Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC3.76□□□□□ -1.81
Traf1P39428 Gm44964-201ENSMUST00000207011 273 ntBASIC3.76□□□□□ -1.81
Traf1P39428 Gm19137-201ENSMUST00000213790 1164 ntBASIC3.76□□□□□ -1.81
Traf1P39428 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC3.76□□□□□ -1.81
Traf1P39428 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC3.76□□□□□ -1.81
Traf1P39428 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
Traf1P39428 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC3.76□□□□□ -1.81
Traf1P39428 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Traf1P39428 Gm26129-201ENSMUST00000082719 107 ntBASIC3.76□□□□□ -1.81
Traf1P39428 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
Traf1P39428 Mup-ps14-201ENSMUST00000118437 532 ntBASIC3.75□□□□□ -1.81
Traf1P39428 Gm12935-201ENSMUST00000119352 246 ntBASIC3.75□□□□□ -1.81
Traf1P39428 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.75□□□□□ -1.81
Traf1P39428 Gm5646-201ENSMUST00000120568 714 ntBASIC3.75□□□□□ -1.81
Traf1P39428 Gm14578-201ENSMUST00000122166 391 ntBASIC3.75□□□□□ -1.81
Traf1P39428 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC3.75□□□□□ -1.81
Traf1P39428 Mup-ps2-201ENSMUST00000142602 533 ntBASIC3.75□□□□□ -1.81
Traf1P39428 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC3.75□□□□□ -1.81
Traf1P39428 Gm22532-201ENSMUST00000158822 140 ntBASIC3.75□□□□□ -1.81
Traf1P39428 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC3.75□□□□□ -1.81
Traf1P39428 Spanxn4-201ENSMUST00000172433 424 ntBASIC3.75□□□□□ -1.81
Traf1P39428 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC3.75□□□□□ -1.81
Traf1P39428 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC3.75□□□□□ -1.81
Traf1P39428 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC3.75□□□□□ -1.81
Traf1P39428 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC3.75□□□□□ -1.81
Traf1P39428 Gm26988-201ENSMUST00000183296 945 ntBASIC3.75□□□□□ -1.81
Traf1P39428 Gm18486-201ENSMUST00000184040 298 ntBASIC3.75□□□□□ -1.81
Traf1P39428 Gm29259-201ENSMUST00000186396 694 ntBASIC3.75□□□□□ -1.81
Traf1P39428 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC3.75□□□□□ -1.81
Traf1P39428 Gm29576-201ENSMUST00000188020 678 ntBASIC3.75□□□□□ -1.81
Traf1P39428 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
Traf1P39428 Gm28354-201ENSMUST00000190904 678 ntBASIC3.75□□□□□ -1.81
Traf1P39428 Gm19498-201ENSMUST00000191128 331 ntBASIC3.75□□□□□ -1.81
Traf1P39428 Gm38075-201ENSMUST00000191979 920 ntBASIC3.75□□□□□ -1.81
Traf1P39428 Gm43489-201ENSMUST00000196810 993 ntBASIC3.75□□□□□ -1.81
Traf1P39428 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Traf1P39428 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC3.75□□□□□ -1.81
Traf1P39428 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Traf1P39428 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC3.75□□□□□ -1.81
Traf1P39428 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.75□□□□□ -1.81
Traf1P39428 Gm45023-201ENSMUST00000207951 379 ntBASIC3.75□□□□□ -1.81
Traf1P39428 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC3.75□□□□□ -1.81
Traf1P39428 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC3.75□□□□□ -1.81
Traf1P39428 AC153924.1-201ENSMUST00000220117 312 ntBASIC3.75□□□□□ -1.81
Traf1P39428 Gm7753-201ENSMUST00000221007 867 ntBASIC3.75□□□□□ -1.81
Traf1P39428 AC154636.3-201ENSMUST00000221489 1214 ntBASIC3.75□□□□□ -1.81
Traf1P39428 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
Traf1P39428 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.75□□□□□ -1.81
Traf1P39428 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Traf1P39428 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Traf1P39428 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Traf1P39428 AC115047.2-201ENSMUST00000214421 1848 ntBASIC3.74□□□□□ -1.81
Traf1P39428 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Traf1P39428 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Traf1P39428 Gm24119-201ENSMUST00000103979 246 ntBASIC3.74□□□□□ -1.81
Traf1P39428 Gm9043-201ENSMUST00000119677 314 ntBASIC3.74□□□□□ -1.81
Traf1P39428 Gm24914-201ENSMUST00000157285 313 ntBASIC3.74□□□□□ -1.81
Traf1P39428 Gm22143-201ENSMUST00000157401 203 ntBASIC3.74□□□□□ -1.81
Traf1P39428 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Traf1P39428 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC3.74□□□□□ -1.81
Traf1P39428 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC3.74□□□□□ -1.81
Traf1P39428 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC3.74□□□□□ -1.81
Traf1P39428 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC3.74□□□□□ -1.81
Traf1P39428 Gm7870-201ENSMUST00000184467 616 ntBASIC3.74□□□□□ -1.81
Traf1P39428 Gm18956-201ENSMUST00000192857 480 ntBASIC3.74□□□□□ -1.81
Traf1P39428 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.74□□□□□ -1.81
Traf1P39428 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC3.74□□□□□ -1.81
Traf1P39428 Gm44600-201ENSMUST00000208540 111 ntBASIC3.74□□□□□ -1.81
Traf1P39428 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Traf1P39428 Gm45439-201ENSMUST00000211723 359 ntBASIC3.74□□□□□ -1.81
Traf1P39428 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
Traf1P39428 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC3.74□□□□□ -1.81
Traf1P39428 AC154506.3-201ENSMUST00000225417 213 ntBASIC3.74□□□□□ -1.81
Traf1P39428 AC125464.1-201ENSMUST00000228013 512 ntBASIC3.74□□□□□ -1.81
Traf1P39428 n-R5s196-201ENSMUST00000083136 117 ntBASIC3.74□□□□□ -1.81
Traf1P39428 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC3.74□□□□□ -1.81
Traf1P39428 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC3.74□□□□□ -1.81
Traf1P39428 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.74□□□□□ -1.81
Traf1P39428 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.73□□□□□ -1.81
Traf1P39428 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Traf1P39428 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Traf1P39428 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
Traf1P39428 Gm14987-201ENSMUST00000117820 676 ntBASIC3.73□□□□□ -1.81
Traf1P39428 Gm14647-201ENSMUST00000119392 680 ntBASIC3.73□□□□□ -1.81
Traf1P39428 Gm12412-201ENSMUST00000121867 328 ntBASIC3.73□□□□□ -1.81
Traf1P39428 Gm25902-201ENSMUST00000158493 318 ntBASIC3.73□□□□□ -1.81
Traf1P39428 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Traf1P39428 Gm29600-201ENSMUST00000188687 377 ntBASIC3.73□□□□□ -1.81
Traf1P39428 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC3.73□□□□□ -1.81
Traf1P39428 Ighv1-28-201ENSMUST00000192987 351 ntBASIC3.73□□□□□ -1.81
Traf1P39428 Gm37523-201ENSMUST00000194901 412 ntBASIC3.73□□□□□ -1.81
Traf1P39428 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC3.73□□□□□ -1.81
Traf1P39428 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Traf1P39428 Gm44594-201ENSMUST00000208982 407 ntBASIC3.73□□□□□ -1.81
Traf1P39428 Gm2446-201ENSMUST00000220144 772 ntBASIC3.73□□□□□ -1.81
Traf1P39428 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC3.73□□□□□ -1.81
Traf1P39428 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Traf1P39428 Gm25008-201ENSMUST00000083809 81 ntBASIC3.73□□□□□ -1.81
Traf1P39428 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Traf1P39428 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 150.9 ms