Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC5.03□□□□□ -1.6
RaraP11416 Gm15783-201ENSMUST00000117521 633 ntBASIC5.03□□□□□ -1.6
RaraP11416 Gm8145-201ENSMUST00000118220 745 ntBASIC5.03□□□□□ -1.6
RaraP11416 Gm15553-201ENSMUST00000118757 430 ntBASIC5.03□□□□□ -1.6
RaraP11416 Gm11325-201ENSMUST00000119967 469 ntBASIC5.03□□□□□ -1.6
RaraP11416 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC5.03□□□□□ -1.6
RaraP11416 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC5.03□□□□□ -1.6
RaraP11416 Gm22538-201ENSMUST00000158169 299 ntBASIC5.03□□□□□ -1.6
RaraP11416 Gm26318-201ENSMUST00000176507 96 ntBASIC5.03□□□□□ -1.6
RaraP11416 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC5.03□□□□□ -1.6
RaraP11416 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC5.03□□□□□ -1.6
RaraP11416 Gm24520-201ENSMUST00000179510 110 ntBASIC5.03□□□□□ -1.6
RaraP11416 Gm21991-201ENSMUST00000180006 508 ntBASIC5.03□□□□□ -1.6
RaraP11416 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC5.03□□□□□ -1.6
RaraP11416 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC5.03□□□□□ -1.6
RaraP11416 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC5.03□□□□□ -1.6
RaraP11416 Gm38183-201ENSMUST00000193189 205 ntBASIC5.03□□□□□ -1.6
RaraP11416 Gm18453-201ENSMUST00000208000 626 ntBASIC5.03□□□□□ -1.6
RaraP11416 Gm45327-201ENSMUST00000211612 565 ntBASIC5.03□□□□□ -1.6
RaraP11416 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC5.03□□□□□ -1.6
RaraP11416 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC5.03□□□□□ -1.6
RaraP11416 AC139750.2-201ENSMUST00000224424 386 ntBASIC5.03□□□□□ -1.6
RaraP11416 CT025525.4-201ENSMUST00000227728 277 ntBASIC5.03□□□□□ -1.6
RaraP11416 n-R5s173-201ENSMUST00000082620 119 ntBASIC5.03□□□□□ -1.6
RaraP11416 Gm26497-201ENSMUST00000083146 107 ntBASIC5.03□□□□□ -1.6
RaraP11416 Gm8074-201ENSMUST00000095071 252 ntBASIC5.03□□□□□ -1.6
RaraP11416 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
RaraP11416 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
RaraP11416 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
RaraP11416 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
RaraP11416 Gm37964-201ENSMUST00000192459 4905 ntBASIC5.02□□□□□ -1.61
RaraP11416 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
RaraP11416 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
RaraP11416 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RaraP11416 AC112142.1-203ENSMUST00000228670 2472 ntBASIC5.02□□□□□ -1.61
RaraP11416 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
RaraP11416 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
RaraP11416 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
RaraP11416 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RaraP11416 Gm37393-201ENSMUST00000195118 3870 ntBASIC5.02□□□□□ -1.61
RaraP11416 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
RaraP11416 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
RaraP11416 Gm14880-201ENSMUST00000117581 292 ntBASIC5.02□□□□□ -1.61
RaraP11416 Gm14627-201ENSMUST00000118931 567 ntBASIC5.02□□□□□ -1.61
RaraP11416 Gm13967-201ENSMUST00000120404 380 ntBASIC5.02□□□□□ -1.61
RaraP11416 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC5.02□□□□□ -1.61
RaraP11416 Gm25103-201ENSMUST00000122671 318 ntBASIC5.02□□□□□ -1.61
RaraP11416 Gm25106-201ENSMUST00000122672 134 ntBASIC5.02□□□□□ -1.61
RaraP11416 Gm13901-201ENSMUST00000137252 468 ntBASIC5.02□□□□□ -1.61
RaraP11416 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC5.02□□□□□ -1.61
RaraP11416 Gm26153-201ENSMUST00000157433 127 ntBASIC5.02□□□□□ -1.61
RaraP11416 Gm24636-201ENSMUST00000158673 288 ntBASIC5.02□□□□□ -1.61
RaraP11416 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RaraP11416 Gm26501-201ENSMUST00000178307 107 ntBASIC5.02□□□□□ -1.61
RaraP11416 Gm27543-201ENSMUST00000183562 177 ntBASIC5.02□□□□□ -1.61
RaraP11416 Gm29062-201ENSMUST00000186032 694 ntBASIC5.02□□□□□ -1.61
RaraP11416 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC5.02□□□□□ -1.61
RaraP11416 Gm37636-201ENSMUST00000193583 359 ntBASIC5.02□□□□□ -1.61
RaraP11416 Gm8069-201ENSMUST00000197887 154 ntBASIC5.02□□□□□ -1.61
RaraP11416 AC133189.1-201ENSMUST00000198820 140 ntBASIC5.02□□□□□ -1.61
RaraP11416 Gm20039-201ENSMUST00000210329 394 ntBASIC5.02□□□□□ -1.61
RaraP11416 AC158622.1-201ENSMUST00000217107 230 ntBASIC5.02□□□□□ -1.61
RaraP11416 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC5.02□□□□□ -1.61
RaraP11416 n-R5s152-201ENSMUST00000093641 119 ntBASIC5.02□□□□□ -1.61
RaraP11416 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RaraP11416 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
RaraP11416 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
RaraP11416 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
RaraP11416 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
RaraP11416 AC152981.1-201ENSMUST00000218320 2480 ntBASIC5.02□□□□□ -1.61
RaraP11416 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RaraP11416 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC5.01□□□□□ -1.61
RaraP11416 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
RaraP11416 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
RaraP11416 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
RaraP11416 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RaraP11416 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RaraP11416 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
RaraP11416 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
RaraP11416 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
RaraP11416 Mir690-201ENSMUST00000102110 109 ntBASIC5.01□□□□□ -1.61
RaraP11416 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
RaraP11416 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
RaraP11416 Gm12062-201ENSMUST00000117533 259 ntBASIC5.01□□□□□ -1.61
RaraP11416 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC5.01□□□□□ -1.61
RaraP11416 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC5.01□□□□□ -1.61
RaraP11416 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC5.01□□□□□ -1.61
RaraP11416 Gm23496-201ENSMUST00000157741 248 ntBASIC5.01□□□□□ -1.61
RaraP11416 Gm26312-201ENSMUST00000157769 165 ntBASIC5.01□□□□□ -1.61
RaraP11416 Gm23759-201ENSMUST00000158351 268 ntBASIC5.01□□□□□ -1.61
RaraP11416 Gm16114-201ENSMUST00000161930 300 ntBASIC5.01□□□□□ -1.61
RaraP11416 Gm17072-201ENSMUST00000166673 658 ntBASIC5.01□□□□□ -1.61
RaraP11416 Gm7335-201ENSMUST00000172475 373 ntBASIC5.01□□□□□ -1.61
RaraP11416 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC5.01□□□□□ -1.61
RaraP11416 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC5.01□□□□□ -1.61
RaraP11416 Gm28288-201ENSMUST00000191019 214 ntBASIC5.01□□□□□ -1.61
RaraP11416 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC5.01□□□□□ -1.61
RaraP11416 Gm45731-201ENSMUST00000211988 1203 ntBASIC5.01□□□□□ -1.61
RaraP11416 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
RaraP11416 AC124772.1-201ENSMUST00000221325 151 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms