Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 AC115291.1-201ENSMUST00000226803 258 ntBASIC3.74□□□□□ -1.81
Col3a1P08121 AC107369.1-201ENSMUST00000227373 860 ntBASIC3.74□□□□□ -1.81
Col3a1P08121 Gm25578-201ENSMUST00000083406 104 ntBASIC3.74□□□□□ -1.81
Col3a1P08121 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
Col3a1P08121 Mir465c-1-201ENSMUST00000093560 81 ntBASIC3.74□□□□□ -1.81
Col3a1P08121 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Col3a1P08121 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Col3a1P08121 Gm37970-201ENSMUST00000193865 1732 ntBASIC3.74□□□□□ -1.81
Col3a1P08121 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Col3a1P08121 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Col3a1P08121 Gm37661-201ENSMUST00000191863 1550 ntBASIC3.74□□□□□ -1.81
Col3a1P08121 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Col3a1P08121 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Col3a1P08121 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Col3a1P08121 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Col3a1P08121 Gm22591-201ENSMUST00000104243 106 ntBASIC3.73□□□□□ -1.81
Col3a1P08121 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC3.73□□□□□ -1.81
Col3a1P08121 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
Col3a1P08121 Gm15108-201ENSMUST00000116160 803 ntBASIC3.73□□□□□ -1.81
Col3a1P08121 Gm11859-201ENSMUST00000118099 455 ntBASIC3.73□□□□□ -1.81
Col3a1P08121 Gm13471-201ENSMUST00000122057 433 ntBASIC3.73□□□□□ -1.81
Col3a1P08121 Gm11254-201ENSMUST00000122368 653 ntBASIC3.73□□□□□ -1.81
Col3a1P08121 Gm17919-201ENSMUST00000173344 312 ntBASIC3.73□□□□□ -1.81
Col3a1P08121 Mir3965-201ENSMUST00000175570 69 ntBASIC3.73□□□□□ -1.81
Col3a1P08121 Gm27522-201ENSMUST00000183949 230 ntBASIC3.73□□□□□ -1.81
Col3a1P08121 Gm28002-201ENSMUST00000184832 100 ntBASIC3.73□□□□□ -1.81
Col3a1P08121 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC3.73□□□□□ -1.81
Col3a1P08121 Gm38075-201ENSMUST00000191979 920 ntBASIC3.73□□□□□ -1.81
Col3a1P08121 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC3.73□□□□□ -1.81
Col3a1P08121 Gm2077-201ENSMUST00000195017 319 ntBASIC3.73□□□□□ -1.81
Col3a1P08121 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC3.73□□□□□ -1.81
Col3a1P08121 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC3.73□□□□□ -1.81
Col3a1P08121 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.73□□□□□ -1.81
Col3a1P08121 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC3.73□□□□□ -1.81
Col3a1P08121 Gm5176-202ENSMUST00000220267 583 ntBASIC3.73□□□□□ -1.81
Col3a1P08121 AC140451.2-202ENSMUST00000226156 574 ntBASIC3.73□□□□□ -1.81
Col3a1P08121 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Col3a1P08121 Gm7984-201ENSMUST00000060640 538 ntBASIC3.73□□□□□ -1.81
Col3a1P08121 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC3.73□□□□□ -1.81
Col3a1P08121 Gm37761-201ENSMUST00000194989 2098 ntBASIC3.73□□□□□ -1.81
Col3a1P08121 Gm37789-201ENSMUST00000192862 2889 ntBASIC3.73□□□□□ -1.81
Col3a1P08121 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Col3a1P08121 Gm37311-201ENSMUST00000195541 2024 ntBASIC3.73□□□□□ -1.81
Col3a1P08121 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
Col3a1P08121 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
Col3a1P08121 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
Col3a1P08121 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Col3a1P08121 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Col3a1P08121 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC3.73□□□□□ -1.81
Col3a1P08121 Gm22750-201ENSMUST00000102076 103 ntBASIC3.73□□□□□ -1.81
