Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC4.1□□□□□ -1.75
Best1O88870 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Best1O88870 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
Best1O88870 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Best1O88870 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
Best1O88870 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
Best1O88870 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
Best1O88870 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.09□□□□□ -1.75
Best1O88870 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Best1O88870 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Best1O88870 Gm12760-201ENSMUST00000117861 482 ntBASIC4.09□□□□□ -1.75
Best1O88870 Gm13478-201ENSMUST00000118312 413 ntBASIC4.09□□□□□ -1.75
Best1O88870 Gm12252-201ENSMUST00000119517 219 ntBASIC4.09□□□□□ -1.75
Best1O88870 Gm7916-201ENSMUST00000120325 456 ntBASIC4.09□□□□□ -1.75
Best1O88870 Gm15166-201ENSMUST00000120790 385 ntBASIC4.09□□□□□ -1.75
Best1O88870 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC4.09□□□□□ -1.75
Best1O88870 Gm11229-201ENSMUST00000121993 437 ntBASIC4.09□□□□□ -1.75
Best1O88870 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC4.09□□□□□ -1.75
Best1O88870 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Best1O88870 Gm24061-201ENSMUST00000157489 120 ntBASIC4.09□□□□□ -1.75
Best1O88870 Gm26036-201ENSMUST00000158149 144 ntBASIC4.09□□□□□ -1.75
Best1O88870 Gm26028-201ENSMUST00000158660 294 ntBASIC4.09□□□□□ -1.75
Best1O88870 Gm22135-201ENSMUST00000158752 108 ntBASIC4.09□□□□□ -1.75
Best1O88870 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC4.09□□□□□ -1.75
Best1O88870 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
Best1O88870 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC4.09□□□□□ -1.75
Best1O88870 Mir3058-201ENSMUST00000175126 91 ntBASIC4.09□□□□□ -1.75
Best1O88870 Mir5101-201ENSMUST00000175181 83 ntBASIC4.09□□□□□ -1.75
Best1O88870 Mir6996-201ENSMUST00000183922 61 ntBASIC4.09□□□□□ -1.75
Best1O88870 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Best1O88870 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Best1O88870 Gm5372-201ENSMUST00000187540 409 ntBASIC4.09□□□□□ -1.75
Best1O88870 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Best1O88870 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Best1O88870 Gm37290-201ENSMUST00000195775 339 ntBASIC4.09□□□□□ -1.75
Best1O88870 Gm43115-201ENSMUST00000196244 160 ntBASIC4.09□□□□□ -1.75
Best1O88870 Gm43730-201ENSMUST00000199863 372 ntBASIC4.09□□□□□ -1.75
Best1O88870 Gm43367-201ENSMUST00000199986 625 ntBASIC4.09□□□□□ -1.75
Best1O88870 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC4.09□□□□□ -1.75
Best1O88870 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC4.09□□□□□ -1.75
Best1O88870 AC155929.1-201ENSMUST00000220217 1276 ntBASIC4.09□□□□□ -1.75
Best1O88870 Gm8231-201ENSMUST00000221617 783 ntBASIC4.09□□□□□ -1.75
Best1O88870 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC4.09□□□□□ -1.75
Best1O88870 AC154747.1-201ENSMUST00000225265 239 ntBASIC4.09□□□□□ -1.75
Best1O88870 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Best1O88870 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC4.09□□□□□ -1.75
Best1O88870 Gm10916-201ENSMUST00000080330 483 ntBASIC4.09□□□□□ -1.75
Best1O88870 Gm26446-201ENSMUST00000082455 103 ntBASIC4.09□□□□□ -1.75
Best1O88870 Gm25581-201ENSMUST00000083410 164 ntBASIC4.09□□□□□ -1.75
Best1O88870 Gm23850-201ENSMUST00000083830 169 ntBASIC4.09□□□□□ -1.75
Best1O88870 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Best1O88870 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.09□□□□□ -1.75
Best1O88870 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Best1O88870 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
Best1O88870 Gm44821-201ENSMUST00000208212 2002 ntBASIC4.09□□□□□ -1.76
Best1O88870 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Best1O88870 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
Best1O88870 Gm37903-201ENSMUST00000192122 2381 ntBASIC4.09□□□□□ -1.76
Best1O88870 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Best1O88870 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC4.08□□□□□ -1.76
Best1O88870 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
Best1O88870 Gm43668-201ENSMUST00000197014 5342 ntBASIC4.08□□□□□ -1.76
Best1O88870 Neat1-201ENSMUST00000173672 20771 ntBASIC4.08□□□□□ -1.76
Best1O88870 Gm22831-201ENSMUST00000102473 109 ntBASIC4.08□□□□□ -1.76
Best1O88870 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
Best1O88870 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Best1O88870 Gm13873-201ENSMUST00000119208 427 ntBASIC4.08□□□□□ -1.76
Best1O88870 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC4.08□□□□□ -1.76
Best1O88870 Gm25807-201ENSMUST00000122783 305 ntBASIC4.08□□□□□ -1.76
Best1O88870 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC4.08□□□□□ -1.76
Best1O88870 Gm5963-201ENSMUST00000143451 236 ntBASIC4.08□□□□□ -1.76
Best1O88870 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC4.08□□□□□ -1.76
Best1O88870 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Best1O88870 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC4.08□□□□□ -1.76
Best1O88870 Mir3104-201ENSMUST00000174911 63 ntBASIC4.08□□□□□ -1.76
Best1O88870 Gm22108-201ENSMUST00000177961 106 ntBASIC4.08□□□□□ -1.76
Best1O88870 Gm24798-201ENSMUST00000179334 106 ntBASIC4.08□□□□□ -1.76
Best1O88870 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC4.08□□□□□ -1.76
Best1O88870 Gm28399-201ENSMUST00000186221 318 ntBASIC4.08□□□□□ -1.76
Best1O88870 Gm29429-201ENSMUST00000187071 121 ntBASIC4.08□□□□□ -1.76
Best1O88870 Gm28572-201ENSMUST00000187444 318 ntBASIC4.08□□□□□ -1.76
Best1O88870 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC4.08□□□□□ -1.76
Best1O88870 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Best1O88870 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Best1O88870 Gm8790-201ENSMUST00000194108 322 ntBASIC4.08□□□□□ -1.76
Best1O88870 Trbv11-201ENSMUST00000194354 260 ntBASIC4.08□□□□□ -1.76
Best1O88870 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC4.08□□□□□ -1.76
Best1O88870 Gm43955-201ENSMUST00000204332 142 ntBASIC4.08□□□□□ -1.76
Best1O88870 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC4.08□□□□□ -1.76
Best1O88870 Gm44754-201ENSMUST00000208155 400 ntBASIC4.08□□□□□ -1.76
Best1O88870 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC4.08□□□□□ -1.76
Best1O88870 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Best1O88870 AC137842.3-201ENSMUST00000228855 2397 ntBASIC4.08□□□□□ -1.76
Best1O88870 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Best1O88870 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Best1O88870 Gm25853-201ENSMUST00000082793 132 ntBASIC4.08□□□□□ -1.76
Best1O88870 Mir34b-201ENSMUST00000083558 84 ntBASIC4.08□□□□□ -1.76
Best1O88870 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Best1O88870 Gm45131-201ENSMUST00000208051 2582 ntBASIC4.08□□□□□ -1.76
Best1O88870 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms