Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC5.13□□□□□ -1.59
Msx1P13297 Gm23327-201ENSMUST00000157420 78 ntBASIC5.13□□□□□ -1.59
Msx1P13297 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Msx1P13297 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC5.13□□□□□ -1.59
Msx1P13297 Mir6335-201ENSMUST00000184081 98 ntBASIC5.13□□□□□ -1.59
Msx1P13297 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC5.13□□□□□ -1.59
Msx1P13297 Gm28623-201ENSMUST00000187219 192 ntBASIC5.13□□□□□ -1.59
Msx1P13297 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Msx1P13297 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC5.13□□□□□ -1.59
Msx1P13297 Gm44319-201ENSMUST00000196974 93 ntBASIC5.13□□□□□ -1.59
Msx1P13297 Mir1a-2-201ENSMUST00000198520 72 ntBASIC5.13□□□□□ -1.59
Msx1P13297 AC123803.1-201ENSMUST00000216093 189 ntBASIC5.13□□□□□ -1.59
Msx1P13297 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC5.13□□□□□ -1.59
Msx1P13297 AC238676.3-201ENSMUST00000223042 154 ntBASIC5.13□□□□□ -1.59
Msx1P13297 CT010506.3-201ENSMUST00000223699 410 ntBASIC5.13□□□□□ -1.59
Msx1P13297 AC098718.2-201ENSMUST00000226822 285 ntBASIC5.13□□□□□ -1.59
Msx1P13297 AC154276.2-201ENSMUST00000227707 309 ntBASIC5.13□□□□□ -1.59
Msx1P13297 Gm9818-201ENSMUST00000050900 255 ntBASIC5.13□□□□□ -1.59
Msx1P13297 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC5.13□□□□□ -1.59
Msx1P13297 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Msx1P13297 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
Msx1P13297 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC5.13□□□□□ -1.59
Msx1P13297 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
Msx1P13297 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Msx1P13297 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Msx1P13297 Gm45066-201ENSMUST00000207528 2551 ntBASIC5.12□□□□□ -1.59
Msx1P13297 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Msx1P13297 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Msx1P13297 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Msx1P13297 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Msx1P13297 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
Msx1P13297 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Msx1P13297 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Msx1P13297 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Msx1P13297 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC5.12□□□□□ -1.59
Msx1P13297 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Msx1P13297 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Msx1P13297 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Msx1P13297 Gm11325-201ENSMUST00000119967 469 ntBASIC5.12□□□□□ -1.59
Msx1P13297 Gm15803-201ENSMUST00000120118 394 ntBASIC5.12□□□□□ -1.59
Msx1P13297 Gm23466-201ENSMUST00000157133 106 ntBASIC5.12□□□□□ -1.59
Msx1P13297 Gm7609-204ENSMUST00000161424 461 ntBASIC5.12□□□□□ -1.59
Msx1P13297 Gm28683-201ENSMUST00000187134 615 ntBASIC5.12□□□□□ -1.59
Msx1P13297 Gm28840-205ENSMUST00000189320 615 ntBASIC5.12□□□□□ -1.59
Msx1P13297 Gm28835-203ENSMUST00000190062 615 ntBASIC5.12□□□□□ -1.59
Msx1P13297 Gm29218-205ENSMUST00000190846 615 ntBASIC5.12□□□□□ -1.59
Msx1P13297 Igkv15-101-201ENSMUST00000195917 299 ntBASIC5.12□□□□□ -1.59
Msx1P13297 Gm42830-201ENSMUST00000196642 313 ntBASIC5.12□□□□□ -1.59
Msx1P13297 Gm44463-201ENSMUST00000198895 137 ntBASIC5.12□□□□□ -1.59
Msx1P13297 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC5.12□□□□□ -1.59
Msx1P13297 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC5.12□□□□□ -1.59
Msx1P13297 Gm45498-201ENSMUST00000210346 283 ntBASIC5.12□□□□□ -1.59
Msx1P13297 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC5.12□□□□□ -1.59
Msx1P13297 AC168880.2-201ENSMUST00000224488 201 ntBASIC5.12□□□□□ -1.59
Msx1P13297 AC123533.1-201ENSMUST00000227782 446 ntBASIC5.12□□□□□ -1.59
Msx1P13297 Gm22807-201ENSMUST00000082737 129 ntBASIC5.12□□□□□ -1.59
Msx1P13297 Gm25814-201ENSMUST00000082754 107 ntBASIC5.12□□□□□ -1.59
Msx1P13297 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Msx1P13297 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Msx1P13297 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
Msx1P13297 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
Msx1P13297 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Msx1P13297 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Msx1P13297 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Msx1P13297 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Msx1P13297 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC5.12□□□□□ -1.59
Msx1P13297 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Msx1P13297 Gm42681-201ENSMUST00000197999 1611 ntBASIC5.12□□□□□ -1.59
Msx1P13297 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Msx1P13297 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.12□□□□□ -1.59
Msx1P13297 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Msx1P13297 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Msx1P13297 Gm27047-201ENSMUST00000183072 1819 ntBASIC5.11□□□□□ -1.59
Msx1P13297 Gm43175-201ENSMUST00000198450 3810 ntBASIC5.11□□□□□ -1.59
Msx1P13297 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC5.11□□□□□ -1.59
Msx1P13297 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Msx1P13297 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Msx1P13297 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Msx1P13297 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
Msx1P13297 Gm17752-201ENSMUST00000185787 3726 ntBASIC5.11□□□□□ -1.59
Msx1P13297 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Msx1P13297 Gm24578-201ENSMUST00000103970 129 ntBASIC5.11□□□□□ -1.59
Msx1P13297 Gm24172-201ENSMUST00000104127 117 ntBASIC5.11□□□□□ -1.59
Msx1P13297 Gm13504-201ENSMUST00000117490 316 ntBASIC5.11□□□□□ -1.59
Msx1P13297 Gm11825-201ENSMUST00000120710 736 ntBASIC5.11□□□□□ -1.59
Msx1P13297 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Msx1P13297 Gm25283-201ENSMUST00000157272 77 ntBASIC5.11□□□□□ -1.59
Msx1P13297 Gm23044-201ENSMUST00000157891 100 ntBASIC5.11□□□□□ -1.59
Msx1P13297 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Msx1P13297 Gm37796-201ENSMUST00000195327 134 ntBASIC5.11□□□□□ -1.59
Msx1P13297 Gm42526-201ENSMUST00000198956 393 ntBASIC5.11□□□□□ -1.59
Msx1P13297 Snord80-202ENSMUST00000199023 77 ntBASIC5.11□□□□□ -1.59
Msx1P13297 Gm45907-201ENSMUST00000213023 193 ntBASIC5.11□□□□□ -1.59
Msx1P13297 AC155922.1-201ENSMUST00000220100 373 ntBASIC5.11□□□□□ -1.59
Msx1P13297 AC165347.1-201ENSMUST00000224089 1025 ntBASIC5.11□□□□□ -1.59
Msx1P13297 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Msx1P13297 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Msx1P13297 Gm24616-201ENSMUST00000083274 139 ntBASIC5.11□□□□□ -1.59
Msx1P13297 Gm13477-201ENSMUST00000121620 2687 ntBASIC5.11□□□□□ -1.59
Msx1P13297 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms