Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Gm4036-201ENSMUST00000220842 626 ntBASIC3.72□□□□□ -1.81
Hoxc11P31313 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC3.72□□□□□ -1.81
Hoxc11P31313 AC129202.3-201ENSMUST00000224413 733 ntBASIC3.72□□□□□ -1.81
Hoxc11P31313 Gm26055-201ENSMUST00000083038 107 ntBASIC3.72□□□□□ -1.81
Hoxc11P31313 Gm23645-201ENSMUST00000083228 108 ntBASIC3.72□□□□□ -1.81
Hoxc11P31313 Mir21a-201ENSMUST00000083521 92 ntBASIC3.72□□□□□ -1.81
Hoxc11P31313 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Hoxc11P31313 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Hoxc11P31313 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC3.72□□□□□ -1.81
Hoxc11P31313 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Hoxc11P31313 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.72□□□□□ -1.81
Hoxc11P31313 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Hoxc11P31313 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
Hoxc11P31313 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
Hoxc11P31313 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
Hoxc11P31313 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC3.71□□□□□ -1.82
Hoxc11P31313 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Hoxc11P31313 Gm25765-201ENSMUST00000104100 132 ntBASIC3.71□□□□□ -1.82
Hoxc11P31313 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Hoxc11P31313 Gm11576-201ENSMUST00000117433 417 ntBASIC3.71□□□□□ -1.82
Hoxc11P31313 Gm15799-201ENSMUST00000120899 289 ntBASIC3.71□□□□□ -1.82
Hoxc11P31313 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Hoxc11P31313 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC3.71□□□□□ -1.82
Hoxc11P31313 Gm23981-201ENSMUST00000157136 106 ntBASIC3.71□□□□□ -1.82
Hoxc11P31313 Gm25621-201ENSMUST00000157223 114 ntBASIC3.71□□□□□ -1.82
Hoxc11P31313 Gm22849-201ENSMUST00000157713 307 ntBASIC3.71□□□□□ -1.82
Hoxc11P31313 Gm25436-201ENSMUST00000158275 145 ntBASIC3.71□□□□□ -1.82
Hoxc11P31313 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC3.71□□□□□ -1.82
Hoxc11P31313 Gm24713-201ENSMUST00000178850 107 ntBASIC3.71□□□□□ -1.82
Hoxc11P31313 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Hoxc11P31313 Gm23379-201ENSMUST00000180026 107 ntBASIC3.71□□□□□ -1.82
Hoxc11P31313 Gm25448-201ENSMUST00000180065 107 ntBASIC3.71□□□□□ -1.82
Hoxc11P31313 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Hoxc11P31313 Gm28163-201ENSMUST00000187099 325 ntBASIC3.71□□□□□ -1.82
Hoxc11P31313 Gm18775-201ENSMUST00000190763 586 ntBASIC3.71□□□□□ -1.82
Hoxc11P31313 Trbv22-201ENSMUST00000191697 291 ntBASIC3.71□□□□□ -1.82
Hoxc11P31313 Gm37239-201ENSMUST00000193510 141 ntBASIC3.71□□□□□ -1.82
Hoxc11P31313 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC3.71□□□□□ -1.82
Hoxc11P31313 Gm43804-201ENSMUST00000198280 456 ntBASIC3.71□□□□□ -1.82
Hoxc11P31313 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Hoxc11P31313 Gm4921-201ENSMUST00000219804 992 ntBASIC3.71□□□□□ -1.82
Hoxc11P31313 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC3.71□□□□□ -1.82
Hoxc11P31313 Gm3829-201ENSMUST00000222362 619 ntBASIC3.71□□□□□ -1.82
Hoxc11P31313 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.71□□□□□ -1.82
Hoxc11P31313 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.71□□□□□ -1.82
Hoxc11P31313 AC123656.2-201ENSMUST00000226726 227 ntBASIC3.71□□□□□ -1.82
Hoxc11P31313 AC122341.1-201ENSMUST00000227291 560 ntBASIC3.71□□□□□ -1.82
Hoxc11P31313 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Hoxc11P31313 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Hoxc11P31313 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
Hoxc11P31313 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC3.7□□□□□ -1.82
Hoxc11P31313 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Hoxc11P31313 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
Hoxc11P31313 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
Hoxc11P31313 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Hoxc11P31313 Gm15783-201ENSMUST00000117521 633 ntBASIC3.7□□□□□ -1.82
Hoxc11P31313 Gm11718-201ENSMUST00000119942 537 ntBASIC3.7□□□□□ -1.82
Hoxc11P31313 Gm11876-201ENSMUST00000120002 269 ntBASIC3.7□□□□□ -1.82
Hoxc11P31313 Gm15014-201ENSMUST00000120742 258 ntBASIC3.7□□□□□ -1.82
Hoxc11P31313 Gm12900-201ENSMUST00000120919 573 ntBASIC3.7□□□□□ -1.82
Hoxc11P31313 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC3.7□□□□□ -1.82
Hoxc11P31313 Gm22793-201ENSMUST00000157227 330 ntBASIC3.7□□□□□ -1.82
Hoxc11P31313 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Hoxc11P31313 Gm26195-201ENSMUST00000175035 101 ntBASIC3.7□□□□□ -1.82
Hoxc11P31313 Gm27919-201ENSMUST00000185163 107 ntBASIC3.7□□□□□ -1.82
Hoxc11P31313 Gm18296-201ENSMUST00000192475 783 ntBASIC3.7□□□□□ -1.82
Hoxc11P31313 Gm37343-201ENSMUST00000192542 111 ntBASIC3.7□□□□□ -1.82
Hoxc11P31313 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC3.7□□□□□ -1.82
Hoxc11P31313 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Hoxc11P31313 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Hoxc11P31313 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC3.7□□□□□ -1.82
Hoxc11P31313 AC125379.1-201ENSMUST00000221928 111 ntBASIC3.7□□□□□ -1.82
Hoxc11P31313 AC173482.2-201ENSMUST00000224044 750 ntBASIC3.7□□□□□ -1.82
Hoxc11P31313 AL672194.1-201ENSMUST00000224841 603 ntBASIC3.7□□□□□ -1.82
Hoxc11P31313 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Hoxc11P31313 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Hoxc11P31313 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Hoxc11P31313 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Hoxc11P31313 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Hoxc11P31313 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Hoxc11P31313 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Hoxc11P31313 Gm14657-201ENSMUST00000117461 302 ntBASIC3.69□□□□□ -1.82
Hoxc11P31313 Gm14868-201ENSMUST00000117840 216 ntBASIC3.69□□□□□ -1.82
Hoxc11P31313 Gm14119-201ENSMUST00000119511 235 ntBASIC3.69□□□□□ -1.82
Hoxc11P31313 Gm22480-201ENSMUST00000122568 128 ntBASIC3.69□□□□□ -1.82
Hoxc11P31313 Gm23206-201ENSMUST00000122720 184 ntBASIC3.69□□□□□ -1.82
Hoxc11P31313 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC3.69□□□□□ -1.82
Hoxc11P31313 Gm22555-201ENSMUST00000157801 62 ntBASIC3.69□□□□□ -1.82
Hoxc11P31313 Gm23078-201ENSMUST00000157848 148 ntBASIC3.69□□□□□ -1.82
Hoxc11P31313 Gm22521-201ENSMUST00000158272 134 ntBASIC3.69□□□□□ -1.82
Hoxc11P31313 Gm25902-201ENSMUST00000158493 318 ntBASIC3.69□□□□□ -1.82
Hoxc11P31313 Gm23022-201ENSMUST00000158768 180 ntBASIC3.69□□□□□ -1.82
Hoxc11P31313 Gm22290-201ENSMUST00000177655 107 ntBASIC3.69□□□□□ -1.82
Hoxc11P31313 Gm6625-201ENSMUST00000177870 272 ntBASIC3.69□□□□□ -1.82
Hoxc11P31313 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.69□□□□□ -1.82
Hoxc11P31313 Gm22583-201ENSMUST00000178031 107 ntBASIC3.69□□□□□ -1.82
Hoxc11P31313 Gm21758-201ENSMUST00000179336 819 ntBASIC3.69□□□□□ -1.82
Hoxc11P31313 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.69□□□□□ -1.82
Hoxc11P31313 Gm8816-201ENSMUST00000182280 1163 ntBASIC3.69□□□□□ -1.82
Hoxc11P31313 Mir7676-1-201ENSMUST00000183491 62 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms