Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm14577-201ENSMUST00000121134 256 ntBASIC2.36□□□□□ -2.03
Cdx2P43241 Gm13433-201ENSMUST00000121701 240 ntBASIC2.36□□□□□ -2.03
Cdx2P43241 Gm15111-201ENSMUST00000122142 878 ntBASIC2.36□□□□□ -2.03
Cdx2P43241 Gm15116-201ENSMUST00000122248 663 ntBASIC2.36□□□□□ -2.03
Cdx2P43241 Gm15147-201ENSMUST00000122263 483 ntBASIC2.36□□□□□ -2.03
Cdx2P43241 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.36□□□□□ -2.03
Cdx2P43241 Gm20450-201ENSMUST00000173652 147 ntBASIC2.36□□□□□ -2.03
Cdx2P43241 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Cdx2P43241 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC2.36□□□□□ -2.03
Cdx2P43241 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC2.36□□□□□ -2.03
Cdx2P43241 Gm19253-201ENSMUST00000204279 307 ntBASIC2.36□□□□□ -2.03
Cdx2P43241 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC2.36□□□□□ -2.03
Cdx2P43241 Gm45192-201ENSMUST00000206749 283 ntBASIC2.36□□□□□ -2.03
Cdx2P43241 Gm45380-201ENSMUST00000210465 315 ntBASIC2.36□□□□□ -2.03
Cdx2P43241 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC2.36□□□□□ -2.03
Cdx2P43241 AC116395.1-201ENSMUST00000225480 1143 ntBASIC2.36□□□□□ -2.03
Cdx2P43241 AC159242.1-201ENSMUST00000225832 194 ntBASIC2.36□□□□□ -2.03
Cdx2P43241 AC158142.3-201ENSMUST00000226230 675 ntBASIC2.36□□□□□ -2.03
Cdx2P43241 CT025525.3-201ENSMUST00000228858 366 ntBASIC2.36□□□□□ -2.03
Cdx2P43241 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Cdx2P43241 Gm24611-201ENSMUST00000083272 107 ntBASIC2.36□□□□□ -2.03
Cdx2P43241 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Cdx2P43241 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.35□□□□□ -2.03
Cdx2P43241 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Cdx2P43241 Mir592-201ENSMUST00000102113 96 ntBASIC2.35□□□□□ -2.03
Cdx2P43241 Gm23011-201ENSMUST00000104148 132 ntBASIC2.35□□□□□ -2.03
Cdx2P43241 Gm26473-201ENSMUST00000116763 127 ntBASIC2.35□□□□□ -2.03
Cdx2P43241 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC2.35□□□□□ -2.03
Cdx2P43241 Gm12956-201ENSMUST00000122184 414 ntBASIC2.35□□□□□ -2.03
Cdx2P43241 Gm23409-201ENSMUST00000158516 237 ntBASIC2.35□□□□□ -2.03
Cdx2P43241 Gm25839-201ENSMUST00000158921 103 ntBASIC2.35□□□□□ -2.03
Cdx2P43241 Gm16232-201ENSMUST00000162856 167 ntBASIC2.35□□□□□ -2.03
Cdx2P43241 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Cdx2P43241 Gm17065-201ENSMUST00000165245 239 ntBASIC2.35□□□□□ -2.03
Cdx2P43241 Gm17072-201ENSMUST00000166673 658 ntBASIC2.35□□□□□ -2.03
Cdx2P43241 Gm7909-201ENSMUST00000182688 614 ntBASIC2.35□□□□□ -2.03
Cdx2P43241 Mir6353-201ENSMUST00000183596 113 ntBASIC2.35□□□□□ -2.03
Cdx2P43241 Mir7009-201ENSMUST00000184519 64 ntBASIC2.35□□□□□ -2.03
Cdx2P43241 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC2.35□□□□□ -2.03
Cdx2P43241 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC2.35□□□□□ -2.03
Cdx2P43241 Igkv12-49-201ENSMUST00000197714 278 ntBASIC2.35□□□□□ -2.03
Cdx2P43241 Gm26379-202ENSMUST00000200225 132 ntBASIC2.35□□□□□ -2.03
Cdx2P43241 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC2.35□□□□□ -2.03
Cdx2P43241 Gm43600-201ENSMUST00000202134 223 ntBASIC2.35□□□□□ -2.03
Cdx2P43241 Gm45034-201ENSMUST00000206831 482 ntBASIC2.35□□□□□ -2.03
Cdx2P43241 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC2.35□□□□□ -2.03
Cdx2P43241 AC147545.1-201ENSMUST00000227528 108 ntBASIC2.35□□□□□ -2.03
Cdx2P43241 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Cdx2P43241 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Cdx2P43241 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC2.34□□□□□ -2.03
Cdx2P43241 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Cdx2P43241 Gm23472-201ENSMUST00000101806 191 ntBASIC2.34□□□□□ -2.03
Cdx2P43241 Mir542-201ENSMUST00000102186 85 ntBASIC2.34□□□□□ -2.03
Cdx2P43241 Gm15282-201ENSMUST00000117707 300 ntBASIC2.34□□□□□ -2.03
Cdx2P43241 Gm2066-201ENSMUST00000118046 389 ntBASIC2.34□□□□□ -2.03
Cdx2P43241 Gm2318-201ENSMUST00000119623 639 ntBASIC2.34□□□□□ -2.03
Cdx2P43241 Gm12495-201ENSMUST00000119750 447 ntBASIC2.34□□□□□ -2.03
Cdx2P43241 Gm2005-201ENSMUST00000120759 542 ntBASIC2.34□□□□□ -2.03
Cdx2P43241 Gm14623-201ENSMUST00000121398 603 ntBASIC2.34□□□□□ -2.03
Cdx2P43241 Gm12443-201ENSMUST00000122308 323 ntBASIC2.34□□□□□ -2.03
Cdx2P43241 Gm16363-201ENSMUST00000132460 877 ntBASIC2.34□□□□□ -2.03
Cdx2P43241 Gm22517-201ENSMUST00000158265 136 ntBASIC2.34□□□□□ -2.03
Cdx2P43241 Gm23005-201ENSMUST00000158950 136 ntBASIC2.34□□□□□ -2.03
Cdx2P43241 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Cdx2P43241 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
Cdx2P43241 Gm7438-201ENSMUST00000177664 639 ntBASIC2.34□□□□□ -2.03
Cdx2P43241 Gm24497-201ENSMUST00000177868 191 ntBASIC2.34□□□□□ -2.03
Cdx2P43241 Gm7408-201ENSMUST00000178014 639 ntBASIC2.34□□□□□ -2.03
Cdx2P43241 Gm7386-201ENSMUST00000178020 639 ntBASIC2.34□□□□□ -2.03
Cdx2P43241 Gm3657-201ENSMUST00000178170 639 ntBASIC2.34□□□□□ -2.03
Cdx2P43241 Gm7415-201ENSMUST00000178205 639 ntBASIC2.34□□□□□ -2.03
Cdx2P43241 Gm7398-201ENSMUST00000178589 639 ntBASIC2.34□□□□□ -2.03
Cdx2P43241 Gm7391-201ENSMUST00000178680 639 ntBASIC2.34□□□□□ -2.03
Cdx2P43241 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Cdx2P43241 Gm7375-201ENSMUST00000179232 639 ntBASIC2.34□□□□□ -2.03
Cdx2P43241 Gm25939-201ENSMUST00000179876 191 ntBASIC2.34□□□□□ -2.03
Cdx2P43241 Gm3681-201ENSMUST00000179940 639 ntBASIC2.34□□□□□ -2.03
Cdx2P43241 Mir6905-201ENSMUST00000184228 70 ntBASIC2.34□□□□□ -2.03
Cdx2P43241 Gm43804-201ENSMUST00000198280 456 ntBASIC2.34□□□□□ -2.03
Cdx2P43241 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC2.34□□□□□ -2.03
Cdx2P43241 AC132384.9-201ENSMUST00000218085 277 ntBASIC2.34□□□□□ -2.03
Cdx2P43241 Gm18704-201ENSMUST00000219736 446 ntBASIC2.34□□□□□ -2.03
Cdx2P43241 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Cdx2P43241 Gm23444-201ENSMUST00000082922 191 ntBASIC2.34□□□□□ -2.03
Cdx2P43241 Gm23847-201ENSMUST00000083829 110 ntBASIC2.34□□□□□ -2.03
Cdx2P43241 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Cdx2P43241 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Cdx2P43241 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.33□□□□□ -2.04
Cdx2P43241 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.33□□□□□ -2.04
Cdx2P43241 Mir19b-1-201ENSMUST00000102301 87 ntBASIC2.33□□□□□ -2.04
Cdx2P43241 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Cdx2P43241 Gm23951-201ENSMUST00000104029 132 ntBASIC2.33□□□□□ -2.04
Cdx2P43241 Gm26341-201ENSMUST00000104561 134 ntBASIC2.33□□□□□ -2.04
Cdx2P43241 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
Cdx2P43241 Gm23167-201ENSMUST00000157155 103 ntBASIC2.33□□□□□ -2.04
Cdx2P43241 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.33□□□□□ -2.04
Cdx2P43241 Mir3473a-201ENSMUST00000175011 78 ntBASIC2.33□□□□□ -2.04
Cdx2P43241 Gm26622-201ENSMUST00000180520 298 ntBASIC2.33□□□□□ -2.04
Cdx2P43241 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC2.33□□□□□ -2.04
Cdx2P43241 Gm27608-201ENSMUST00000184822 162 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 96.2 ms