Col3a1P08121 Mir669i-201ENSMUST00000117007 127 ntBASIC3.73□□□□□ -1.81
Col3a1P08121 Gm12102-201ENSMUST00000118251 604 ntBASIC3.73□□□□□ -1.81
Col3a1P08121 Gm9078-201ENSMUST00000119126 617 ntBASIC3.73□□□□□ -1.81
Col3a1P08121 Gm15193-201ENSMUST00000120224 865 ntBASIC3.73□□□□□ -1.81
Col3a1P08121 Gm14600-201ENSMUST00000121032 630 ntBASIC3.73□□□□□ -1.81
Col3a1P08121 Gm14768-201ENSMUST00000122126 678 ntBASIC3.73□□□□□ -1.81
Col3a1P08121 Gm22199-201ENSMUST00000122660 126 ntBASIC3.73□□□□□ -1.81
Col3a1P08121 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC3.73□□□□□ -1.81
Col3a1P08121 Gm24438-201ENSMUST00000157893 115 ntBASIC3.73□□□□□ -1.81
Col3a1P08121 Gm26335-201ENSMUST00000178449 107 ntBASIC3.73□□□□□ -1.81
Col3a1P08121 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC3.73□□□□□ -1.81
Col3a1P08121 Gm24969-201ENSMUST00000180331 79 ntBASIC3.73□□□□□ -1.81
Col3a1P08121 Mir6341-201ENSMUST00000183490 121 ntBASIC3.73□□□□□ -1.81
Col3a1P08121 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Col3a1P08121 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Col3a1P08121 Gm28700-201ENSMUST00000187614 579 ntBASIC3.73□□□□□ -1.81
Col3a1P08121 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC3.73□□□□□ -1.81
Col3a1P08121 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC3.73□□□□□ -1.81
Col3a1P08121 Gm29848-201ENSMUST00000203107 295 ntBASIC3.73□□□□□ -1.81
Col3a1P08121 Gm7039-201ENSMUST00000205138 346 ntBASIC3.73□□□□□ -1.81
Col3a1P08121 Gm18557-201ENSMUST00000218710 433 ntBASIC3.73□□□□□ -1.81
Col3a1P08121 AC160114.1-201ENSMUST00000221930 365 ntBASIC3.73□□□□□ -1.81
Col3a1P08121 CT025602.1-201ENSMUST00000227281 382 ntBASIC3.73□□□□□ -1.81
Col3a1P08121 Olfr197-201ENSMUST00000080031 926 ntBASIC3.73□□□□□ -1.81
Col3a1P08121 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Col3a1P08121 Gm26111-201ENSMUST00000083969 106 ntBASIC3.73□□□□□ -1.81
Col3a1P08121 AC115891.1-201ENSMUST00000215798 1755 ntBASIC3.73□□□□□ -1.81
Col3a1P08121 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Col3a1P08121 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Col3a1P08121 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
Col3a1P08121 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
Col3a1P08121 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Col3a1P08121 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Col3a1P08121 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Col3a1P08121 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Col3a1P08121 Gm26384-201ENSMUST00000102183 110 ntBASIC3.72□□□□□ -1.81
Col3a1P08121 Igkv13-87-201ENSMUST00000114214 286 ntBASIC3.72□□□□□ -1.81
Col3a1P08121 Gm14197-201ENSMUST00000117480 1049 ntBASIC3.72□□□□□ -1.81
Col3a1P08121 Gm12492-201ENSMUST00000117665 564 ntBASIC3.72□□□□□ -1.81
Col3a1P08121 Gm9119-201ENSMUST00000118866 495 ntBASIC3.72□□□□□ -1.81
Col3a1P08121 Gm14307-201ENSMUST00000118930 291 ntBASIC3.72□□□□□ -1.81
Col3a1P08121 n-R5s207-201ENSMUST00000122497 118 ntBASIC3.72□□□□□ -1.81
Col3a1P08121 Gm24385-201ENSMUST00000122694 350 ntBASIC3.72□□□□□ -1.81
Col3a1P08121 Gm14297-201ENSMUST00000129110 291 ntBASIC3.72□□□□□ -1.81
Col3a1P08121 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Col3a1P08121 Gm20651-201ENSMUST00000177219 329 ntBASIC3.72□□□□□ -1.81
Col3a1P08121 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC3.72□□□□□ -1.81
Col3a1P08121 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC3.72□□□□□ -1.81
Col3a1P08121 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
Col3a1P08121 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC3.72□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms