 ntBASIC4.22□□□□□ -1.73
Ercc3P49135 Mup-ps20-201ENSMUST00000121132 389 ntBASIC4.22□□□□□ -1.73
Ercc3P49135 Gm22988-201ENSMUST00000122759 144 ntBASIC4.22□□□□□ -1.73
Ercc3P49135 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Ercc3P49135 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC4.22□□□□□ -1.73
Ercc3P49135 Gm24190-201ENSMUST00000157976 216 ntBASIC4.22□□□□□ -1.73
Ercc3P49135 Gm25860-201ENSMUST00000158252 126 ntBASIC4.22□□□□□ -1.73
Ercc3P49135 Gm23257-201ENSMUST00000158322 132 ntBASIC4.22□□□□□ -1.73
Ercc3P49135 Gm25977-201ENSMUST00000158697 85 ntBASIC4.22□□□□□ -1.73
Ercc3P49135 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Ercc3P49135 Gm25194-201ENSMUST00000177987 79 ntBASIC4.22□□□□□ -1.73
Ercc3P49135 Gm37698-201ENSMUST00000192605 463 ntBASIC4.22□□□□□ -1.73
Ercc3P49135 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC4.22□□□□□ -1.73
Ercc3P49135 Gm43704-201ENSMUST00000196164 496 ntBASIC4.22□□□□□ -1.73
Ercc3P49135 Gm43198-201ENSMUST00000200927 326 ntBASIC4.22□□□□□ -1.73
Ercc3P49135 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC4.22□□□□□ -1.73
Ercc3P49135 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC4.22□□□□□ -1.73
Ercc3P49135 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC4.22□□□□□ -1.73
Ercc3P49135 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Ercc3P49135 CT030135.1-201ENSMUST00000223760 570 ntBASIC4.22□□□□□ -1.73
Ercc3P49135 AC118639.1-201ENSMUST00000227204 338 ntBASIC4.22□□□□□ -1.73
Ercc3P49135 Olfr1193-201ENSMUST00000081697 957 ntBASIC4.22□□□□□ -1.73
Ercc3P49135 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Ercc3P49135 Gm3956-201ENSMUST00000164882 2560 ntBASIC4.22□□□□□ -1.73
Ercc3P49135 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Ercc3P49135 Gm43883-201ENSMUST00000204002 3750 ntBASIC4.22□□□□□ -1.73
Ercc3P49135 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC4.22□□□□□ -1.73
Ercc3P49135 AC153887.2-201ENSMUST00000219160 3838 ntBASIC4.21□□□□□ -1.73
Ercc3P49135 Gm44925-201ENSMUST00000208879 2110 ntBASIC4.21□□□□□ -1.74
Ercc3P49135 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Ercc3P49135 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC4.21□□□□□ -1.74
Ercc3P49135 Gm22591-201ENSMUST00000104243 106 ntBASIC4.21□□□□□ -1.74
Ercc3P49135 Gm11490-201ENSMUST00000118128 272 ntBASIC4.21□□□□□ -1.74
Ercc3P49135 Gm12515-201ENSMUST00000120116 361 ntBASIC4.21□□□□□ -1.74
Ercc3P49135 Gm13751-201ENSMUST00000120280 752 ntBASIC4.21□□□□□ -1.74
Ercc3P49135 Gm25052-201ENSMUST00000122661 158 ntBASIC4.21□□□□□ -1.74
Ercc3P49135 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC4.21□□□□□ -1.74
Ercc3P49135 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC4.21□□□□□ -1.74
Ercc3P49135 Fth-ps2-201ENSMUST00000168364 516 ntBASIC4.21□□□□□ -1.74
Ercc3P49135 Gm20534-201ENSMUST00000172957 172 ntBASIC4.21□□□□□ -1.74
Ercc3P49135 Gm26141-201ENSMUST00000175299 126 ntBASIC4.21□□□□□ -1.74
Ercc3P49135 Gm26991-201ENSMUST00000180950 620 ntBASIC4.21□□□□□ -1.74
Ercc3P49135 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC4.21□□□□□ -1.74
Ercc3P49135 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Ercc3P49135 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC4.21□□□□□ -1.74
Ercc3P49135 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC4.21□□□□□ -1.74
Ercc3P49135 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Ercc3P49135 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC4.21□□□□□ -1.74
Ercc3P49135 Gm44128-201ENSMUST00000204909 219 ntBASIC4.21□□□□□ -1.74
Ercc3P49135 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC4.21□□□□□ -1.74
Ercc3P49135 AC156560.1-201ENSMUST00000221425 256 ntBASIC4.21□□□□□ -1.74
Ercc3P49135 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC4.21□□□□□ -1.74
Ercc3P49135 AC158521.1-201ENSMUST00000225295 660 ntBASIC4.21□□□□□ -1.74
Ercc3P49135 AC130823.2-201ENSMUST00000226169 290 ntBASIC4.21□□□□□ -1.74
Ercc3P49135 Gm22245-201ENSMUST00000082479 103 ntBASIC4.21□□□□□ -1.74
Ercc3P49135 Gm24147-201ENSMUST00000082763 144 ntBASIC4.21□□□□□ -1.74
Ercc3P49135 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Ercc3P49135 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Ercc3P49135 Gm44527-202ENSMUST00000204519 1314 ntBASIC4.21□□□□□ -1.74
Ercc3P49135 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC4.2□□□□□ -1.74
Ercc3P49135 Gm25088-201ENSMUST00000101803 79 ntBASIC4.2□□□□□ -1.74
Ercc3P49135 Gm26145-201ENSMUST00000104476 127 ntBASIC4.2□□□□□ -1.74
Ercc3P49135 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Ercc3P49135 Gm14751-201ENSMUST00000117693 222 ntBASIC4.2□□□□□ -1.74
Ercc3P49135 Gm12578-201ENSMUST00000121244 417 ntBASIC4.2□□□□□ -1.74
Ercc3P49135 Gm23885-201ENSMUST00000122682 294 ntBASIC4.2□□□□□ -1.74
Ercc3P49135 Gm23234-201ENSMUST00000157304 134 ntBASIC4.2□□□□□ -1.74
Ercc3P49135 Gm24534-201ENSMUST00000157949 291 ntBASIC4.2□□□□□ -1.74
Ercc3P49135 Gm24393-201ENSMUST00000158135 97 ntBASIC4.2□□□□□ -1.74
Ercc3P49135 Nron-204ENSMUST00000158971 370 ntBASIC4.2□□□□□ -1.74
Ercc3P49135 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Ercc3P49135 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC4.2□□□□□ -1.74
Ercc3P49135 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Ercc3P49135 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Ercc3P49135 Mir6382-201ENSMUST00000184055 110 ntBASIC4.2□□□□□ -1.74
Ercc3P49135 Gm28785-201ENSMUST00000187478 379 ntBASIC4.2□□□□□ -1.74
Ercc3P49135 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC4.2□□□□□ -1.74
Ercc3P49135 Gm37701-201ENSMUST00000192947 1100 ntBASIC4.2□□□□□ -1.74
Ercc3P49135 Gm37097-201ENSMUST00000193676 336 ntBASIC4.2□□□□□ -1.74
Ercc3P49135 Gm43489-201ENSMUST00000196810 993 ntBASIC4.2□□□□□ -1.74
Ercc3P49135 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC4.2□□□□□ -1.74
Ercc3P49135 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Ercc3P49135 AC153971.2-201ENSMUST00000214553 777 ntBASIC4.2□□□□□ -1.74
Ercc3P49135 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Ercc3P49135 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
Ercc3P49135 Gm24150-201ENSMUST00000082759 104 ntBASIC4.2□□□□□ -1.74
Ercc3P49135 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC4.2□□□□□ -1.74
Ercc3P49135 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Ercc3P49135 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Ercc3P49135 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Ercc3P49135 Gm6325-201ENSMUST00000122015 3114 ntBASIC4.19□□□□□ -1.74
Ercc3P49135 Gm37630-201ENSMUST00000194210 1456 ntBASIC4.19□□□□□ -1.74
Ercc3P49135 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Ercc3P49135 Gm7905-201ENSMUST00000119933 1386 ntBASIC4.19□□□□□ -1.74
Ercc3P49135 Gm6221-201ENSMUST00000180064 1386 ntBASIC4.19□□□□□ -1.74
Ercc3P49135 Gm25272-201ENSMUST00000104293 128 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms