Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Lire1P11260 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Lire1P11260 Gm24376-201ENSMUST00000104399 127 ntBASIC3.33□□□□□ -1.88
Lire1P11260 Gm22497-201ENSMUST00000104499 131 ntBASIC3.33□□□□□ -1.88
Lire1P11260 Gm22072-201ENSMUST00000116850 121 ntBASIC3.33□□□□□ -1.88
Lire1P11260 Gm14989-201ENSMUST00000120497 207 ntBASIC3.33□□□□□ -1.88
Lire1P11260 Gm12858-201ENSMUST00000121913 208 ntBASIC3.33□□□□□ -1.88
Lire1P11260 Gm12238-201ENSMUST00000127764 124 ntBASIC3.33□□□□□ -1.88
Lire1P11260 Gm14651-201ENSMUST00000147192 442 ntBASIC3.33□□□□□ -1.88
Lire1P11260 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Lire1P11260 Gm23326-201ENSMUST00000157419 105 ntBASIC3.33□□□□□ -1.88
Lire1P11260 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC3.33□□□□□ -1.88
Lire1P11260 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.33□□□□□ -1.88
Lire1P11260 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC3.33□□□□□ -1.88
Lire1P11260 Gm45049-201ENSMUST00000207586 591 ntBASIC3.33□□□□□ -1.88
Lire1P11260 Gm45696-201ENSMUST00000212088 985 ntBASIC3.33□□□□□ -1.88
Lire1P11260 CT573422.1-201ENSMUST00000216655 405 ntBASIC3.33□□□□□ -1.88
Lire1P11260 AC122194.1-201ENSMUST00000220549 293 ntBASIC3.33□□□□□ -1.88
Lire1P11260 AC120540.1-201ENSMUST00000221879 324 ntBASIC3.33□□□□□ -1.88
Lire1P11260 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Lire1P11260 Gm26203-201ENSMUST00000082911 114 ntBASIC3.33□□□□□ -1.88
Lire1P11260 Gm7905-201ENSMUST00000119933 1386 ntBASIC3.33□□□□□ -1.88
Lire1P11260 Gm6221-201ENSMUST00000180064 1386 ntBASIC3.33□□□□□ -1.88
Lire1P11260 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Lire1P11260 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC3.32□□□□□ -1.88
Lire1P11260 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Lire1P11260 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Lire1P11260 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Lire1P11260 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
Lire1P11260 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
Lire1P11260 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Lire1P11260 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Lire1P11260 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Lire1P11260 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC3.32□□□□□ -1.88
Lire1P11260 Gm16216-201ENSMUST00000118970 1111 ntBASIC3.32□□□□□ -1.88
Lire1P11260 Gm13627-201ENSMUST00000119700 706 ntBASIC3.32□□□□□ -1.88
Lire1P11260 Gm25945-201ENSMUST00000122484 135 ntBASIC3.32□□□□□ -1.88
Lire1P11260 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.32□□□□□ -1.88
Lire1P11260 Gm17164-201ENSMUST00000169013 506 ntBASIC3.32□□□□□ -1.88
Lire1P11260 Gm25535-201ENSMUST00000175364 125 ntBASIC3.32□□□□□ -1.88
Lire1P11260 Gm26556-201ENSMUST00000180645 320 ntBASIC3.32□□□□□ -1.88
Lire1P11260 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC3.32□□□□□ -1.88
Lire1P11260 Mir8118-201ENSMUST00000183962 129 ntBASIC3.32□□□□□ -1.88
Lire1P11260 Gm27428-201ENSMUST00000184289 110 ntBASIC3.32□□□□□ -1.88
Lire1P11260 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Lire1P11260 Gm29597-201ENSMUST00000188035 308 ntBASIC3.32□□□□□ -1.88
Lire1P11260 Gm6801-201ENSMUST00000190697 339 ntBASIC3.32□□□□□ -1.88
Lire1P11260 Gm38214-201ENSMUST00000192581 988 ntBASIC3.32□□□□□ -1.88
Lire1P11260 Gm37692-201ENSMUST00000192633 232 ntBASIC3.32□□□□□ -1.88
Lire1P11260 Gm37993-201ENSMUST00000195301 988 ntBASIC3.32□□□□□ -1.88
Lire1P11260 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC3.32□□□□□ -1.88
Lire1P11260 Gm45288-201ENSMUST00000210236 151 ntBASIC3.32□□□□□ -1.88
Lire1P11260 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.32□□□□□ -1.88
Lire1P11260 AC101984.1-201ENSMUST00000219639 402 ntBASIC3.32□□□□□ -1.88
Lire1P11260 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC3.32□□□□□ -1.88
Lire1P11260 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Lire1P11260 Gm24610-201ENSMUST00000083270 109 ntBASIC3.32□□□□□ -1.88
Lire1P11260 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC3.32□□□□□ -1.88
Lire1P11260 Gm29730-201ENSMUST00000192986 1396 ntBASIC3.32□□□□□ -1.88
Lire1P11260 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.32□□□□□ -1.88
Lire1P11260 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Lire1P11260 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
Lire1P11260 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Lire1P11260 Gm22115-201ENSMUST00000103976 133 ntBASIC3.31□□□□□ -1.88
Lire1P11260 Gm23923-201ENSMUST00000104108 133 ntBASIC3.31□□□□□ -1.88
Lire1P11260 Gm24340-201ENSMUST00000104208 97 ntBASIC3.31□□□□□ -1.88
Lire1P11260 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Lire1P11260 Gm14775-201ENSMUST00000122089 310 ntBASIC3.31□□□□□ -1.88
Lire1P11260 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC3.31□□□□□ -1.88
Lire1P11260 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC3.31□□□□□ -1.88
Lire1P11260 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Lire1P11260 Mir1934-201ENSMUST00000158127 83 ntBASIC3.31□□□□□ -1.88
Lire1P11260 Gm26195-201ENSMUST00000175035 101 ntBASIC3.31□□□□□ -1.88
Lire1P11260 Gm25476-201ENSMUST00000175125 185 ntBASIC3.31□□□□□ -1.88
Lire1P11260 Gm20648-201ENSMUST00000175815 328 ntBASIC3.31□□□□□ -1.88
Lire1P11260 Gm24754-201ENSMUST00000177997 107 ntBASIC3.31□□□□□ -1.88
Lire1P11260 Gm6900-201ENSMUST00000178971 342 ntBASIC3.31□□□□□ -1.88
Lire1P11260 Gm8392-201ENSMUST00000185647 835 ntBASIC3.31□□□□□ -1.88
Lire1P11260 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC3.31□□□□□ -1.88
Lire1P11260 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Lire1P11260 Ighv1-28-201ENSMUST00000192987 351 ntBASIC3.31□□□□□ -1.88
Lire1P11260 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.31□□□□□ -1.88
Lire1P11260 Gm42958-201ENSMUST00000197595 318 ntBASIC3.31□□□□□ -1.88
Lire1P11260 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC3.31□□□□□ -1.88
Lire1P11260 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC3.31□□□□□ -1.88
Lire1P11260 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Lire1P11260 Gm44824-201ENSMUST00000207021 229 ntBASIC3.31□□□□□ -1.88
Lire1P11260 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC3.31□□□□□ -1.88
Lire1P11260 AC147628.1-201ENSMUST00000228193 688 ntBASIC3.31□□□□□ -1.88
Lire1P11260 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Lire1P11260 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Lire1P11260 AC154481.2-201ENSMUST00000222526 3175 ntBASIC3.31□□□□□ -1.88
Lire1P11260 AC125223.3-201ENSMUST00000223588 2067 ntBASIC3.31□□□□□ -1.88
Lire1P11260 Gm8473-201ENSMUST00000176697 1885 ntBASIC3.3□□□□□ -1.88
Lire1P11260 Gm44120-201ENSMUST00000203022 3023 ntBASIC3.3□□□□□ -1.88
Lire1P11260 Gm38162-201ENSMUST00000195562 4597 ntBASIC3.3□□□□□ -1.88
Lire1P11260 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Lire1P11260 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Lire1P11260 Gm25526-201ENSMUST00000104332 132 ntBASIC3.3□□□□□ -1.88
Lire1P11260 Gm23532-201ENSMUST00000104569 112 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms